XLOC_039697 (gene) - C. hemisphaerica

Overview
NameXLOC_039697
Unique NameXLOC_039697
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_386:69891..74275+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039697 ID=XLOC_039697|Name=XLOC_039697|organism=Clytia hemisphaerica|type=gene|length=4385bp|location=Sequence derived from alignment at scaffold_386:69891..74275+ (Clytia hemisphaerica)
ATTAGAGAGACTAGCAGagtaaagaaacaaaaaatggccGGTATcgctta
taaagaaaatttagCTAATATTACTGCTAATGTATTGGCTTTGAAAGCAC
AACCAATCGATCCGACCAAATGTACTCCAAACAAATCATTGTATCCGCAG
ATTCTCAATAACAGTCAAGCCACGTCAGAAAGACAAGCAAAACAGTTCAA
TCTGGGCAACACACATTGTACAGCGAATCCAATCGTTGCAGCCGACTTCA
TTCTCGAAAGGGAATATGGTGATAGTTCACTTTTCGTTCAAAATGAACAT
ACAAGCGTTTTTATACCTCCATTTGTTTCAAACCAATACAAACAATCTTC
AGCTGNCATACAAGCGTTTTTATACcaccaatatttgtttcaaACCAATA
CAAACAATCTTCGGCTGCTTTACTAGAATATAACATTGACAAAGATATTG
AAAGGCTTTTGGTTAATTTGAAACAACATTCACCAACGTATTGGCTGACA
AAGGAGTTGGAAAGTTTTATTATTACGCAAAATGGTGCTGATTGTATTGA
TAAGAAGGCTTTTGACCGATGGATCTTAAACCTTCAAATTATGTATGTGG
TTATTCTAGAACTGAAAACTGACCAAGTAAACCTACCATCAACAACATCG
GAGTTGGGAATTTTTCTCAACTGTAGTATCgcagcccagctggcacacaa
cgttgtttaaacgttcatctaacgttatatggacgttgtgaacgttaaat
aaacgttgaaacaacgttttgtgccagctggcAGTGCTACCTTTTCCGTC
GCCTTTGAAAACACTTCTCCAGCAAAATTGTTTGGTCAATAACCTCAGGA
AACAAGTTCAGCAAATGATTGAGGATAAGCCGAGCCAAGATTCAAACATC
CAATGGCTTTTCAGATTGGAATTATCTAAAATTGGTGAAAAACTTGAACA
TTGGTTTTATGACCAACTTTTACCATTAAAAGATGACATTCTCCAGGATA
CAGTTGTTCTTTCATCGCTTACATTCTTGACAAACTTGAGAAAGAAAATG
CATAAAGAAACTGATTTCATAATCATCGCTTGGCAAAGGAAACTCGTTAT
CTCCGTTGAGCTGAAAAGGACAATAGTCGATGAGAAAGTCTTTAAGCAGT
TGAAATCGAGTCATCAAATCTTTGAGGAGAGACTAGGAGACCAATTAAAA
TCTGGTTGGACATATTTTCCGGTTGTCGGCGTTGAAAATGACAACTTCAC
AGTCAACAGCCAGCATTTTATCACCATGAAAACTGAAATCAAACCCTGGT
TGACCAGTATCTTAAACAAATTCCAGACAGTCCAGACAACGCACATACCA
AGTCCTTTGGAGGAAACTAAAGATCTCCTGAAAATGCTAATCTTTGCCAT
TCACGTTTCGAAAAAAGATCAACCTCCAATTACAAGCTCAACTTGGGTTG
AATACACCAGCAACGCTATCGAAAATGTGTCAACCAGCCACAACATTTTG
TTCCACTCCAACCAACAGATGGCAATAATGAACAACGATGATCTACGCTA
CAAGAAAGTGATGATTCATGGGCCATTTGGTGGGGGTAAAAGTATCTTAC
TTACCCAGAAGGCCATGCAATTGAACAAACAAACTGAATATGATGGAAAG
GTTATGTATGTTGTTAGTGGTGTCGAATCTATGAGAGGTGAAACAAAGTA
CCTTCTATTCCATCGATTGAAGGTTGATCTCGAAGAAAATCTTGGAATAT
TTGTCGAAGATTATGATTTCCGGGTGAGTGATTTattaaatacaaaaata
atacacgtttttttaaataagaacaagcTANTCGGATGAGTGATTTATCA
AATACAAaattaatacacgtttttttaataagaacaaactatataagaac
ataaggcttcgacggttaaaatgttaagaacaagttaagaacattttaag
gctttatggactcaaaatcacccgatttcttaggaaaatgggtaaaaatg
gtgaaaaaatggtgaaaataagaacatgttaagaacatttttaggcttaa
aactgaaaaagttatttttggatgttctaaaaaaaaacgtgtagacctAA
GATCTTCTATAGCGGTCACAACGCCTTTCAGTATCTTAACAAGTGTAGTA
CCTATAGATTTATTCAACGACCACTTTTGTCTATTACTCCAACATAAAAT
AAACAAGGCCTTTCTTGCGTCGGTCCTTGTTGGCGTTATTCACGGCTATA
