XLOC_039662 (gene) - C. hemisphaerica

Overview
NameXLOC_039662
Unique NameXLOC_039662
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_385:438214..445337-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039662 ID=XLOC_039662|Name=XLOC_039662|organism=Clytia hemisphaerica|type=gene|length=7124bp|location=Sequence derived from alignment at scaffold_385:438214..445337- (Clytia hemisphaerica)
TTGTCCTACCAAGTTTGTTGGTGGTTGGTATCTTGTTGATGGCTATTATT ATGATTTTCTTCACATTCAAAGAAACTAAACCACCACCAAGGTAAATCGC GTTCTTTCAAGAGAGTCAAACATCATTTACTATGAATAATATCTACGGTA ATTCATCAATCGCGTACCCAGAGCCACTTTCACCACATTTTGGTCGGATG AACTCTTTTATTTGATACACCATCCTTTTCCAAACTCGAAAATTTATTTA GAGTCTAAAACCATGTTCAGACGTTATGGTTCCGTATCGTTCCGAAACGA AACGATTTCGAAACAAATGTGAACGCCAAAATTTGAAACGTCAAAAAAGA AGACGCTGCAAAGCAAAACAAATCGAAACGGTTTCGCTCCACTATTTTCA TTGGAATGGAACTGCTCTGTTTTCTTCCTCCGAAACGTTCCGAAACTAAG AGCCTGAACCTTTCATGTCAAAAAAGTACCGAAAACANATACCTGAAACA CCGGCAAGTTTCTGAGCCATTCAGTGTTTCGCTGGTGTTCAAGGTGTTTT TCAAGGACGATTTTGAAGCTCTTGCAGTGTCATGTTGGAACCAATCAGAT AAAAATCGGGTTAGAAAATCGGGAAAAAATCGGGAAAATTAGCCAGTCGG GACTTTTTTAACAGTCGGCTTCAACAGGACATTCGGTGTTTTTTAAAAAC TTTGAAAACTGAACCATTCGTGACCAAAAGTGTTTTCTGCAAACCAGGTA AGCAATGTGTTTTTAAAGACATGAAAGGTTCAGGCTCGAATATGAACACA CTCGATCCGTAACGGAAATCATACCGGAACAATACGAAGCCGTAACGTCT GAACATGGTCTAAAAATTCAAAATGAATTCACATGCTACTCAACTACACC CCTTTCTCAGTGCCCCGGTGAAACTTTTTACCTCAGTTAGGGATGAAAAT TTCTATCGAAATACCAATTGGGGAGAAATTATATTTTTCTGACTCTGAAA ATCAAGTTGAAGTGTCTTAGGAATGCAATTTTTTCATTGAATTTCGAGTT GGAATGAAATTAAAGTCAATATCTCAGTGGACTGAAAATTTGGGGTATCT ATCACACCGGTAACGAGATGTAGGCCATAGATTTTCCAGTGGTTTAGGGG GAGGGATTCCACCAAGTCTGCGACACAGGGTTTTTTAACTGCTCAACCTC TTTTTAGTATCGCAACCAAAGAAGATAGTGAGAAAATACCACTCCTAAGC CATCAAAAGAATACTTCACCANACAACCGAAGAAGATAGTGAGAAAATGC CACTCCTAAGCCATCAAAAGAATACTTCACCAGAATCAACATCACCAAAC GAGGAGAGCAGATTTTACATCGAAGACCAACAGATACGAGTCTCCTATAT CATCAAACAAGAAGAGGATGGATGTTTCAAGAAATTATGTTCCAAAATTA AGAAATGGTCTTTATACGAGCTGATAACGTAAGTTAACTTCCCTGCACTT TCAACCCAGTATGATTCAAACAAAACTTATGTTAGGTGGATAGAAGTATA ATTATTTCCAAAACTTCTTTCAAGATTTTCAAATCATTTAGCAAAATACT TTATGACTTTTTGAGGAATTTTTGTGATTTTGGAAGCACTAACACAGAAT TGATTGCCTCTTTAATAGTGGCCGGGTAGCTCAGTCGATAGAGCATTCGC CTTACAATCTAAGGGGTGTGGGTTCGATCCCCGGTCACTGCCAACTCAGC GGATGAGTAGCTTAGATTGGGTAATCTGATGTAGGCGGTAAATTACTGGG AGATGAGAGTAGGTGTGGCGCTCCACCTCAGCATTCGATATCCTAGGTCT AGCGCAAATAGAAAAGGGGATAGACTACCTCACTCACGGCTCCGCCGACA GCCACCAGATGAATATACTTAACTTATTAGTCACTCTGCCGTCCTCAAAA TCGTAGATACATGAACTCGCTAATTCTAAATCTAATACAGTATTATGGAT