XLOC_040358 (gene) - C. hemisphaerica

Overview
NameXLOC_040358
Unique NameXLOC_040358
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_412:60430..71509+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040358 ID=XLOC_040358|Name=XLOC_040358|organism=Clytia hemisphaerica|type=gene|length=11080bp|location=Sequence derived from alignment at scaffold_412:60430..71509+ (Clytia hemisphaerica)
gacaaagacaaaattgaaGACAGACAAAAAAATGGCAGCAATGActaatt tttaataatttttctcaaGGTGAACCCTCGGAACTTGAAACctgtttaat ttcttttttcaagaaaatctacAAGATTGGGGAACAATCCCTTTGCTTAC TTACAGCTATTCTCATCGATCTTTTATTGTTTGTATTGTTATCAAAGCTT TTAGAGCAATTATAAGAACTGACTATACAATCAAGGTTATTACGTTTGCT GGAAATGTCTGGAATTTAGCATAAGCCTGCAAACCAAAATGTCTGGAAAG TCTTATAATAAACATAAAGATATGTTAACAACACCCTCATTCCAACTTTG GGTTAGCATCCAGGGGATGTATCCCCTCTTGAAATCTATGATTGTTGACT TTGCACACTTTTCATAAACTTGTTTAAATAGCATTTTTCACTGACTCATT ATCTATAACTTTGCCTAATCTTTACAGTCATAAtatcaacaaaagaaatg tcATCTTCAAGATCAAAAGGATCATCGCATCAAGAGGATTCAGAAATGAC TTCTATGGAACTAAGATCTAAGCTCTTTCATTCATTTCGAAATAAAGGAA TGCTACAGTCTGTCAAGGTACAGTttatttaaagaactttcaaagtTAGA TTCATGCTTCTGGgctcaacttttttttactttttttaactaatctattt tttttctcctagAGTCAACTGCGAAATCGTCTGGCTTTAGAACTTCAAGC CAAACTTCATTCTGATGGACAACCCAAAGAAACTAACCAATCCAACCATA CTCTTGTTCAACAGATTTCAAATCACCTGGTCTTGAATCATCTTCATTAT TCTAAATACGATTATTCCCTTTCTGTTTTTCTATCAGAAAGCTCTACAAA TTCAGAGAAGGTATGATTGAATCAGTTCCATTCATTGTAATTATCTTAAT TTTATTCACActaaatgggccattccattttatatccatacaggggcgTG AGCgaatatttccagggggtaattgaagcagaatttccagggggtctaaa agagtgtttttcatttttctaggaggtaatagaaatattttaaaatttcc aggggttaaAGACTGATTTCAGTTGGTCCACCATCACTTTAaggtataaa aataaattttccaagggtctttttgcaaattttgccattttccagggggt atccacacattttcaaaaattattttttgactcgaaaaggttcgtccacc cccccccccctgtatggaaatttaattttattcaccCTAAATGAAAGTCT TGATGCTAACAACATAAACTTggtttaactttttaagttttgctttcctT TTTTTAGAAATGGAGTGTATATGATTTATTACAAATGTTGAATGTTCATC CAGAATCACTTTTATATCAAAGACTAGTACGTACTGGTGTTATgtttttt taaaatgattttagtGTAACCTCTTATAAATTCTGCTACAACAACAGAAG AACATTTTTGTGATATTGTAagaataatttcaaacttttccatATTAGAT ACAAAGTTGTGATGATCAAATAAGTCAGGAAAGTAAGTCGATTCAAATGT GAAAATAATTTGagcaatatttcaatatttgagGTAAAAGGTTAATGTCT AAAGGTTACCTTGAATAGAAATTTTGTGAGAATGTGTCAACTCGTGAAca taatattttttgaagaacTCTTGATATGTtctatttttctattatttcag