ATCGGCGTAAGCTTAACATTTGTCAGTGACGGATTACAAGAGACGGCGTA
AAAGGGTCTAGTCGGCGTTAATTAAGGGCCGATGAAGAGGTGATAAGGAA
GTAAAATTAATCAAAGGCTCTTTTAAAAATTGCCTTTTATTAATTGNTGG
AAGTCAAATtaattgccttttttaattaCCATTGACAGCAgcccattttt
tttattttatagggTTCTAAAGCGTTCACTCAGCTCATTGAAAAGATCAA
ATTACGTGATATCAAAGCAGTATTTGTTGATGAATGTGACGTCTGGTTAC
GAATTACCAAGAAACGCATAGAGCAGGTTATGCCACTCGTTGACTACTTA
TGGATCGTCCCATCAACTGAGTCTTTAAAGAAAGGAAATCACGAAAAATG
GTGGACAAAGTTTTCCGTAGTTAATCTCAAACAGAATTTCAGGAATTCTC
AACAAATTGCAAAAGCTACTAAATCAGTAGCGGAGAAGAACAATTATGCA
TACAAAGAAGGTATCGCAATTCCACTTGGTAATTTCCCAGCTGGTTGTGA
ACCTATTTTTGTGGATCTGTTTGAGGAAGCAGTGAAAGAAGCAAGGAAGC
GAACAAACGAAGGTATCCTTGTGATAATTCCAAATCATTATGACATTGTA
GAAGACTATTGTACGCTTTTGAATCAAGAGAACGAATACTGTAAAGCATA
CCATCTACATAAAAATGAATTTGGACCAGGAGAAAATCCATATGTGTTTC
TTCAGGAAGGCAACGTGTTACGGTGTACCACAAACCTTATCGTTGTAAGG
AAGAAATGAAGTATTTGTTGAAGGGGTGGAGAAACCACTAGCTAGAAGCT
ACTATATAAGaaatatgtttcttttctttaaatttgATGTATAATAATAg
tacaatgggcttttccagaaaaaaaccgtataccccctgttgaggaggtc
catcattttgtggcttgaaatgctgtaaccccctggaattccaggcaatt
tcaggtttaaacccctctggaattctgaatttagtaggatttaaaaggct
acccccatggaattccagttatttttgacagttttttgtacagggggtat
acggtttttttctggaaaagcccaatgtgtACTTAGCTCAAGGCTAATCA
ATATGAAATTGTATTTGTTAGAGGGTGGAGAAACCACTACTATACTATTA
AAACTGTCAcgcatgaaattttgaaatatttagatTATGATTATATTCTT
CCTAAGCTTGTAAAGCAGAGAAAAGAAATAAACCTTGAATACTTTTGGTC
TCGTGCCAATGGCCTCTTAGGATGTAAGACCGTTTTGTGAAATCAAATca
acccagccggcacacaacgtcgtttcaacgtttttccgatgttcacaatg
tccatataacgttagatgaacgttgaaacaacgttgtgtgccagctgggc
aaaGTAGATACTAGAGTCACTGTTCTTTATGCAGTTTGCCGATCATTTTT
ATATTAATTAGCGATCTTTGtaatattctttcttttttaattatgGAGGT
AGGAGATATTTAGCTACTATGAACCAAATCTCCTGGTGACAAAAGAGATT
TAATCCTCCAAACCCTAGTgaaaagtgaaaagtcaaaATTAACCCATGTA
CCGAGTCCCGTACTTAAAGCgctaactcctgaccacttgattttaAAGGG
TATAAACAGAATGCTTTTTAAATAGTTAATGAAATACCTTtctaatgggc
tcttccagaaaaaatccgttcatggggggtggaggatgaattgtccaggg
gtattgaaaaaataccaaaaaatcgcaatgtccagggggtaaattccaat
gtccagggataattttttgtgtccacggggttgatttgatgtttgtccag
gggtatagcCCGTGTCTAGGggattaaaaatcaaaatgtccaggggtaat
tcatgaaaaaaataatatatcctccaccccccatgaacggattttttctg
gaagagcccattcttgGAAAGCACTGTCGCTCGAATTTCGCGTTTTTATG
ACTCTTCGTTTCTTGAAATTCCTTGAAATATTTAAATTGCTTACTATACT
TTCTATCGCCATGTTGTAACTGGAAATATTTACGN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063349TCONS_00063349Clytia hemisphaericatranscript
TCONS_00063350TCONS_00063350Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063349-proteinTCONS_00063349-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_386supercontigscaffold_386:69891..74275 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.32	0.24	0.52	0.56	1.38	1.08	1.57	2.33	1.07	1.27	1.05	1.62	2.64	2.08	1.93	3.36	1.26	1.71	2.82	1.66	1.53	0.64	0.51	1.07	0.74	0.63	0.51	0.85	0.44	0.67