TCTTTATTTCAATTTTTATAGAGATAAAACAGTGATGTTGGTGACTATGA TGTTTGGTATGTCAGGATTTTGTATCATTGGATTCTCAGAGCTCTCTTCA CTATGGATGGCCACTAATTCAAAATATGGTAAGTAATGTAAAATTCTTCA ACTTTTAAGCTTCTTGAAAACTTTTTAGATTTTGCTTCTTTTTGATTTTG ATTTTTTCTCTATATCTCTAGGCTAAATTTAACGTTCATTTTATTGTTTA AGTCCTAGACTAGTAAACCACGTCGTTGTATTTTGCTGCAGATTAAACTT GCAATATGTCTATATGTTCACTGAATACCACTTTCCAAACCACTCTCCCG CAGCCTTTACTATTTTTTATAAGAACTCTTTTTTATAAGCACTATTCCTG CGTTTCTGTGTCCAAGGGAAAATAGGCGCTTGCTAGTGTAGTTCCCTTTA TAAGTTGCTTCCAAATAAAAGCATTTTAAGATTTCCGAAATTTTTTAATT TTTTTTCATTCCTCTTATTTCAGGTGGTTTGAATTTTTCAACAGATAAGA TTGGGACAGCACTTCTTGTACCTGCGATTGTTTCAGTCATCATACAACCA ATTGTTTTTGGAAGGGTGAGTATTCTTACCGGATCTCTTATTTTGATTTG TTCTCTTCTTTCTTTTCTTTTTTATTTATTTTTTTTATTCAGTGAAATTC CACTATTGAATATCATTTCGACGAGCCCAAAACCGCCATTTTATTTAAAT TCAATAAAGAAATACAGCCTTTTTGTCTGAGATGCCTTGGAGTTTTTACA AGATACTTCACTAATTGGTCATTTAAAGTGATAGAGATGACGCGTTCTTT AGAAAAAGTAATGAGATTCTTTTATTACATCTTAACGACCAACCAAATCA AATAGGAGCTTGTAAATACTCCAGCTTGTCCCTTTCGTCTCCGCTACAGA TTATATTGACACAGACTTTAATTCTCTGTATATTCCCTTACGTCATGAAT TATCTTGTTTTATTTCTTGCTTGTAGTTTGAAAAAAGATTTGGTGGAATA AAGGTAAGAACGAGATACTATTTATATTGGCCATTTCACAGTCGCAAAGC GTAATGGGTAATCAGGACCACTGCGCGCTTATGACGACTTGGTACAAAGT TTAGATAAAATTTGAAGATTTTTGCGTCTAACCAACAGGAAACCGTTATC GGGGCGCAATCGGTCCTGATTACTCATGATACATTTCGACTGTGAAATGG CCTATAGTCTATCGGTTTCAGATCCATGTAGTCTTATAAAGCAATTATAA ACAGTTACGTAGAAAGCTAGACTAGCAAACTAGTCTGTTAATCAATCATG TCAGAGGGCGGGAACATAAAGGCGGCGGACGTTTGCTAGAATAGGAGCTG CGTAGGAGAGCGAGCAAAACTTGGTGAGAGGGTGCTGATTAACAGACTAG AACATTCTGCCATGGCTTTCAGCCCTTACCACGGACAAAATTTCTTCCTA CGCTTACCTAACTCCTACGCTCACCTTTCACGTGTGATACCGTTCAAGCC CGACTGGCGTGCCAGTCTAGTAGAAAGCGTACAAAGAACTTGTTTTTAGA AAGAAACTAAGTCTAGGATGAACGTATAAACACTATCTAATACGAAAATA TTATTTTCTTTTAGACATTGCAATTATCACTTTTGATATTGGCCATCTTC ACTTTCTTCTTCCCTTTTATACACTACACTATCAAAAGGTATACCAAATT AAACTCATCTTTAGGGAGGAAATATTTACGGAAGAAATGCTGAATTTAGT TTCACGTGTCTTTGGGGCCGTGGTAAATAGCAAAGCAAATCAATTACAAT AAACTCTCGCTTATTCGAACGTGTATTATTTGGATCTTTCTTTAATTTGA ACTTATTTCCAATCCCGTGCAAGGAGAAACCCTCTTAATATGCTTTCTAT AATTCGAATCTTTCTGTAATTTGAACAAATAAGATTCGCCGTTCAAGTTC GAATTAGTGAGAGTTAATTAGTCTCATCTTTTTGGACCTTGAAAGTTTTG TGAAGAACTACTACAGAAGGGGTAGAGTGGTGTTAGGGGTAGGAAAAGGG CATTAGCATAGCCCAGGTTATATTAGAGATTTGGGAGAAGCTATTTCTGT GAGTGACGCAATTTTCACAAGCCAGCAACTTATAAAATCTTTGGCAAACT GAAAAGGTGTTTAACTTCTGTTGTAAAATCTCGTGGAAATTATAAAAAAT CCATTAGACAGGGCTGGTCAAGTTTTTTTTCAAACATTAACATACTTTGA AACTTTAAAATCAATTATTGAGGCACCCAAAACGGATTTCGTGATTACGT