XLOC_039656 (gene) - C. hemisphaerica

Overview
NameXLOC_039656
Unique NameXLOC_039656
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_385:270072..279044-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039656 ID=XLOC_039656|Name=XLOC_039656|organism=Clytia hemisphaerica|type=gene|length=8973bp|location=Sequence derived from alignment at scaffold_385:270072..279044- (Clytia hemisphaerica)
GAAGAAAGTAGTTGTTTTCGTTCCATTTTTTGTTCCGACTTCTATTAGAA CAGCTATTGTCATGTTAATATTTTAAAATAATATTCCCTTTCATTTTCTA GAGCTCAAGGTATTCTTAAACCACCTATAGACGTTTTCAATCAGAATCCG CCCATCAGCGCCCTTCCGCCTAAACTACCAGACACACTGGGTGAACTGCT TGCAGAATACAATCTTCAAATGTATTTACCGAAGCTGGAAGGTGAAGGGT TGGATGTAGCGACATTCTTGGAACTATGTGATAATGATTTGAAAGAATTG GGAATTGAGTAAGTTGTTGCGCTCTCTAAGGCGGCGGTTACACAGAGCCG GGTGAAATTTTGAAAAATATCACCCCAGGTAGAATATCACTATGGTCTTT AAGACAACACTCTTTCTGTATACACATATTTAGGCGGGGTGAAATCGCTT TTTTGGCTGGGTTAATTCCGCCCGGTCCTGAGGACCGGATTGAAATTTTT TTATGATTTTTTTTGCAAATTTTTGAAGATTCTTAAATGTATGCACAATT TCTTTTTTGCACCTGGAGTGAAAATAAGTTGAAAAAAAAACTTCTTTTAA TTAGTAGAGTGATCGAATTAAGCAGTCAGCATATAGTTTAAACGTGATTG TATTTTTCATATATCCGAAAAACGTCTTTCATGACATTCAGAATAATTTG TTCACCTTTATATCCATCCTTGATTATTTTCCCCTTTTTGCTTTTTCAGT AAATTCGGACCACGTAAAAAGATGTTGTTAGCAATACGTGAATGCAAGGA ACGAATGGCTGTTCACGACCCTAACGTAAGTCTTTTCAATCTAATATCTC AAGAAAAATGTTTTCTCATTTCAAGACTTGATTTACGAAATGAGCTCTCT GCCGGGGCAAACAAATGCATTAAAAAGTGCTAGCTCTATTGTAGTTGTGC TGTACAGATGTATGAAATTTTGCTGATTTGATCCAGTCTAATGTCTTTAT TTTCATCTTCCAGACGACATTTTTATTTCTACACTTTACTTTCCATCCAC AGATCATCTATAGATCCCTTCTTTCGATTTATTTTAACCCTTTTAGTACC ACTGCTTTTTTGATTCTCTTATTTTGGAAAATTGTTTAGCTCGAAATCTT ATTGATTGGATAGACGGGAAAGGTGCCCATTATGAAAATTGAGATTAATT CACTACAAGATGGAATCGAGTAAAATGTTAGACGATCCTATCGTCTACAC AAGATCACTGAAAAAGGGAATAGTTTAGGAGAGGCGTGATAAATTCGGGT GGAGTAAGCAGTGGCGGAGAGGTTTACAGTGTAGACGATACCAATTTGGC GCAAAAGAAAAAAACTGAAAAAAGTCGAGGATTTGCCTTTGCGTATTATT GACGATTCGGTTCAACCATTTTCAAAACATTCGAAAGCGTAACGTACAGT ATATCCACTCTTATTTTTCTACACTGGCTGAAGGAATTTCTTGCATGAAA TTCTTCTCTTTATGGGTTTATTTTGTAGCTCAAATTTAGAATGTTAGTTT GCAATTTATTTGCAACAAGTATTTAAATTTTAAGAGCCATGCTTCATATG TTTGACATACTTCAGAAATAAGTCACCACAAAGACTAACAGGTTTGTTGT TAATATTTTTTACTTCCAACCTTCATTTTTCTTCTTTTTAACTACAGTAA TTTAACTCAAAGACACCACACTTGCTGTACATTTAGTATCATTGTACACA TATCCCTTCTGATAAAAACAGCTTTTTACCTTCTTTTCAATACTCCCTAT