XLOC_039750 (gene) - C. hemisphaerica

Overview
NameXLOC_039750
Unique NameXLOC_039750
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_389:82182..85295+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039750 ID=XLOC_039750|Name=XLOC_039750|organism=Clytia hemisphaerica|type=gene|length=3114bp|location=Sequence derived from alignment at scaffold_389:82182..85295+ (Clytia hemisphaerica)
NNCAAACACGTGTTATCACACAGCAGTAGCCGCCTTACAATAACAAGGAA
TCAGCTAAAGATCTCTAATTTGTGTATTTACAGGACTAAGGGTAAGTATT
CTAATAGGTGAAGTTACATTCGAAAGTCTGAAGAGGGCATTTCctatttt
tgaagcatttttgtCATGTACTCAAAACATTTGATATTTTCCAAAAGATT
AAAATTTTATGGATGATTGAATGTTTAAAGGTTAGGTCATTAGACTCATT
TCCACTAATACCTGATAATACTTCTACTGTATGTGTAATTTCTCATTTTG
TCCTGTAAATACACAAATCTTCGACAGACAACGCCGACTAAAGAAAACAC
CAAGAAAGATCAACCAGTCGATCGAACAGCACCAACGACCATCATGATGG
ATTTCAGACTATACACTTATTTGACCCATCCATACATTTTTACTATCACA
GACTTTAATTTGTTGTATACTACCTACCATAATACCATTGCGTATGATAT
CGTCTGTNGAACCTAAGAGTACTCAAAACATTTGATATTTTCCAAAAGAT
TAAAATTTTATGGATGATTGAATGTTTAAAGGTTAGGTCATTGGACTCAT
TTCCACTAATACCTGATAATACTTCTACTGTATGTGTAATTTCTCATTTT
GTCCTGTAAATACACAAATCTTCGACAGACAACACCGACTAAAGAAAACA
CCAAGAAAGATCAACCAGTCGATCGAACAGCACCAACGACCATCATGATG
GATTTCAGACTATACCCTTATTTGACCCATCCATACATTTTTACTATCAC
AGACTTTAATTTGTTGTATACTACCTACCATAATACCATTGCGTATGATA
TCGTCTGTCAGTGTAATAAACATGGCACTATCTCAGACGAGCCACTGCTG
GAATAGGGATCCAATTCCTTTATCCAATGAAAACTCGACCCAATTACTTC
TTATCAAATCATCGAAATCAAAGAGTACCCtggtattttagcatttttct
cCGAATACCATTAACAGCACTCTTTCGGACGTTGCACAATAAGTTCCTAC
ACCCAATATCCTTAACCCTAAACTTCTCTCTTCTATCTAGTCCAAGAATG
AGTACGGAGTTGTTTATTGGNACTGGAATAGGAATCCAATTCCTTTATCC
AAAGAAAACTCGACCCAATTACTTCTTATCAAATCATCGAAATCAAAGAT
AACCCtggtattttagcatttttctcCGAATACCATTAACAGCACTCTTT
CGAACGTTGCACAATAAGTTCCTACACCCAATATCCTTAACCCTAAACTT
CTCTCTTCTATCTAGTCCAAGAATGAGTACGGAGTTGTTTATTGGAAATC
TCAACCCTAATACCCGCACTCGTGATTTGGAGAATGTCTTCGGAAGATAC
GGAAAAATTCTTCGATgtgatttaaagaaaaatttcggATTCATTCAATA
TGATGAACGACGTGATGCAGAAACAGCGATGATGAAAGAAAATGACCAAC
GCCTTATGGGATCTGTGATGACTGTTGAGTGGGCCAAAGGGTCTGGTCCT
CGCCAAGGAGGCGGTGGCGGTGGTGGCCGGCCTGGCGGAGGTAATCCAAG
GTATCGTTCGCCACCAAAAGGAGGAATGCGTGATCGATCGCCTTACGGTG
GCGGTAGAGCTCGTTCTCCACGTGGTGGCTTTGATAGAGGAGACAGAGAT
GATCGTTTAGGTGGTTATGGTGGTGGGCGTCGAGGTGGCGGNCGGCCGGC
CTGGCGGAGGTAATCCAAGGTATCGTTCGCCACCAAAAGGAGGAATGCGT
GATCGATCACCTTACGGCGGCGGTAGAGCTCGTTCTCCACGTGGTGGCTT
TGATAGAGGAGACAGAGATGATCGTTTAGGTGGTTATGGTGGTGGGCGTC
GAGGTGGCGGCGGGCGTGATTTTGATGACCGTGGTCCACCACGTGACCGA
CAGAGAGATCGTGGAGATCGATTCAGCGACGCACGAGGACCACCAGGAGG
AGATCGCCGAGGACCGCCTCGTGATCGACAACGTGGAGGAGGAGATCGAA
TGGGGCGTAGAGACAGTTTCGGTAGCGATCGCCGTAGTTTTGGCGGCGGA
CCAAGGCGCTTTTAAGTAAACAAAGTAGCTAGTGACAAATTTATTGGAGC
TTCACCGTTGAATTGAAGGGATCCTATATTTGCTTCATGACAAAACTCGT
AAAGCTGTGTTGCCGTGAAGAATTTTCGCACTTCATACCTTATGTGAATG
GGATAACTTAGATCTCTATAGCAATAGAACAATAGAGGGTTTGTATTTAT
TTGAAACAAACTTAACGAACTAAATTGATTGAAAGAGCTTAACAGAGACG
TCTAGATTTTTattgacatttttaattttgccaTTTTGGAAAATGTAAAT
AATATTGAGCGATCTTAACATAAATAACAAAAATCCTTTCTTGTTTTGTG
TTCTTCGCAAACTTCAGCTCGTTTGAAATGGAAAACATCAAATAAGGTCC
GCAACAGTCCGCAAtgtagtagagggcattttgtaaaatcgctcgactgt
tttgttagaagcacttgttatacatttttggaaagctaaggggtagggga
atcaaaattactatgtttccaattttttttcggacactttggtgtgattt
tcagacaaatatgacggtctcaggaaaaaatcatagggttaaaaattaat
gaaaattttagctcgagaaaacggagacctgttgtatatttttggaaagc
tcttataaaattaggattagagatatattgcaagtataggtgatttcaat
acctaactcgagatattgagcttcaaaaagcgcaaaaactggacaaaata
gctgtttctggctgaaaaacacggttttcaagagttaatatctcgagtta
tgtacagaaatcacctatacttgcaatatatctctaatcttaatttttta
cgagctttccaaaaatatacaacaggtctccgttttctcgagctaaaatt
ttcattaatttttaaccgtatgatttttgcctgagaccgtcatatttgtc
caaaaatcacaccaaagtgtccgaaaaaaaattggaaacatagtaatttc
gattcccctacccc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063422TCONS_00063422Clytia hemisphaericatranscript
TCONS_00063423TCONS_00063423Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063423-proteinTCONS_00063423-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_389supercontigscaffold_389:82182..85295 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
57.32	52.4	89.54	100.65	96.2	53.78	72.69	78.78	53.79	60.92	43.44	41.62	31.91	35.95	39.87	57.72	66.32	59.5	31.45	25.12	68.68	72.64	76.02	62.92	24.41	41.09	71.49	67.84	67.57	75.13