XLOC_040523 (gene) - C. hemisphaerica

Overview
NameXLOC_040523
Unique NameXLOC_040523
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_419:345396..347486-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040523 ID=XLOC_040523|Name=XLOC_040523|organism=Clytia hemisphaerica|type=gene|length=2091bp|location=Sequence derived from alignment at scaffold_419:345396..347486- (Clytia hemisphaerica)
ATGCAAAAAAAATTTCATTAGTGGAAAAGGAAGATCTGGTGGTGTCAAAC
AAAAACAGGTCAATACAATAAGAGGCATAACATTTGAACGATAAGAATTT
AAAAAGGAAGTTTGAAATTGCAGAGTATTCATTAATTATTAATCAAGTCT
CCAGTCAGGAAAGCTCTTGCATGAATTTCTTCCTTTTCATTGTGGGAGAC
TTTGACTTTACTGTAGATTTTCTGGATAAAGTATATGGTATATGGGATAT
TGGAGTGATATTTGAGACACGTTGTATTGCATCAAAACTAAAGACAATAA
AAACGCAATATTGAAATAAAGCTGCTGCTGGAAAAGTAAAAAAGAAGACT
GTACAGATTGACCTTCAAGGGTAAAGAGACACCTGGGTAAAGCAAGGAAG
AGAATTGATGATGATTTTTGTACGAAGTTTATTATTATTAACATTATCAT
TCAGTCTTGGATTTTCGCTTAGTTTACCAAACGTTCAGCGCGATTTTGCA
GATCCTGCCGACTCAAAACCAAGGATGAATGAAAAATCAACTCCCCAAAA
CACCACCATGACGCCATTATGGATTCTTGGAAAAACTGCTAAAACTGGAC
AGGAAGGAGCTGGCAGCAGTAAGGAGGTAGCAGGCAAACCATTTGATGAA
ATAGGCTCAAATGACAACGACACCTACATTATTCTACCTGAGAATGGAAC
AGCTATGGAGGTTCTCTGTGGACATTTAGAAATCGACCCATCAGATTGTA
CTTGCAAGAAAATTGAAGAGATTATACCTGGGTACTGCGAACCAGAAGAG
TTACCCTGCCAAGTTGACTCGTCAGATATTGCAGAGAAATCCTTAATCGT
CTTTATATCTATCTTAGGTATAATCGGTAACATCCTAGTCTTGATCGTAC
GCGTCCGAAATTGGAAGAAATCCTTACATTACCGGCTCATCAGTGGCCTC
GCGCTCGCAGATTTGACTTTTTGTTGTATGTTTTTGTTTATCTCGATCCC
GGCAATTTGGCTCTGTCGTTGGCCTCTTGGGAAATTTTTATGCACCCTGT
TAAGAACAATCCTGTTCATGAGCTCCAATGTCGACTTAGGATTTATTCTG
ATTATCGCTATTGAACGGTATATTGGAATAGTTCATCCGTTCCAGGGTGG
CGCCTCGGCTTGTAAAATCTATTGTATGGTTGGTATCAACCTGTTGGCAA
GCTTCCTGGCTGGATTTCCATTCTTCTTTATATTCAAAGTAGATTCCAGT
GGCAAATGCACTGAAGATTGGTCGATGTTTCTGTCAAACGCATCTTACGT
TTACGGTTGGGTCAGTAATATTTTCCTGTTCCTTATCCCTATTATTATCA
CCGCCTTGTTATACTGGCGTGGTTTGAAGACCCTCAAATCGACCCTGTTT
CGCCAAGAGATGATGTTAACGTTAGACGAAGCTTCCCGTAAAAATTTGGT
CAGTGAAAATCACCGTATTTTACGCATCATTTCAACCATCTTGCTTGCTT
TCCTCCTATTGGTTGGCCCGAATCACGTGGCATGGTTTTTAAGTGATAAT
TTCACTTTAGCCGGTGGTTCACGTTTAGTTTTCTTCAAAATTTCATCCGT
CGCTTACGCTATTCATACAAGTATCAACCCTATCATTTATTCCATTATTG
ATCGAAAGTTCCGCCGCAACGTCTATTACATGTTACGTAAAGGGAGACGC
CGTAAGTCCTTCACTACGACTGCGACCGCTGTTCATTTTTCACCAGTTCA
CACTCAAGTTATGATTGAAAATGGTAACGGCTCTTTAGGATCGGCCGTCG
GCTCTTCGCGGCCAAACAGTAGGACTAGTATACGAAACGGTGAACAACCA
TTGGAATTGACTGAACAACCCGTTTGAGAGAAATGTTTTTAAGAAAATAT
TTAAAAATGTGAATGATTCGCCACGGCTGCTAGAAAACGTCAAAGCAGAT
GGACACATCCATAAACCGTTAAATGAACATTGAAACAACGTGGTTGTGTA
CCGGTTACCATGGCAACAGTGACATGACTATTGCATGATTTTGATAAGAA
AACTACCGCCTTTTTTGGAGATTACATGCTGATTTAGAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064614TCONS_00064614Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064614-proteinTCONS_00064614-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_419supercontigscaffold_419:345396..347486 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PTAFRplatelet-activating factor receptor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.08	0.02	0.11	0.1	0.43	0.78	9.11	8.64	4.94	4.05	2.94	4.13	2.39	2.75	2.52	3.14	0.47	0.67	0.62	0.73	0.38	0.37	0.02	0.06	0.06	0.09	0	0	0	0.02