XLOC_040041 (gene) - C. hemisphaerica

Overview
NameXLOC_040041
Unique NameXLOC_040041
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_404:118650..125441+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040041 ID=XLOC_040041|Name=XLOC_040041|organism=Clytia hemisphaerica|type=gene|length=6792bp|location=Sequence derived from alignment at scaffold_404:118650..125441+ (Clytia hemisphaerica)
TTTTAAGCATGTTTTTTTGCCAACGACTGAGTTAAAAGCCGCAAAGTTTG GTTCTGTTTTTACTAGAATCGGTTCTCTAGtgaataaatttgaaatttac caCCGAGACCTATAATCCATTAATCCCGCAATCAGGTTAATGCAGCTATG AACAAGTAACTGATTCCTTTAACGTTTAAATTTGGACCTTTccagttttt gagaaatcttAGGGAAAAAACGGTCCGATTACTAAATTGTTGATAAACAT GAAAAGGATATTTTGTTTATCTTCCCCAGGTCTTTCCAAACGATCGTAAT CATCATCATTGCTATCGACATTATGATCATTCGTTTCATGAGATGTTTTA CATGCTCCACATTTACTTGGATCAACTACCAGCAAATACAGGTTGGTATG TACCACACTCGAAATCGTAAAATTCCTATGGTACAGTTGAGATTAACTTT AACACCGATTGTTAACCTTACtgtcttaaccctttaagtgccaatgtcga gtGTAAACGATATGGGCTGTATGCCCAGTTTCTCTTTCAGTCAGAttcgc gcagcgggcctgatgCTTTAAACCCCCTAACCTACCCCCTCCTAGCCGCC GCCAACCCCGCACTTCCTAAATCGGGCTATCCAATGAGCTatgaacgagc ttctaactccttctagatccggagatgtaagcctttaaagtttgacctag cgatttaaaaaaaggaCCGTGGCACTTAGAAGGGTTAAATTGTTAATCGC CTTCTTCCAAATCGATGCTTGATGTTTACAACCCTTTCTTACAGCCTCCG TGGAACTTTTATCCTCAGTGAGTATGAAAATTCCAattaaaatcccaatg gggatagaaattctattattccaaggtgaaaaatccagtgggtttttagt gcaatttttaaacattgaattttgagtgtggatgaaatcaaagtcaatat cccagtggggctgaatttcaagggtattttcctaccgggacgaatttttt ttgcgaaatttttcaGTGGTGCTGTGATCCCAGcgggtttgtgacacagg ggtgtatgttTGTTCGTATGTTTCAGATCATTCAATCTCTAGAGATGAAT TTTGTCTTTTGATAGCCTTATTTAATTTGatctgaaaatctgaaaatctg aaaatctaggTCAATAAGACTCTACACAGTTATCATATGGAGGAggatat ttttaaaataatactACCTCAAGCATTTGTCTTTTGAATCACACGTGGCC ATTCCTAAGATATGAAAAGAAGtataaaattatgattttttttagtaaAT CAAAAACCTGAACCAGCATCAACCGTAGAGAacattgtaaaaaatgaaac taTCTATAAACCAATCTATTTTGTTTGACACTATCCAAAAGATACAAGTT TTAAGGACAATGGGCTATTCTTTTTCATAacccatacaggggggtgggcG AATTGCCAGTGGGTAAtctgagaagaatttccagggggtgttttttcatt tttccaaggcgTTAAAAAGTTAAAGTTTCCAGGGGTTAAAAGACTGATTT CAGTTCGTATgaaaaggtatgaaaagaattttccaggGGTTATCCACGCA TATAGTTTTTTATGGAACATCCCAATAtaccaaaatttctttacaacaTT TTCGACTTTTGGTCAGAGTGTGGACTGCGTGGTACTGTGACAACTCTTCT GTAGTGAACCGTCGCTTGCAAGTGTCATTTTAAATATGTTATCTAGGGCT TAAACATTACCTTGGGCTATAATTGGTTGCTCTTGATCACGTGATAAATA CATTGTTGTGTTCTTGACGCAActaacataaataaaatcttcattttcga tCATAGTTCGAGCTGAAAAGTAGAGCAACAAAATTAAGATTAAGTGATTA GATGAAAGCTCATTGTGTAGAAAAATTCAGTTTATTTACCAGTTTTTGTA CTGGACAAATGGTGTCAAATAGGAGACTTACTCCCAGAGATCtttataac acccccttctcacagacccggtaggattttttcagccagtgaggATAAAA ATAACTCGATActcgatattcccatatttttttggccggggatttcaatt