gTTTTTTGTATTCCTTCTTGAGACAACTGTCCACCGGACTTTCACATTCC AACACTGATTGCTCCACACAAACAGAAGAAGTTGTCTCAACCCTCGGTAA GAGTTATCGTTTAGCCGTTATTCATTAGATCCATTAAACTATGCCCGATA ATCTGTCACACTTTCTACAACAAGTCACCATTTCTACCAATAGAGTACAA ATTGAGAGAAGTTGAAATGGCATTGCAAAAGAAATCACATTTGAGAGAAA GCGGATCTCTGGAAGCAAAGCTTTTAGAACATCAAAAGAGATATgaatta caaaagaaaaaagaattcaaaatagAGGTTTGCGTagatatttaaatttt cagaaattacCTCTTcgacatttttaaaataaaatatacagTATTTTGTT CATCATCTGGTCGTCAAACGTTCTACTTAATTAATATTTGTCTCTTAGAT GGACCGGTTTAAATCGACACAACTTTCAATGATGCGATtggaagaaagag aaaaacatgACAAACAACTCAACAAAATGAAAGAACATGTGAGAAAAAGA TTATTACGCAAAGAAGGGAACTTTCTATATTCAATAATTCCGTTGTATTT ATTAGTTACTTTAGATTTCGATAATTCCCTTGATTCATTTTTGGATGATT ATTTTAGTACGAGGCAACTTATAAAAAGCAACTTGTCAACTTGGAAAACA AAGAGAAAGATTGGGAAAGGAGTCGTCACGAACAGCGACAGGTGAGTTCT TACATATTTTGTTGTAAAGTTTgtaagcaaccaggttgctaaggctcgAA ACCAGCCAAAGTTTTTACTATTTCTTAAGGAAAAGCTTCTTTATAATCTA ACTCTAGAAAATGATAAGCCTTGATCGGATAAGAATAAATATGTTATANG AACAACAGTCTCTATGTAGGGGACTACTGGCATTTAGTCAAAAATGAGAT TGACGTTACGTATCCTTTCTCTGGAATGGCCCTTTTGATTATTATTGCTG TTCCCCTTGCATCCATTGAAACATGGAGTTATCAAGATATTTACTGCAGT TTTGATTACACAACGTGACATCGCACCTACatttaaagaagaaattttgg caggaatttaatNATTAAATGTTCGGTGAATCGGGAAATTATTTCCCGCG taaattcttgcataagccGTTTTATCTCTGTTATATTACGCCACGCAAAC TTATCGGACAGTATTTGCGGTGTATAGATTCTAATTAGCTCCGTAGTAGT TAGCGCACTTGTTTTATGAAATCTAAATAACGGAGATAATTATGNCAGAA ACGTCCGGAGCAAAAAGTGTCGTTTTTCTCGTATTTCGGCAATTGATCTA CACTGGAACTCTGGAGCTGTGTTAAGAGTAACTTTCCAGAGATGATAATA GTGTTTTTTTTAGCTGCTCTGGAAAACTCCAGAAGTTTCCGGAGCACCGG GAGGGTCCTTTTAATTTGGTGGTtaacttgaaaattaaatttagtgggaa tttaatttggtggattggGCCAAAATCATCCACATGTAATTTGGATCAAA TGTTATCTATTTAAAGGCAAATAACttcccgtcaaatttaatttttcaaa gctCGCAGCCATATTAAATTCCCTCCAAAATCTTTACTTTTGTTAAGAAT ACTTTTAACTGTATCATTAGATTTACTATAataatttattgaaactttCT AGCAACAATTTTTTATTGTACAAACAAGAAACATTCATTAATATAAGTTA AACATGATATGATTAAGTGACCTTCTTCAAACTCAAACCCTATAACTTGA ATGTGTCCTTAACTGAAACGGTTTTTTTATCCCTTCAGAAgaaatttagg ctattttcatCTATATccctacaatcatggacaaaaggttgtagacaaat gatgacaaatagagcaaaatgactcttcaatgtgtctgaaaagggaggga agttaagaaaaacacttttgaagtcgttgcattgcttttgaattgctttt gagggaaccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNACACTGTTAAGCTTTTcgtcttttacttttttcaaactttt aagctCTTTAAAAAGCTATTCCATTTAggcgaccttccagcgcagctggt