XLOC_039542 (gene) - C. hemisphaerica

Overview
NameXLOC_039542
Unique NameXLOC_039542
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_380:59104..60349+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039542 ID=XLOC_039542|Name=XLOC_039542|organism=Clytia hemisphaerica|type=gene|length=1246bp|location=Sequence derived from alignment at scaffold_380:59104..60349+ (Clytia hemisphaerica)
TCGGGCGTGACGGACGTGACGGAATTGATGGAAAAGATGGAAAACAAGGA
CCAGCAGAAAAACCTGGTAAAAATGGGGCTGATGGGATTGATGGAATAAA
CGGTGTAGACGGAAAAGAGGGAAAAGATGGGATCCACGGAAAGGACGGAA
AAGATTGCAAAATGGGAATGCGTGGAAGAGATGGGTTAAACGGAACAAAT
GGAAAAGATGGAATGGATGGAAAAGACGGAAAAGACGGCTTAAATGGAAT
TGACGGAAAAGACGGCTTGAACGGAACAAATGGAAGGGATGGAGTCGATG
GAAGGGACGGGTTAAACGATTCAAATGGAATTGATGGATTAGACGGTATA
AACGGAGCAAATGGAATGAATGGAAAAGACTCACCGAAGAGACATTGGAA
AGAATGTGCTTGGGACAAAAGCTTTTATAGTGAACTAGATGCAGGTCTTC
TTAAGGTATGTAAAGCACTTTAAAATTGAATTCATGGTAGATAAAACTGT
GTTGTGTTTTTGCTTGATAAGATCTCTGATAACTAAAAatattagaattt
caaaaattcagtaTTTCAAACATTTCGAAAAACATTTCGAGGCGATCAGT
TTTTCTGGGTGAGAAAAACATTTGCTTTCCATTTTGGAACTTAGAAATCG
TTTGAttgtgaataatttttttctcccgtTTTACAGATTTGCACGTTCAG
AAAGAAATCGATTGAAACATATTTAAGGGTAGAGGTGATTTCAAATCTAA
GAATATGGAATTGTGATGATTGCTGCAGCCGATGGTTTGTCACTTTCAAT
GGACAAGAATGTACACCCGTGCCGATAGACGGTACAGTCTATATGAAATT
TGGTAAAGGAAATCGTGAAAAGAATCTTCACCGACCACAAGTTATTACTG
GACGTTGCAAGATTTCGAAAATTGGTTATATCAATGTGGGTTTCAATGTT
GGTGAATGTGCAGGTGCAGGTAAAAATACCGCTGATGCGTTTACAGGGTG
GCAACAGGCAACACGCATTTACGTCGAAGAAATGGAGGGGCCACAGTCTG
ATCttgtttcataaaaaaatcaatacTAGTTTTCTCTAGCGggttttata
ctttttttatttgtaatttAAGGGGAaagatcattgaaattttttttttt
aatgaaattatttGTTTTCAAGATGTAACTTCTATAtcattttatcatgt
ttttatttagttttatcatttgtattaaaaaaagcTTATTTCAGGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063125TCONS_00063125Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063125-proteinTCONS_00063125-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_380supercontigscaffold_380:59104..60349 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CTHRC1collagen triple helix repeat-containing protein 1 isoform 1 precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.14	0.88	0.5	0.56	0.87	0.97	1.49	1.56	0.74	0.57	0.5	0.25	0.11	0.15	0.83	0.06	0.13	0.52	0.11	0	0.14	0.06	0.26	0.24	0.84	0.99	0.36	0.74	0.15	0.26