TTTTGTTTTGTTAGAAATTCTACAAGTTACCAATTTTTAACTTTTATATT TTTTATATTTGACATGTTCAGTAGTATAGAAGTATAATTATAGCCACAGG AAATCATTTTGAAGTTTTTAATTTTTGTTTGTCTGGNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNATACAAAAAATCATTACAGGAT AGTTTGACAATTGAAGACAATTTGTTTACAATATTTTCCACCATACATAT TCTATATTTAAAGATGATTATATTCTGGTCTTAGGTGGAAGACGTTCATG GTACAGCAAGATGCTGTTATTGCTACCATACAGTGCTACTTGAAAGTCTT ATCCAAATCCTAGCTGGAAAAAATGATTATCTAAAAAAAGATAAAATATT TTATTTTCTCAGACATATCGTACTACATATTCTACAAATGGCCTTTCAAT TGCTTTTAATCGGCTGATTGGAGTAAAAACTGNNNCAGTAATCTCTAAAT TAAAAAAAAAAATTTTCCTGATTTCCTATATAAATTTTTAAAAATAAGGA TAAAATTTTAGTTTTAGTTCTGTTTTGCTAACTTCTTTATATAAACATTA TACTGTCTGCTATTGCGAAACCATATTTTACATTAACTTANNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNTTTACTGAATTCTCATAGTGATATGTTTGTAAAA AATCTGTGTCGGGTTTGAAAAATCAAAAGAAACGGTCGCCAGCCGCGACA AAATTACGACAAATAAGTCCAAAAACGATCATTTTCAGTCATAATACTGT GAAAATTTCTCCAATCTTGTTCAAATTTACACAGGAATTGTGTTTTAGTA TCCTTTACTGAATTCTCATAGTGATATGTTTGTAAAAAATCTGTGTCGGG TTTGAAAAATCAAAAGGAACGGTCGCCAGCCGCGATGAAATTACAACAGG TCCAAAAATGATAATTTTCAGCCATAACACTGTCTGACTGTGAAAATTTC TCCAATCTTGTTAAAATTTACACAGGAACTGTGTTTCAGTATCCTTTATT GGATTCTCATAGTGATATGTTTGTAAAAAATCTGTGTAGGGTTTGAAAAA TCAAAAGGAACGGTCGCCAGCCGATGATGAATACGACAATAACAAAGTCC AAAACAGGATCATTTTCAGCCATGGATACATAATACCACAAAAAATACTG TGTATCAATGGCTGTGTGTTTGAAAGTTTCATTGTCAAGTTTGAAAATCC AAAAGGGACAACCACCAATTAAATTATATCATCATGAAAAATGTCCAAAA GTCCAAAATAGATCATTTTTACAGCATAAAATCATGAGAAACACACGTAT TTGAATTCAGTATACAGTACAACGTACAACGCACCATCAAACTTCTCATA AATCATGTCCAAAACATCATGAATAAGGATGAAAATGATCAATTTTTCAC TGAGATTTGCCAGTATACGTGCCAGTATTTGCTACACAGTCAGCTAGTCC ACTTTCGATCTGTTTCGATAGCCATCTTTTTCTAAATACTTTTCGGCCAA TCAAATCACAGTATTATCGGAATCAGTGATCCGTTTTTGTTAAATCGGAA TAGANTTAGCTAACCATTATTTTTTTCTGCTGGGATAATACTTGGAGAAG AGTAGGATAAACCAAATAAAATGGTACAATAGTGTGTATGTAATAAATAG TGTTATATTTGGAAAAAACCTGTNAAAAATGTCTTAACCCTTGTCGGAAG AGAGAATTAAAGGCTCCTAGGCCGGAGCAAAAATTTTGTGGCTGAATGTC TTGACCTGTAGTAGAATAGTAAAGGAAAAACAATGTTTGAGAATGTGTAA GTACAATTTTTACATTTTACCCTAACCACAACAAGTAGAAAACAACAAAT TAGTCACTTATATAGAAAAATTTCTCAAAAATTAAATAANNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNTTCATTTAACGTACAGAACAATTTTCCAACCACGTTCTACT GGTTCAATTTCACAAATTTCACAAATTACATAAAATAACACGAAATAATT TTATAAAAAGTTATATAAGCAGTAGGGAAACTTATTACCAAAACCTTTTT GGTGACTTCACAAAAACATTTTTGGTTAACTCTAGATATGCACCATTGTC