ttattttatgGATTGTTTTTGCTGCTAGAATACTAAGCAGTTCCTGTCCT CCCGAAATCGCGGTTgcttttatgaaaatatatattttttgatttgtctt tttttatcacCCATATTGCTGGAATTGAAGGCAAACTAATGGTCGAGCTT ATTATTACCATGGCTCTATGACCTCAAATTCTTTTTAGCTTATGCGTTGA TGTTATTTTACTGCGTtaaatcatatttcaatttatgtcttttttttaga ATGCTGAAAAAGAGGCGTACGACAAGCGACAGAAAGTACTCTCTGATTTA CAAAGGTTGAAAGATCGTGAAAATCAACTGGAAAAGAACAATGAACTCGC cttaaagtaaatattttttgctaAGTACTTTCCCCAAATGTACCTAACtc tcaatttgaaaaaatcagaaTCGACCCATAATAACAAAAAAGGTTGACTG AGtagcaaaactttttttaggaGTTTGAATATGGAGGAGGAGAATTTGCG ATCACGAAGAGAACAATTGAAGTATAAAGAAGAAAGTATGAAAGATCTTG AGCGAAGATACGAAGAACGACTGCAAAATGAAATCATcaagtttgttttt cttttatcataCTTTTACGGTACTCAGGTAAACATAGGCATTTGGCTAGA GTCGGGTCTTTCAACTTTTGGGATGTCGCATCTCTTTAAGAGATGGCTTG TTAGGCATCTGAAATTCTTAAACCATATTCTAACACCACCGTTTGAAGTC TTTTCAAAATCTCCAAAATCTTATCGGTCGATACTTTATCTTTTCAGAAT GAAGTATGACCTTCAAATGGTAGAGaggaatcagcatgaaaaactgcAAA AACAAGAATTGAAATTTAAAGGTACAAATTACTCTCGTGTTCGTGTTCAC ATGGAACAGTCCATTCCTTTGTGTGTGGGGTACCTTGGCATTTCCCAGGC CTTTCTCTTTTGTTTAAACCttgaaaacgttttttttttttaccctgGAA AAATATTTGGTCCTGTGGTGGCATTttctttttcctatttttaaTAGCCA CTTCATACAATTTCATTGAAACCATTTCATATTATCTAGAGGACAAAGTG AACTTTGAAGCACAAAAAGATCTCCATTTGGGATGGAAAAAGGAAGCTGA AAAATTCAGAAGCTTGGTCGAGGAAAAACAGGTACcagagatttttgaaa ataatataattgtgcaatgaaaataaaactgCTTTAAAAAGGTTAACAAG TAActcttgattgttttttttctgtcaGTATGAACTTTTGGCATCAAAAG AGACCATTGGTAGCATGAGCAACAAAATCGCAATTTTAACTGAACGATGT CAAAAGgtacatttttcaatttatttgttTTCTCCCTTCTATTGTTTAGC TAATTTAACCCAAGACCCTACTGAAACCCTATGATTGAAGAATGGATATC TCGCACGGCTTACCCAAAGTGACTTGTTCTTCGAAATATCTAATGGAAGT AGAAAGTTACGAATAAGGGAAATGATCACTAACCCTGTTACAGTATCTaa tctcaaatttttttatgattcttaGTTGACGAATTATGAAGAAGTTTGTA ATTTGAATAAACTTCTGGAACGAGATATGGCTTTGTTACAAAGGTTAGTA GGTACATGCACAGgaagaaaaaaagtatcgagttcgaacatggTTCTGAG TAGAAAGTTGTTGCGTGTGCTAAAGAAAATGTAAGGaaatatataccaac acaataattgtttttacaacagtcattatgattaaaaagaattaactttc tttacaattttcatgacgttaaagttattgagaattgttttttttgtaaa agttattcataaaagatgtctcatgacaattaatatgagagaaactttga taaacattgcaaatttagtgaaacacacaccaGAACTtttttctatagaa gtggtacgactcgatactttttttccggacaccctatAGTGCCTTCAGCC CTTTTTGTCGATATGCGATAGAGATTTTAACTTCTCTAAAAaagaatttg gcaaaaatctgATTTTAGGGAGCCCGGGAGAAAAAGTTATCTACTGTATT CCTTCTGAGAGGACTGAGTATTTTTGGGATGGTAGGCTTCAGACTATTTA