XLOC_040559 (gene) - C. hemisphaerica

Overview
NameXLOC_040559
Unique NameXLOC_040559
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_420:226401..228702-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040559 ID=XLOC_040559|Name=XLOC_040559|organism=Clytia hemisphaerica|type=gene|length=2302bp|location=Sequence derived from alignment at scaffold_420:226401..228702- (Clytia hemisphaerica)
AGAAAATTCTAAAGATACGAAAAGATGGAGGATCAGTTTCCTATTATTGA
TATTTCAAAACTGGTTGCAAGCCAAGGTAAAGATGAAACCATTCTCAAGG
AAACTGCCAATGAACTCATGGATGGATTCTCAAAATGGGGTTTCATTTAT
TTGAAAGGACACCCAATAACTGAAGAATCAATCGAGAAAATGTTTCGAGA
TTCAGAAGCATTCTTCAAACAACCTGTGGAAAAGAAAAATGAAGTTTTGA
TCGATAGCAGTGATACAGATTACATCATTGGATATGTACCATTCAAAAAG
GAGACCTTTGATGCATCCAAACCGTTCGATTTGAAGGAAGCATTCGACTA
TATGCACCACATGCGCCCAGAAATGAAATCAAAAGTATCACCTGAATTTT
TCGAGCTTTTTAAGAACTTTTTTACGCAATGTCATGATTTGACGTTCTTG
ATTTTTCGGTTGTTGGCAATATCGTTGGATCTTGAAGACTTGGAGTTCTT
TCACAAGGCTCATGATAAGTTGGGACGGTTAGGAAACACAACTCTTCTAC
GATCGCTTTATTATCCAGCTGTGGAGCGATCGGATATCTTAGAGGAACAA
AGCAGATGTGCTGAGCATACTGACTATGGCACAGTCACTCTTCTCTTTCA
AAATTCTGGTGGTCTAGAGGTAAAATTTGTTTAAAACTTCTGTTTTTATA
ATTTAGAGATCAGATAGATACCTCTTTAGGCGTAAAAAGATGAAAAATAG
ACCGTCCATAAAAAAAGACCTTATCTGTGGATTAATGATAAGAGCAGTGA
AACTAATCATTGCAAGAAATGCGAGCCACCGGCTGATAATTTACTTTCAA
TCTCCAATAACAAATCTGGGAATAAGATCTTCACCGGGAGGCTATATATA
TTGAGTATTATACCATGTCACATTGTCTAAAGCANGCAGTGAAACTAATC
ATTGCAAGAAATGCGAGCCACCGGCTGATAATTAACTTTCAATCTCCAAT
AACAAATCTGGGAATAAGATCTTCACCGGGAGGCTATATATATTGAGTAT
TATACCATGTCACATTGTCTAAAGCATTTACACCAAAAAATGTCGACTTG
TATCGGAGAAGATAGGTTTTTATATAGCGTGGTTAAAACTCATGAAGGTC
CCGGGGGGGGGTACTACCCTTGTCGACCGACGGAGGTGCTCCGCTGAGGT
TCGAAAAATGGACCCTACGTGGGACTGAAATTCCAAAATTTTCTCAAATT
TTCTACTTTTTCCCTAAATTTTCCAAAAATAGGCACCCTACGAGGGACCG
ATTTTTCTATTTTGGTGTTTTTGCGACCCTACCTGGGACTCGTGGAGGTT
AAAAAAGGTACCCTGACCAGCGGAGCATCCCCGTAACCCATTTTGCCCTA
GTATGAAGGTACATTTCTTCAAAGTGAATCGTTGTGTTGAAACAGCTGTC
TTGATTTGATTATGCTTAGTAGCCATTACATTGTAATCATTTTTGTTTTT
AGGTCAAGTCACCATCAGGAGATTTCATCAAAGCTAAAGTAATTCCTGGT
ACCATAGTTGTCAACGCTGCAGATTTGATGGAGCGATGGGCTAGCGGAAG
AATCAAATCGACACCACATCGAGTCACTATCCAAACAGATATGTCGAAAC
CAAGACAATGTTTGGCTTTCTTTGTATCACCAGATAATGATTATCTGGTC
GAATGTGTGGATGGGTCTGATAAGTATGAACCAATCAACTCTTATGATTA
TTTGGATAGACGTTTCAAAGAGACTTTAAGCAAAAATTGATCGCTTTGAA
GTCATCTATAATGTCGGTCGAAATATATTGGGAATTTTGGTTAATTCCTC
CTTTTAGCTATTTAAAGTTCGGGCGAGAAAGTGGTTTTTGGGCTAATTGA
TATTCGAATAGTTCAATTCGGGAGAAGTTTATAGACTTGCAGGCTATATT
TTGAGCCCTATTGGACCATTCTTGGACTTTTGAATCCTCATATCCTAAGC
TCTTTAAGTCTTAAGTCTAGCGTTAAAACTCAGACTTAAAACTTTACCCG
TCCAACATAATTTAGAACGCTTCCAAATCGTTTGTGGTTGTAAGATTTCG
TGGGAATTTCCCTTTTTTCTCAAAACCTTGATTGTATTTCTTTGCAAAAT
TTGCAATCTTATAACTACAACATAAATTTAAAATTCCATAGGCTATAGAA
ATAATTTTAAATAAAAACATAAAATACATCAACTGAATGATTGGTCAGCC
CCGGTGACCCTTCAAATCTCTTTCACGATTTTTTTCTTCGTTTAAGACTC
AA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064666TCONS_00064666Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064666-proteinTCONS_00064666-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_420supercontigscaffold_420:226401..228702 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.28	6.73	6.31	5.21	1.71	1.29	9.74	10.3	11.56	13.22	11.35	12.11	14.49	12.39	14.71	18.43	9.62	10.68	7.51	7.57	13.75	11.23	9.88	12.18	9.16	11.01	20.69	20.64	14.86	11.16