TTCCACAGCTGATTGGTTGAAAGTGACGTATTGACTTATTTTACGTCACT TACAACGAATCACCTATTGGGTACGTGATGTAATGTCAGAAGACCTTGGA ATGGCACATATCGTGAATTTGCAGTGAATAGGTGCAATCCATTGAAGTGG CAATCTGAACACCCAATAAATAAGAAGAATTAGAATTTGTAACACCAGTT CTAAAAAATTCTATTCATAGAAACTTGGGGAAATAAAATACTAGATTAGA AACAAACATGAAAAAATTTACATGAAGGAAAGTATTTTCAATCAAAAATC AAAAAGTAGTTTGAGGTATAAAGTAGTTGAGAAGAGTGAGAATATGTGAA AATTATATGCTCGTGCTCATAAACCACATAAAAGCACAAGCTGAAAATTT TAAGGAATGGAAAGAATGGAAAACATACCTGATTAAAATGGAATCTTGAG GGGAAAGTCAGTCAGGTTGTTGTTCATCATATTCAAAACGATTTTTCCAA AAGCAAATCTTGAGGAATCTAATCCCTACTGACACACTAAAGACTTATAT ACTGTACACAAAAATTCATGCATAAAATAAAAGACTAATAAAAGTAGAAA TTGTTCTCCACCATGAAAATAAATCTCATAAAAACAAAAGAGTGAAATTT CATCAGCCATCTTTCTCAAACTTTCAGCTGTTTGCACTCACTTCGATCAA AAAACGCAAACGGAAAATCTCGAAAACCCGCTGACCTCTCTCAGAGGTCA GTCAGGCAAGGATTTTTATATTGAGGTGCGCCAAATTGGTATCGTCCGTT TTGTTCCAAAACTCTAACTACCGCCACTTTTTTCCCGTAAACCGCCCTGA CTCTTTCTCGCATTTACTTTAAACGGACGATAGCATCGTCTAGTAAAATG TTTGCTGGTTTTTGTTCACTCTTTGACCCTTTGGTCGAATAACAATAAAT AAAACATTCCTTACGAAATTTTGACCAGATTTTGACTTTGACAAATCCTT TTACAATATTTTTCTCACCATGAGATCAAAATCTTGGTCGAAGTCTCAGT CCAATGTCTTCCTTTACATCTTCAAACTACATTTTTATTCACTTTACTTT CCATCCACAGATCGATCAGGTGCAAGTGGACCAATATCAAGTTCGTATAA GAGATCTAACAATGCATTTACAGCAGGTAAAATGTTTTAAAAAATTCATA ATGAGAGAGCTGTGATACGAGCCCTCCCCATTGGGGGAGGATGATAGAGC TACATTTTTGTATACACATTTTATATAGCTATGAAGTGACAAAATGAATT CTTCACTTACTGAGAATATTAGTCTATACCCCTGTCTTTTGAAGCATGTG ATTTATCTCCCAAAAGCGAAGTTCCCTTACCGAAAATCTTACAAGAAATA AAAATCCTAGAGACAATAATAAGATGATAAGTTTTCGAAATTGGCTCAGA AATATTTTAAAGAATAACTGGCTAAAATTTTGATAAATACACTCTCTTGA TTTTGGTACTCTAAAACAAATTTAATGCACGGGTTTCGAATTAAACTGAA TTATCGTTTTTGAGTTTTTGGCTGTTATAGTGACCCATACAGTATGCCAA AATGGAAAAATTAGCTAAAATCGCTTGTCGCACGGCCACTGTTTTGTTTA TATGATTTTTGTTCGTGCAAATTACATGGGATCAAATCAAAAGCTACGCA AAAATCTAATTCGAAATCCGTGTATTTACGTTGCTTTGGACTACCCGGTA TCATAGCTTGGTTTTTGTTTCCTTCCAGGCGCTGGCATACTGTAAGAACT ATCAAACTCAATTATATCAAGAACAACAATACCGTCAAGAGTTTGGTAAT TATCTTGAAGCAGAAGCACAAAGAATGAAACAAATCTTCTTTTATTCAAA TAACATTGGAAAGAATTGTAAAGAAGCAAGCGCACAACTTCGAAAAATGA AGTACGGTGATTTTTTATTTTTTATTTTTCATTTGAGCCCTAGGAATGAG TACTTTCAGCCCCGCTAATTAAATTTTCGTAAATTTCCAGCCAGGACATT CTTATTCTAACCCCTCCGCTTATTGAGTTTTTATTACTCGGGGCTTCGCC CGAGTGGTCTATATAGTGTCAGCAGCCGAAACCATGGGGTTCCCAGTTCG AATCACTGCTCGTTTCATGTTTTATCAAATATCGGAGAGGCCGGCTGTGG