XLOC_039941 (gene) - C. hemisphaerica

Overview
NameXLOC_039941
Unique NameXLOC_039941
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_399:139257..146215-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039941 ID=XLOC_039941|Name=XLOC_039941|organism=Clytia hemisphaerica|type=gene|length=6959bp|location=Sequence derived from alignment at scaffold_399:139257..146215- (Clytia hemisphaerica)
TAGGTTTTAAGGGGTAAATAGCTAAAACTGCACTTTTTCACTTCCTCGTG AAAAACTGAAAACTGTTTTCTACAAAACATCACTGCTAGGGAAGACAATC ATAGACAACGTACTTTCAACACAAAATGTTTCAGCCTTACACTCCAACTA AACAATGAGATAGAGGGTACCACTTTTTATTGTGGGTTTTAAGGGGTATC CACTGGTACCTTACTTAACTTAATTTTCATAAGATTTCGTTTGGATTTTA CTGTTTCAAGTTTGGCCAGTCCCAAAATCTTTTTTTTTTCACAACTTTTT AAAAAGTTTATCTTACACCATCATAAAAGGAAAAAGCTGAGTAAGGAATC ATTTTACATAAAGAGCCTGGTAACTACCCATATATAAGACCTTACATTAA TCTTATTAAAACATTGCTAGCTCACTACAGAAGAGATAATTTATGAAATA AAGTTTCAAGTATGGAATGGTTTAGAATATACTTGGTCATTTTTGGTGTA CTTTGTGTTTGCAGTAACCGAGTTCGATCAGCTGAAGGTGAGATTTCTCT AGAACTTTGTCACTTTTCTATTTTATTTTATATTAATGCTGTCAATATGT TTCCGCAGCGCTCGTCATTCGGTTAAAATTCTTCTCCTTTTCGGAAGTTT TCGGACTCTAAATATGCTGAAAAACTGCGGACTCAGCAAACGGTTAACTA AAAATCGATTCACTCGAAAACTGCTGGAGTTTCGAAGGGCAATTTNCAGC AAACGGTTAACTAAAAATCGTTTCACTCGAAAACTGCTGGAGTTTCGAAG GGTAATTCTTTTTGTCAATTCTACACCCTATTAGGAGCATAATTTCAAAA AATTGCCCTGATATAAGGGGTGCCCTACGAAAACCTGTTTTAAGGCCTTT TCTGAATCTCGGACGCTGGTCTATGTCAAAAGAAAGTGTAATCTCTCTTT TTAATGGATCAGAAGCAACGCTCGCTTTCTTCATTTTTTGGACCTATAAA TTAACCTCTGTCCGTCCGTCCGTTCGTTACCGACTTTTCTCGAGATTGAA TCATAAGAATCTTTTGATTTTTGGTACAAAGGTGCAAAATGGTGGTGGCC AAAATGTGACGGAGCCCGATTTTCGAAAAAAATTTTGGGGGCAAATTTGG GCTTAAAACGGCTAAAAAACGGGTTTTTTGGATCATTAATTTTTTCTGAT TTATTACCATCATATGTAAAAGATGGCTTAAGCAGATTTTTGCAAAAAAA TATTTTGTTGGCTCAAAAAACACATCTTTATCTACAAGAATCACTATTTA ATAAGCATACACCTTTTTTTTTTTTAAGAAACTAGTTTTACCAAGTAGCC TCAATGTTTCTTAAGAAATCGGTCTTTTGAGCCTTAAATGTTTCTTACAT GTTTCTAAACTTTGTCAAGCTTAAAGGACGCATTTCGATAATACAATAGT CTAATTGACTAATCCACGGTACTTTCCTATCTTCTATATAGATTTTCTGA CTTTCTCAAGTGTTTCTAACTGTTATGTATGTATATTTCTGGAACCTTGA