attttgttccTCAGAAAATACAGTTGGGATTGGGAAAAGAGCATTatgtt ttgcagtgaggattggttcctttgattattttcagtggggacaaaatttg gatgataattttccaccggggacgttattttggccgatttttccagtggg aaggggccCCAGtcggtctatgagaagggggtgctATATAACACATCGTT AGTATTAGGCTATAGATTTCACAGATACGGCGTATGCAAGACAAATAGAC CAACCAAAACACGACCACGTCAGGGAAGTGGTAGGATCTCCTACCCAGtg caaaattttgccaaaacaTCGTCCACTGGGATAAATGTAAATAATAAAGA TTAACTCTCATATTTGAAATATTGCCCTTTCTAAAAGCATCCAATCATTC ATTGGAATTTTGATTAAAGTGTTCATCAGGGCACTGGGACAGAAAGAGTA CAATGCCTTTACCTGAAGAACCAATTGAAGTCCACATCGATGTCCAAATA CtgcaaataaaaagataataaaaTGGATTCTTTGGTAATTGGGTTGAAGC ATTGGTTGAAATATGGCAAGCAAGACAGATTATAGTGTACACTTAAAGTG AAAAGAATAAATTGTCAAATAGTTAAATAGTTAAATCTCGAGAGTCATAT CATTCTCCTTGGGTTGtcatatataattttcaaatttgaatatTTGGTTA AAGAATGGCGACCAGAATACTATAATTAGTTAATTAAGTTACTTACAGTG GCCAGACATCTTTGTCTCACTGGTCTatcattatttcattatttcatttc attcattATGTTCATTTCAAAATGACGATATTATTAAAAAATCTCCTTTT ATtggaagaaatttgaaaatattgaaggaACTTACGAAAATAAACTGGTT tgaagtaatgaaactaacaaAGAAATAATCCaagtgaaaatctgaaaaaa aatccattgtTTATGGTTGTTAttgattataatatttcaacCTTGGTAAT GCTGTTATCAATAAATATCACTATGCCAATTTTAACAGATTACAGTTTGC ATCGCTTGTAATCAGTTTCAAAGTTAAAACAACAGCCTGGTTAGTTGAAA TAACCAGAGAAATATGAGAAGGGATTTTTGAGTTGAATGCTCTTCTAGCT ATGTTATTTTCAAGCTTGGAGTAGATTAGATGTTGTATCTTTGTAGATTT AACGAGAAGAAACTTACATTTTTCAGTTCAGCTGCGCTACTGTCATTATT TGTCGGTAATTTACACGAAGCTTGATAGTCTGGTAGCGTAACCCTGAAAT GATATTGTAAAGCATACTCCAAAGTAAAAATGCAtccaaaacaaatattt ttttcaggcaTAAGtaagatttttaagaaatatgTAGCTCTTGGGTAAAA ATTGTTCTCATTATAAATTGAAGCAAGCAGACTTACAAAGTAAAGAAGGG AGCTTCTGAGGGTAGAAATACCAAAATTCTGgtaataaatttctaaaata ccGGTACAGGAAAAACCTCTGTTGAAATCGCCAAATAGCGACGTACCGGA TTACCGGTGGAATAATTCAGCGGTACTgacagtttttttttgaaatccaa attcaaaatttcttcgTGACTTCTTTGGAATGCTGATGCCGAAATACAAG TACTGGTAGGTAATTTAAATCCTGGTAAATCTTTATGTAAACAGCGATAC AATAAGTAGACATCTCAAATAACGGAGTACTGGTAATTTCActttcaaat accggcataccggtagaaaaaaagattaaatgaCTCCGTAAAAGAGTCTC CCGAAAATTTAGACCAGTTCTTACACTTGATAGAGGGAGTGTGACTTATC TTCCTCGATCAATTTTCGCATCACATTTTGATCAACTTCTCCGAAAAATA ACCCAATCTGTTAAAGAAAGTCAGGAGATCAATTGTTGTTACAAAAAAGA TTTGTGGTTCTCCCTTTCAACCTATTCTTGCTACTTATAGCTGGTCACTG TAAAGAAATTAGCAATCTTACGTCTGCTTCTTCGTTTGAGGCGACAACGA AACCATTTTCATCCAACAGATAACAATATAAACCCTCCACCTGTCAAAAA ATATCGATCAAAAAAAACATACGGTCTGATCCTTTAGTAAAGGTTTTCTT gtcattttgtgatttttgaaactACAAATAAGCAAACTTTGGCAAAATCT AAAAGCTCTGACCCCTATTTACTCTGATTTACTATGATTTGTGTTTGGAT TCCTGAGATATTTTATAAACTTTGTCCTTTCACGCATACTGTCAAAATTT TGATCACACCATCGCACACCAAAAAATCGAGACCACTTCAACACGCCAGC AAAAAATCACGCAAACCACTAGGggtttctttaaagaaagaaagaagaag tgACAATACCTGATTCTTCAAATGACGATCACAAGTCAATCTGCCATCAT AAAGATGTTCATCAGGGAactcttttgttttttcaatgaaattagTCGTC