CCCAACTGAAAACAATTCAAAGACTGGCCAAAAGTCCTTAATTACCTGGG CTATCGAAACGTAAAATTAGTGTATTTTAGCTAAATCTCTAGCAGCATTT TCTTACTAAGCTAACTGACTTACCTTTGCTCACTATAAAGAAATTAGTTA GCTGTCCTAACAAATAGATGTTGATTTACTAAAGCAAATATAATTTTATT GGCAATACCGAAAACATTAAAGGTTTTGTTTAAAAAAAAAGAGTGATATC GTTTGCTTACTCATCATTTTTAATTAACAAGCTTTTTGATATTGAATCAA CACGGATGCGGGGCAAGATCGGTCAGAAAGAGGAAAAGATAAACAATTTT TTGTTTATTCAGCACAATATAACAATAGGCAGACACTGTCCCGATATGAA ACATGTGTTTGATATGAAACGGGAGCACTCTAGCAATTTTCTTTCGTTCT TCTAGGGAATACATCAACCAGTTCAGCATGTTTCTACAAAAATTCAAAGA CCATCCGAACTTTTTAAATCTTTCAAACGAACTACATATAGACACTTCAG TATTTGAAGCTGTGAAAAATTTACAATGTGAAGTTGAAATGGCTGGTAAT CGACTTGACATGACTTTTAAACAAGTTGAACGCACACTAATGATAGCTCA ATTGGAAATTCCTAATAATCAACAACAACTACAACAGCAACCACAACAAC AACAGACTGCAAATCCTCAACAGCAACACCAACATCNTTACAACAGCAAC CACAACAGACTGCAAATCCTCAACAGCAACACCAACATCAACAACAAGCT CATCCTCAACATCACACACAACAAAATCCTCAACAACATCCACAACACTT TACTTCTTAAAGAAATATCAACATTTGTATCAGCATCTTTTAAAAATAAT TATTGATAATAAATGAATCCTCAGAAATATCAGTTTTGGCAACAAGTCAT TCCTCAACACCACATCAACAGCATTTACAACATGCTTCTTAAAAGAATAT CAACATTAACATCAGCACCCTTCAGAAATAATTATTGATAATCAACAAAC AGCAGAATGAAAATCCTCACACCAGCATTGACTAGTCATCCATCTCAACA AAACACTCAACAATCTCCTCAACAAAACACTCAACAATCTCCTCAAGAAC ACCCAAACATTATGTCTATTAGCCACCATGCAATGATAATCAACTTCATA CCGTATTAGCAACAAAAAACCTTGCAATCACCAACAAACTTCTCCACAAC ATCCACATATTATTGTGATATATCAACATCATCAATGAGAGACCAGGAAT AGACTGTCGATTGTCATTAACATATGATCTGGTTTGGAGAACTGATTATC GCAACAACAGAAGTCTGATATATCCTCCATCCGAGTCTTAAGTATTATCC ATCTATTGGCACCTATCAAACCATTATGTTCACGATCACTATAAGTTCTA GGATATCAGGATTTTGATGCAAGATAAAATTCGAAGAGTATTTCAAATAG AAGCTTTTAAGCATATACTTGTTGTTTTTATTCGTTTCTCCAAATTGACA ATTTTTAAGATAATTTTTTTTTACCAGCACTTTATTTACCATATAAATTA TTATAACAATTATAATAAGATATTTTTAATTCGAATATTTTTTGTCCTGT TTGTAAGCCTTTTTGCATATAAAGGAAGTTCTTTATGAATTGGGTACCTC ATATTCCTTAAAATATTGAAAGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063279TCONS_00063279Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063279-proteinTCONS_00063279-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_385supercontigscaffold_385:270072..279044 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.24 4.18 3.3 3 21.46 16.76 25.15 26.8 15.59 22.27 13.7 10.09 15.77 12.93 16.34 18.41 11.98 10.65 10.47 17.37 6.66 6.27 8.81 10.66 6.44 10.33 12.36 8.24 16.29 15.7