TTGGAAAGTTCTTAAAAAAAACAAATTAAAAAATGCTATTTTCTCATTCT CAGCCTCAGCATGTTTCTTAGATGTTTCTTAGTTTTTAGGCATTCTGAGC CTCATGTTTCTTAAAAGTGTGTTTCTTAAAAAAAAAAAAACGTGTACATC AATGTTCTTAGTCAAATTACTCAATTTCTTTTAGAATTTCAAATTATATT ATTATCATGTTATTTTTTCTAATCAGCCAAACCAGTGACAAAAGTCAAAG CATTCAGAATTGGTGTAAATCGATTCTGGCTGCACTGCTTTCCGAGGGGC AAACAAGCAATTAATGGCCGGAAATTCGAATGGTTTTACAACGGAACGGC CCTCAAACCCAATAAACGTATTAAGATCCGTGGATCGAACACTTGGGTAA GAATTCAAAAACCAACAGCACAAGATGTCGGAAAGTATTCGTGTAAAGAA ATTTTGGCTGGCAATGATAGAAAGACTCTTAGCATTTTCCATGTGAAAAT TGGTGAGATTATTATTCTAAACCATACTTGAGTCTTTAAAGCTCAAACCT CCATCTCATCTGTAACTCGAATGTCTCCTCAAACTTCTTAACATGTTTTC TAGTCCCTCCAGTTAACAATGCCTTATAAACCAATCTCCTTGACCCCATA TTTCCATAATTCGAACAATTTTGTGTTCCCCATGCGTGTTCGAGTTATAG AAATTCCACGGTATTACAAGCTGAATCTGATCAACTCGCGTTCGTTTAAG TTTTGCAAACTTTGATTTTTCTATGGAATATTCAAGCAAAATAATAAATC GAAAATTTTAGTCTATCAATCCCTCACTTTTCTCATGCTTCGGATGGAGC TAAATATGGCCATTATATCATTTAGTATACTTTTGGATTCGATTCGATCC GATTTGAATAATATAAAGTTACAGGCCTAACCAACGTGCATACAAGCCAG TTAACTTTAGAACACCATGATGTGATATAAAAGTGACATGGTTGGTTGAT TTGAATAATAACCCCGTCACCAACACTTTTTAAAGTTCATTTTCTATCGT AGACCAATCAACACTTGAATTCATTAACAAAAATCGTCCGAAGAACAAAA TTGTATTGAGCGGTGATACTACAACCCTATATTGTAACGCAACTGGTACT CAGCCAATCAAATATAAGTGGTACAAAAACAACAAGAAAATAAGGCGCAC AAGTCGTCCGTATTTAATCCTCAAGAATTTGAAAACAACAGATTCGGCAA AATACAGCTGTAAAGCAAAAAATAAAGTGTTGAATATACGATATGATGTC AACCTAGATGTAAAAGGTATGTCAATTTTTAACGTTTTTGTTCAATTACA CTGTTGTGCTTAATTGTAAGGGGGGGGGGTCACTTTCGGAAGAAAATATC CCAATATAATTTTATAATGACCCTCCCCCATTTTTGGAAATTTTCCTGAA AAAGTGCACAAAACCTTCATTTCCCTAGGGGTTTTGGGGAATTGCCCCAA AATCACTAATATCGATCCCCCAGAGTACCAACCTGCTTATTCCCCTACAA TTAAGCACAAAAGATTAGTGACCTATTATTGTGTTCCTTTTGATTTGGAA TATATTCGGCACTAACCTAGAATTAAACAATGGTACTTGATATCCTTTAA AAAGAGCAATAAAGTAGATAAGTTGAGATGGAACGACTTGCTTTGGCCGA AAGAAAGAGCTTTTGAAAGATAGTCAAGTTTTTGAGATCTGCTCTGACTA TAGACTTATTTACTATTTACAGTATTAGGTAGTTTTGCTTCCTAGACCTA CTTAGTACACTATGCATTATAAATTCATCTTTAATTTACAGCAAGGGCTA GGGTTAGTCCCTACATAGAAAAAGATGGAGATGATGATGACGGAAAAGCT ATCGTTGGTTCAACTGCCTCTCTTTCATGTTACGAACTTCAGAGCCCTAC