ATTCAAAATGCTCTTGGTAGAGAAAATAAACTCTTTTCACACAAAAAATC TACTCTAAATTCCCAAAACGGGACTCTCTTGATTTTTTCTCGCTTTTCTT ATAATCAGGGGCCTTATGTGTTAAGTTTTACTTGTTTTTTTCTGGAGAAA AAACGGTATACGTATGCTTTCATTGTCTTGTATTTATCAGAGGGTGACTG TTCTCTTTGAGTGGACAAAGTCTTCaatgtctttcttttttcagaaattt tgacaaTGTAAACATGGAGAAGgcacaaaaagaaaaaggtaaaGCAAATT GATATGCATTATTTGAAATCCGACTCTGAAATCATCCCTTGGAAAAGAAA GCTACTCGAGTGGGAGGAAGTATGTAATATAATAGGAGCTACCGGGATGA AACATCTAACTTGGAcctagaaaatataaaaagcagGTATTGCGAGTTGG TTTTCCGTGAAATAGTTTTTTCTGGAGATTTAGacttttaaagcaatttt tacGACTTTGACTTTCAGAACACCAAAAACGAATGAaagatttgatgaag aagatttCACGCACAGAGGAGCTGGTAGGTCTTCATCACGTGACGTCTCA CATTTCACCGAATTACACAAATCTTCTGATTCGTCGCTCAAACTTCTCTC AACCGATTCTTTTTGTAGGAGAAAGTGAAAGACCACAACGCAGATGGATT CTTTCGGGAGAAATATTATTCAATGCAAGATAAATACCAGGTTGAGGTAT GGCTGAACCGATTAATTAATCATCCCTATAACTCGTACCAGGGCCATCGC CCAATGACATATTCCTCCCGAACAATTTCCCGAACAACTGTTTCCGAAGA TAATAACGCTCCTGCCTCACGATATaacgagaaagaaaaaaagaaattaa agtcTTTGAATAAACTTATAAGTCTCAATTTCTCATTCTCTACCTTCAGG TTGCAAAGAATGAGGATTTGAAGAAACTAAATGAAGAGCTTTTGCTTTCA CAACGAGAAACTCTACGTGAGGTGGATGAGTTGCGCGTTGCTTTAAGTTT GGCACGTCAAGGTGAGAaggttatatttttttatgtctTGAAGCTCTTAA AGAAAACCACCAGTCCCTTTTCTTTTACGTCCGAGACGAACTTGCTGTGA CTGTATTCAAATAGATTTGACTTCATTTTGACAACAGCAATATAAtataa ttcataaaaatacatcaaatatgggtttcgaggtagatccaagTCTAGAA CCAagaatctgaggaaaatttcggtaaaagtaaagtaaattaaattgatt ttgatttgaacAGAGAAAGACAAACTACAACGTCTGCAAGCACAACAAAA AGTCTCTAAAGCTAGACAGTAAGTTTTCTTTACTCCTCGTACTCTACTTT TTAAGAACACTATTGATTGAACATTGGCTTATCATGAAATCTTCGTAAAA AATTCGATTCAATAGTCACGTTCTTCAAACATTGGCTGTTGATGAAATTA ATAAAAGATGTCAATGATATTTTCAGGAACACAAATCCTTCATCACGGAA CCACCAAAAAACACCGATCAAACGTCCTTCTTGGACAGAAGATGACATCA TACATTACCATAGCAACAATAAAGAAAATAGGTTTCCACAGCAACCGGAA GAACAAAAGAGTGAAAGCGAGGAAGATGTCCTGGAGAAACTCGAAAGAGA AGCAAAGGTGTGCAAGATTTATTGAAATttaaccaatcaatcaatcaatc aatcaatcaattctTCAAAAAAAGCACTTAATGTTTCGccataaattcaa aattattgaaTATTGCTCGTTAACTAGAGCAATTAGCTTCAAAAACAATT CCATAAATTTCAAATACCAATGTTCTGGACATAGTTAGGTTGACCAGCAA GAATTCTAGACCGAACTTTGCGAATCACTGTTTTGTCTTTTCATGTATCT CACAAGATGTTTTGTTCATGTTTTAGTGCTTAGAGCAATCATACAATGAC TTCAAAGAACGACAAAAACAAGAAGCGAAGAGCACGTCACGTGTTCACTT CGACCCATTCGTGCAACGAAGAAGCACCAGTACCTTCAACAGTACTGATA TCACCAGAACCTTGGAAATTCGCGATGAAAGCTCCATTAAACCTTCTAAC