XLOC_040603 (gene) - C. hemisphaerica

Overview
NameXLOC_040603
Unique NameXLOC_040603
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_423:225434..230163+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040603 ID=XLOC_040603|Name=XLOC_040603|organism=Clytia hemisphaerica|type=gene|length=4730bp|location=Sequence derived from alignment at scaffold_423:225434..230163+ (Clytia hemisphaerica)
TATAAATAGTGTTGATGGTCGGTCAACATCGACATTACCATTGGACAAGC
ATCAGTATGAAGACTCTACTTTGCATCCAGGGTTTGTTGGTGatattatg
ttttcatgcaTCGAAAGCACAAACAAAGGATTGCAATGAACTGATAACCA
ACCCTGATGCTTTTACAACAAGTATGTTTCAGTCTGATAGATTTTTCTGC
CCTTTTCTGACTTGTTCTTGAAACGAgttcggtttttttttaatcaatgc
tTTGATGGGTAGAATTAAGTTTAGATTAAATTTGTGGATGGTCTATTTGG
AAATGAACTTGCTTAATGTAAACTTTAGCTTGCTGGTTGTCATAATTCGT
ATATTTTAACAAATCTTTGATATCCTAGGAAAATTTTACCGCCACCTATT
GTaattattaatttcgcttagcgaaagtattacgatagcctttctgcggc
ggcggcgggGGAGAATTTTTTTGGGGCGAAGATTATGGCGTTGGCGTTTG
ACCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNtaaagtagatttcagattagctttaatctctacttcttctt
tttcccatgcagttcaaattctaggcgaaattttcgacttcaagtcgtct
tgtttttcttttaaatcaatttctcaaaatattttgcagacAATCTTATA
TCTTTCTTTTGTGACTTCATTTTAGCAGAAGACAACTAGATCTGCGAAAT
TTTATACCATAAAAGTAACATTTGCGGTTGTACTTTAAATtagtcaaaaa
gtttttttacttaATAACAAAAGCTTATCAATTGGACTATGTTCTACTGT
CTTGCAAGGACAATTTGACTTGTCTTTGCAGCTTAGTGTTTAATCATTTT
CTTTTACAGGCCGGCAGTGTCATTTTCCGTTTTATTACCGCCGTAAATGG
TATTACACTTGTGCCAAGTCCAAGTTGTACAATTTTTGTTCCGTCGATCG
TGTTTATCGTGGAAAGTGGGCTGCTTGCACCAGGGCTACTCGTAAGTATA
TTACTTTACTTGTTGGTGNTCGTGTTTATCGTGGAAAGTGGGCTGCTTGC
ACCAGGGCTACTCGTAAGTATATTACTTTACTTGTTGGTGAATAAAAAGG
AAggtcttaaaaacaaaagacgTTCTTCATAacctgaaattttcattttg
cagAACCTTGATTACGAATACTCATGTAATAAGATAGCAGTCCAGTCAAA
AAACCCTGACTCGCTTGGAAGAATCGGATAAGAATCGAAATATTCTGCAA
TTCCATCCAATAAACCATATCATACACTACACTGACCACCCCTCTTAACC
GGGAAAACACCTCTAAATTCGGAAATTCCCAGTGACTTTTTTAGGTAGAG
AATAGAATAAAATATAAGTCCGTCTCTAAATTTAATAGTAAATGTGTGTT
AATCTTCTTCGGGGCTCTCGCAAACCCAACCGCGGCTTTTCACAAGGTCA
CTGGCGAAAGTGTGTCAAGCTTCTTATTATTTCTCTTTCAGCGGACCAAT
GTCAGAATCCGTTCTTTTACAAAGGAGTAAAGTATGAAGGGTGTTCAACA
AGATTCAGTCCAGTCCCTTGGTGTTCATTGGACCGAAATCATAAACGAGG
GAAAAGTAAATTCGCATATTGCCCAAAGAACCTTCCAGGACGTACGTAGT
AaattcttgttttatttttatcctCGTTATGTGTATTCAAAGACAAAATG
TCGTGATATTTTTAATCCTGTGCCAGGCAAATTTCCAGGGTTTTGAGCTG
CTACCGTCTTTATTTCAAAGATTAAGTTTGAATTCAGTTCGAAGAACAAA
ATAATCAACCCAGGCTCTGTTTAATTAGTTGGGAActattaaaacacaaa
gaattaactTCAGAATGGGCTTTTTCTGTTAATAAGGGCCTAGGACCATG
TACAAAAATtaggattgagtttcaaaattcaagcaaAGAATGAGTTTTTG
CCACCGTTGTCTGGTAGCAGAAAAGGCCTGGAAATTGACCTGTGTGCAAA
CAAGGTTCAAAGTGCTACTAATGTTTCATATTACTTTTAATAGACTTAGT
TCGACCtttttatcaaaagaatttATTCTACGTTATATAAGCAGTTCAGG
ATTCCCCAGCAAGGCTATTACTGAAGCGTTGCAAGTGGCTTGCTTAAGCA
CTGTGATATAGTGCGCAATATCCCGTTAGGCTTTTATAAAGACTTGACAC
TGTTGTTCAGCAGCATACTTGTTGGTAAATACATTGAAAGTTTTGCATCA
TTCTCAGCTTGAGATGATCACAACGGGNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGTGCTACTAATGTTTCATAT
TACTTTTAATAGACTTAGTTCGACCtttttatcaaaagaatttATTCTAC
GTTATATAAGCAGTTCAGTATTCCCCAGCAAGGCTATTACTGAAGCGTTG
CAAGTGGCTTGCTTAAGCACTGTGATATAGTGCGCAATATCCCGTTAGGC
TTTTTTAAAGACTTGACACTGTTGTTCAGCAGCATACTTGTTGGTAAATA
CATTGAAAGTTTTGCATCATTCTCAGCTTGAGATGATCACAACGGGACGT
TTCACGTCACACAGTTATGTTTGTCACAAATTAAATTGTATGCACAGTTT
TGCTCCTACCTAGAAAGCATCGAACCTTCAAAGACATACTTTTTCTTAGG
ATGATTAAACTAAGAAATGTTAAGTCACATCTGGTCACAGTTGTTTCTAG
ACATCATTGTCATACAAAAGCAacattttcaaatgtaaacgtGATCAAAC
AATACTTTTATCAACCCTTAAAGTGTTAGGAGAATTTAAGGGTTGATAAA
TGTATTTTCCTAATTCTTCTGCTTTTTCCTTTTACTCATTGTTACTCCCT
AACTGAAGCAAATTCTATTTATCACCAAATTTTCAGGAAAGTACGCCCGC
TTACATCTACAAAGAGGTTTATGCAGGAAATCGTTGAGTTTGACATTCGA
CAAACCTGTCACTCAGTTCAGATCAGGATGTTTGATCTACAAGTCTAAAC
GCTTGAATACGCTGAATTTTGTTGTCTCCAAAAGATGTTGCAGAATCAAG
TCTTTTGGCTTCTACGTTAGTTACAAAGGGGCTCCACCCAAACTCGTCGA
TGTCGAAATCCATGGTAAAAGTATCTGCNN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064739TCONS_00064739Clytia hemisphaericatranscript
TCONS_00064740TCONS_00064740Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064739-proteinTCONS_00064739-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_423supercontigscaffold_423:225434..230163 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0.2	0.09	0.26	0.16	0	0.52	0	0.05	0	0.09	10.8	16.12	0	0.34	39.78	45.16	53.47	76.18	96.82	121.07	0	0	0	0