TTTACCCAAGTTCGTCTGGCTTAAATGGAAAGGAGCGGCCAATTTAACCG TATTAAACAGAATCGCTGAATCGTCAAATAATTTAGTCGATTATGCATCA ATGGTTGAGATTTTACCAGCAGATAGGTATAAACAGGTGTCCAAGAAAGC TTTCCGATTGAGAGATCCAGAACATAGGATCCATGGCGTGGACCTGATAT TTCCTGATGTGACGCTATTCGATCGTGGATTTTATACGTGTTTAGTTTCA AACCAAGCTGGATACGATTACAAAATCACTTATTTTAACATAGAACGATC ACGTAAGTTTTTTACTTTTTCATATTACAGTTGACTCTCTCCTATTCGAT CTTCAACGGACCAAAAAAATAATTCGAATTAAAGAAATATTCAAATTATA GAGAGTAATTTAAACAAACTTCCACACGAGGGGACCAATATTTTAGTGCG AATCACGGAAAGATTCAAATTTAGAGAGAGTTAGAGAGATTTCTATTGTA ATACCCCCGAAACAATCCCACAATGCATCGCTTTTTTAGAAAAATCAAAA ACTCCGATAAGATCTATATGATAATCACATACCATGTAGATTTCAAGTTT TAAGCATTGTTTCTCTTCTTTCATTCCAGGAAAACCACGGATCCCAAATA ATATCACTGACCTCGCAGAAAAAATTGGAGATGATGTAGAAATTAAATGC TTTATTCTAGGAGAAGGACCTCTCAATGTTACATGGTGTGTTTTATCATT TTATTTACTCTCATGACTCAAGATATTTTCTTCAGTGTAAAAAAAACCTT AAAACTAGGAATTCCAAACTACTACTGTACATACACTGAACTCACTCTAA TTCAAATTATCATTATTTTTTTCTGTAGTTGGTACTAAATCATTGGTTGC CTCAGTTTAAAAATGGTATAAATTGCTCTCTGTAATTCGAATCTTTCTCT AATTCGAAGAAAGTTTCAGGTCTTTTGAAGATCGAATTAAGGAGAGTCAT AACTGTAAATTAGTTTAAGCTAGTGTTTTTGTATTCCTAAACTGTAACAC GTAGGGGCCCCCACGTACTGTAAAGAAGATTCGGATTCGCAGTTGATATG ATCTTCCATTCTTTTTGACAGGTATAAAGATGACGTACCAATCGGTGAAC TTCAACATATTAGTAAATTCCAACAGCGAAACCATCGCTCAATATTCAAA GTTTCCAATTTCAAATCCGCTGATGCAGGCTATTATAAATGCAGAGCCAA AAACGCTTTTGGAGAAGCTAGCTATACTTTTAAATTAGTACCCATGGTTA CTAATAATAATGCGGTACCGAAAATAATAAAGGATTCAAAAACGACTTAT CAAGTTGGTATCGGGGAAGATCTGGAGATTAAAATACAATACGTCGTTAA AGGAATCGCCCATACGCAATTACTGTTATATTGCGGTGGTCAAACTGATA ACCCGTTATGCGCTGGAGGACGGAAGACTTTATCGGGGACATTTCGGGTG TTAGATGTTCCCAGAACAATGGTTTCTGAAGGAGATAACCACACCGTAAT GTTGTCTTTCAAGAAGATCAACGAATCGTTGTATGGCAACTATAGTGTAT TTGTTGGAAACGCTCTTGGTTACGATTTCATTAATGTAACGATTAAACCC GCAGCAGGTAAGTACTCATGTAACAGAGATTCTCTATAAATTTAAGGTCA ATGTTTATTGCGCTTTCTTGGGGAAATCATGGGGAAACAAAAAGATTACT AAAGAGATGCATCTTCATTATTGACTAAATTCAACTCAAATTTAGAACAT TTTTACGATTTGCTTTGATTAATTTGGCTCAAAATGTTTGAGAGAGTTTC TTCCTGAGTCTTGAGCTTGTGCAGTTATTATGTATATAGCTTAGAGCACT AATTTCATCCGCATTTTCTCTCTTAGTCAAACCTGTAATCCTGCACATGC