GATTTGGAAATTTTTTTTTTCGTGATTGCGTGATAAAAGGTGAAAACTTG ATGGTTATTTGAAAGGTTTTTGAGCCATCATGCGTGATTTTTTGCTGATT TGCGTGATCACGAAGACAAAAAATTGCATGATATCGTGATCAGAGTTACC ACTGGGGGCCTTATTATTCCTATTATTCTTCGTAAAAATCAAAACGGTTT TCGAAGTGGTCGTTCTACTTTAAGCCAAGTTCTTGCTCTTCGACGAATCT TAGAGGAAGCTAGAAACTTCAATCNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNCCTGGGCACTGCTATGCGCAACCGCGACTCCTGGCG CCAGCGAGTGGAATCCATTGTCTCGACTGCGGTCGAGCAATGATGATGAT GATTATTCCTATAAATTAAGCCAATAAATTCATTGATTTTACAGCCGAAA ACTACTTTGGTCATTACTCATAACCACTGGAATGGTCCGAATGATTGCAG ACATAAGCAGCCGTTCAGCTTTAGCACTTTTCATCAACAATTCTGTCTAC CCTGAACAAGCTGGCCGTGTTAATGGATTTGCTTTCTCTGTTCAAGAAAT TATGAGGTATGATTCAGATCATTTAATACATAATATACATTAGCCTGGAT ATCTAACCTGTATATTTTGATGTTTCTGCTATTTACAGCTTGGTCTACCT ACATGCTGGTAAACCTAGGGTTGGTAATTTTGATTTGGTTCTTCCAGAAA ATGTTCGATTTTTGATTTTCGTGAATTTTGGACCCTTATAGAGACTCGAT TTGCTTTTAATTGGTTTTATACCTCTTTGAGAGACTTTCGAGAGTGTAAA AAGGGACCCTTATGACCCTAATTTCCGGCACCGAACTATGGCTACTTATT AAAAATGGCGTAATATTTTTTTTCAGCTAGGGACGAAGATACTCCAACTA GTTTTTTATACAAATAATATATTTTGTGGTGAAAAATTTCTCTGGAGTGG CCAAGGCAAATATGGCGCCCTTCTGAAAGTTTTTTTGTTTTTGGCGCCCC TCTCTATACGCTCATTTTACTTACGAATACAAAAAACTAAAATCATAAAC ACAAACAAGGGAGTGTGCGAGCGAAGTGAGCCAGAAAATTTTGAGTTTTT GAGGTGATGAGGGGCGCCATCTTTGTTTTTTTCATTTGTCAATCTTTCGA TATGGGCGCCTGAAAAATCCTTCTTGACGCCCCTTATTTTTGGGTGCCCC TTCTCAAAAGGCTCCGCTGGGGGGGGGGGGCCGGGCCCCCCCCCCCCCCC GGGCCCCTTTTGGGGGGGTTGGGGGGGGGGGGGGGGGCCTGGACCCCCTG CCACCACGCGACCGTTTGTGGTGAGTTAGGTTGAGGGAGAGGTGCTGTAG GTTTTAAGAATTACATAATGCATTGAATCGAAAGAAAAAAGAAATGAATC TAAAGTGTGCATTTTGAAGCAAAAATTTGTCTCATTCTTATCTTTTAGAG TTGCATCACCGACAATGTTTGGTGCATTATTTTCATGGGCCATCGATTCT CAACAACACCAAATCATCTTCCCAATCGATTATAGACTTCCGTTTCTAAT TATCGCTTTTGTTATATTCGGTATATTAGCATTAACATTGTTATTACCGT TAAGCATCAATGGAGCAAAATCAGTCAAAGATTCACCAGAATCATTGAGA CCAACAGAAGTCGGAAATATATCAACAGCTTCCACATCATCTAGCTTTAT GGAACATAATAGGACTTGATGTAGAAATCATGTATACGGTTTGTTTGGAA AGACAAAAATCTGAATTCTTTTACACGTTTTTTATGAACATCCAAAATTT TTGAAGCCTTCAGATGTTCTTAACTTTTTGGGTTTCAATATTTCAATATT CAGCATTTTTTGAGTATTTTTGCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063289TCONS_00063289Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063289-proteinTCONS_00063289-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_385supercontigscaffold_385:438214..445337 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.07 0 0.08 0 0 0.07 0.09 0 0.03 0.07 0.1 0.16 0.39 0.75 0.66 0.48 0.51 0.6 0.11 0.38 1.85 2.27 2.5 3.37 5.63 6.43 12.38 10.74 17.66 12.41