AAAATAACAACCAGTATAATGTTTagatttgtaaaattttcttaCCATTT CACGGAGCAAAGTTTATGCCAAAATTATAAGTTAACAGAGAAATGTATTT GTAAACAACGATAGGCCATAGTAGACCATAATATTCAATTCTCAATAAAT GCTTACATTTCATTCAACATTATTTCCTTTCCAGCGCACAACAGTGGAAA TGGGACCTTGCTACCACTATCATCAACGCAAACGCCTGGTGGTCAAAGTG CTGTAGAAGGGGGTGGCGGTGCTCCGTCGTTTGGGTTGTCACTTGTCCCT CAACAAAGTCAGCCAAGGTATGGTCTCTTATCTCTTTTACAGTTTCTTGC CTGCAttgtttattattattaaagtcAATCATGATAGGTATCTTTTACTT TGTATGTATCTTGACTTTGCAGACACGACAGATCACGTGTCACGAGGACG GTAAACGAAACAACAGATCAACGACCGGTCACCATCGCAACATGTCAATC GCTGACACAACATCCTTTAACAGACACTACCAATATCCACACACAACACA TATACGACACACGTACCAACCTCACACAATACCCTCTCGGTGACACCGAA ATTAACACGATTTTTGAACAATCGGAGCCGGAACAGGATGAACAGACAGA CGTGTCTGCGGAATCATCCAAACATACCGACCAATCGAAAGTGATTGCAA GCACAACGGTGCCTAACAAAACGACCTCCGTTGAGCGCGAATACGGATTG AAAGAAACGAGCATTGAAACTTTCGACAGCCCCGATAAACGTGTTCACCC TCAAGAAGAAGATGTCTTTTTTACACCAGCCAAAGGTTTAGTGTTGGGTT TACAGGAGACTCCTGAAAGAGACGAAGTGAAGAGTGACATTTCTTCCAGT AAAGATGATGGAGGTTCCATGAAAGAGAAGGACTTGCTGAGAACGGAGAG TGTCACCGAAGACAGTAGTGTGAAATCACTTTCCATAAACGACGACCATG GAGAGCATGAAGAGGAGAAGAAAGAGGAGAACAATGTGATGGACCATTAC CTTCAGATGGTCAtacaacaaaagaacaaaagcaCAACCAACGACCTCTC TGCTACACACGACGAGAAGAAACAAGAGGAAAAGGTAACTAATCATATTT TACAAATCTTTCATGCCTAAGCACCTCTGCGTTTCCTATACATACTGTTG GGTGGAGCTTTAATTATCTTCATtattatcttttctttttccataGGGGA ATGATGGTTACGAAGACGACTTCGACATTCCACTCTCAAATGATGAAGAT GAAGTGCGTTTGgagtatgtttttttttcctttctttcagTCAACCGGCT TCTCTTGCTCTGTTTTTATCCACCTGGTCGTTGAAAGGTCTTCAGTCCTA AACGAAAACATACGTTTCCAGAAACCATAGAAGCTCTAAACATTCATCTT TATCTTTCGTTCTTCTTCTGTTTTCAGTGACGCAAGCACCTCCGAATATG AGTGGTGAAGTAAACCACGATGAACAATTTGTCATTTCTTTGTCTTGTAA ATACACTTGTCTTGTAAATAACATTCATTTATATACATGCTAGAAAAGTA GATTACAAATATATATGATTCATAATTTATGAAATgtaactttgaaattt taaagtaCTGTGCAAGATTGAGCCTCTAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064367TCONS_00064367Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064367-proteinTCONS_00064367-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_412supercontigscaffold_412:60430..71509 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
18.44 18.05 6.25 4.86 27.12 20.87 11.59 11.02 8.48 8.76 9.5 7.46 6.68 7.68 7.39 10.43 9.12 10.61 3.51 2.92 6.25 6.45 13.49 13.7 20.43 19.47 1.87 1.99 7.66 8.33