GCACTACAACTTTCATCACACAACTTGGCGTGGATTTCATGTTCCCAGAA TGCAAAGTAGTCATCCAATCAAAATCGCTAGCTAAAATCACATGGAAAAA ATCATTTAGTGATATTGCGTCAAGTGAACGTCATATTGTCCGACAAAACA AACTCATGATTAAAGATGTTCGGAATTCAGATGCTGGTTATTATACATGT AATGCTCGAAACTCCGCTGGTAAGTCTTTCGCTGGTTTAATTAATTCACA GGAGTGATTCTTCAAGCTTAGATCATCATCACTGTGAAAAAATCTTTCAA AAATATTCATTCAATCAAAAGATATCAAACTAAAATTATTGCTGGTTAAC TCTATAAAGTAATAAAAAAACGACAAATAATTTGATTGAATGAATATTTT TGAGAATTTTTTTCACAGTTATGATGGTCAAAGATTGAAGAATCACTCCT GTGAAAATGGTAATTATACCACATTTCTACAAGAAGTTGATTTTTTTCTT CTTCATTTTTCATTTTCAATTTCCTTTATTTTTCAATTTGTTTTGTTTGA TAATATTCACAACTATCTTTTCAACGACCACAAAATCGCAACTTCATTCA AATTCTATCAAAAGTTACAGCCATTTTTTGTCTCAACTGCAAATTATTTT GAGACAGACTTTATGCACCAATCTCACTTTTCTTATCATAAGCATCTCAG CATTTTAATTCAAACCACTTTGAAAGGAATTCTTATTTTAACTTTTTCAA CTTTTCATACTAGGTGAAGACCAAGTCCGTCTGATATTGAAGGTATGGCC TTTAGTAATCAACAAGACATCACCGGCTCTTATAACACGCCTTGGTAGGG GAACCGTAGAAATCTTTTGCTCTGCATACGGAAACACCCGAAATATGACC GGAACAATCGAAAATGCGGGTTACCCAGTACCTAACGTTGTCAAAACAAC CAAAGACAATTTATTTATGGTGAAGGTGAATGTAACTGACGATGGAACTT TTGTTTGTACCATTCAAAGTGGAAAGGAGAAAGCTCAAAGCGCAACCGTT GTTGAACAATTTCATTGAAAGTGATCAGATAGTGATACAAACAATTTTTG GACCTACCCCGGTGGGGTGGAGGTCCTATAAATTCATCTCTGTCCGTTCG TCCGTTCGTCCGTTCGTTACCAGCTTTTCTCGAGATTGAATCATAGGAAT CATTTGATTTTTGGTACAAAGTGGTACACACGGTGGTGGCCAAAATTTAT AGAAAAACTGGCCAAGTTCAATATTTTTTTATAATCCCATTATCAATTAC TTAGGTATTAGCTTTTCTCGAGATTGGCTCTTTCATTCTTTAAGACTTTT TGCACAAAGATGCATAACTATAAACCCTCGGAGCCCAATTTTCGAAAAAA AAAATGTTTCTGGGCAAATTTGGGCCAAAAAACGGCTAAAAAGCGGGTTT TTTTGACTTTGTGAAAAATTGGATCATTGATTTTTTCTGATTATTTGCAT GGAAGTAGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063718TCONS_00063718Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063718-proteinTCONS_00063718-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_399supercontigscaffold_399:139257..146215 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.77 0.72 1.71 1.92 10.63 7.84 36.35 40.68 44.85 28.1 23.04 68.97 6.83 8.81 2 2.58 71.04 43.22 18.81 39.11 15.51 16.92 6.13 6.58 6.76 5.94 2.26 1.65 18.59 12.15