ATAAATTTTTCGTAAGACATTTCTACACCAGTGACTGgaaagaatgaaaa tttaaaaaagatttcaaatctTCAACCTAACCATCAATCGAGCAACGACG GTGTAtaggattttctttttttttNGAATCTCTAACCTAACCATCAATCG AACAACGACAATGTTtaggattttcttttttttgtcatcAAAAGATACGT ATTTATTTTCGCTGGGATATGATTGAATGTCTGTCAATGTCTACAAAAAC ACAGTAACGGGCGTAGTTTGTTGATAAAACGCAGTGATCGAAAGGCAGTG CTTAGAATAGAGCTTTGGGAAAGACTCCTTTCGGATGAATTACCTGCTAA AGTGATACCTGCTTTCTTTTGAAGAATCGGATTATGAATTGATATCACGT GATCATCTTCTCCTCTTCCTATTGGTTGTTGAAAAACAACGTGAACTTCT ATGCGATGTGTTTTTTCAGTTGATCCTGCTACTAGGGGTTTTCTATAAGG TTTTGTGAGGTTAATCCGAAAGAAGACCTAGATATACTTTTGTCTATCTC TATACTCTACATGCAATATTTATCATAAGTTATAATAACTGGGAGGATGG AAAACTTTTATAGGGTGATTTAGGACGTTGTTGGACTTTCAAAAACTGGC TTTGAACTATCATATCCTACCTTTTATCAAAGAGATGGTTAGCCGATTTG GAATGTGATTGGCTCGTTTGTAAAAATCAAAAGGATCGTAACTTTCGCGT GAAATGCTCTCAAAGCCACCGTCAATAAGTTCgctattaaaaaaattgaa agtatcACACCTGACTTTAACCCTTTAAAGTCTCCACGgtcctttttttc taagtttttaaataaaatcgctaatttaaactttaaaggctttttattat actcgacattggcacttaaagggttaacgcCAAACAGCAATGTTCTTTAT TGTTCTTCATTGATAATTTGCTTTGAGTTTTGCTTGTAAAGAATCACACT GAGGCACGGGGGTCTCGTTTGCATCAAACTTTCttaccttcaaaatttat tccTTAATAAAGTTCTCTCAAAAATCATTCAATCTCAAAGGATTTTTTGT TTGAGACAAAAAGCACATCTGGAAACCTTGATAATAATCTAATTCTTAAA GAATAACAAAAATGTGTACTCATTACCTATTATTTTTCCTCTTGATACTT TGTATAACTCCCCAATGCGTTCGAATGAAAATATGATTGATCCCATTCCT AGAATATTAAAGAACTAtcgtacacccctgtgtcacagacccgccgAACC CCAccctcactggaaaatttgaccaaaatttcgtccccggtggaagaATA CCGTACAATTTCAATCTCACTGCGAATtggctttgatttcatcccaatcc aaaattcaatgcaaaaaattgcactccagaACTATCCCAAGAAGATTTTT CCActtaggaacaatagaatttttctccAAATTGGGTTTTCGATAGAAAA TTTTACCCTCGCTataggaaaaagtttcaccggggctgtgagacaggcgT GTTACCGTAAGTATCACAATGTATGGACAAAACACTGGTAGGGAAGATAG CGATTCTAATTCAGCGTGCGTTCAGTGAGAACAAAAGAAGCCATAGCAAT CATCCAGGATATTGGATGAAGACTGAACCAATCAAATTTATAAATAACAA ACATAGAATGATGAGATGAATATAAATATATGTAATCTTTTCAAGTTTAA CGTAAAGATAAGTGCTCTCCCCTTTAAAAAATAACGTGAATGAGACATAC GCGATAAGATTCTGTCCGTCCGTCCTCATAGGTTAAATTTCTAAAGCTAA ACTATGATTCTCACAGCTCCTCCAAACTAGAGTAAATTTATTTGCactta tttatttttacatctATCTCAATTTTTGTATTCTAGAACTGGCTCTTACG TGGTCAGATTTTAGTTTTGTGCTATCCATGATCTTCAACAGGACGCAGAA GAATCCCCCTTAAAAAGTAGATCCCAGTTCTACCATTTTACCTAAAAAAC CTCCTTTGCTAGTAGATAACCTGGGAAAAGCTACAATGTGGAATCTTACT CTTCAATTTTCTCCCTTTTagatttccattgttttggtaATTGACTTGTG GCTTTTGCATCCAACAATAAACCGTGTACCATTCGATGGTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063859TCONS_00063859Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_404supercontigscaffold_404:118650..125441 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0.16 0 0 0 0.17 0 0.09 0 0.09 0.19 1.16 0 0 0.42 0.34 0.6 0.47 0.32 0.21 0.16 0.16 0.45 0.4 0.19 0.24 0.16 0