XLOC_040880 (gene) - C. hemisphaerica

Overview


Name	XLOC_040880
Unique Name	XLOC_040880
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_433:305351..314739-

gene from alignment at scaffold_433:305351..314739-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_040880 ID=XLOC_040880|Name=XLOC_040880|organism=Clytia hemisphaerica|type=gene|length=9389bp|location=Sequence derived from alignment at scaffold_433:305351..314739- (Clytia hemisphaerica)
AATTAAAAGAAGCCTGGTGTTTGGGTACTTTGTTCATAAAGTGAATATCA
CTGGCAGAAGCAAAAGGTTTGTGATTTTTTTCTTTGTTTCTTTTTATTAA
TTTCGTTTTCCTCCAAAAAGGTTCCTTTTTGGGATTTCGAACAAGAGTAA
TTTTAGCGTATATTAGCGAGTCAGGAAAATCTTGATTTTTTTTGGATTTA
TTTTAGCGAATCACGATTTCAAAAAATTTCGCGTGGATAAATTTTNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNATTCGGCGTGTTTTAGCGAGATTAATTTTAGC
GAAAATAGGGAAAACTCGCTAAAACGCTAAAATTAGTCTCGCTAAAATTT
CTACGATTAAAGTAGCTGTTATTCTGCTATTTCTCCAGTTTAGCTAAAAT
CTTATACAATGATTGTCATTCTGTCTGACTCCTTAGGAGGATTTTGAATC
GTATTCCCTTTATGCTCGAGTTAGGAATGTTGTGATATTCTTATTTTGCT
CAGAATTTCAATTATTTTTGTTGAAGAATTCAACTTTTGAAAATTGTACA
TTTTTTAGGAAATTTTTTCTCACAGTTTTGCCCGTAGCATAACGGGTCCT
AAGGAATAGCCCTATACTAGTAGTCCAGAAACTTCAAAAAGGGTTGTGAA
CGTGCTTTTTACATTGCTGAAGTAGAACAAAGAATAGTGAGGCATAAAAA
CAATTTTTAAATCCTTCGGATGGCCCAGTCGGAGAGGGGAGGGCTGAACC
CATAACCTTTATCATTTTAATGCTATAGTTGCCGGTTAAACGGAGTAAAA
GTACTACAGTACTTAAAAGTACTACAGCTAAAACATGATATTTTTCATTC
CTCAAACAAGGAATTTTTTTCCCTTTTCAAAGGCCCACAAAAATTCATGT
CTCTATTGTTCAACATAATTATCAAAGTCAACAAAATTAAGGCCAAAAGG
AGGGGTGATCGTGTGTAGAAAAACAGAGCCTTACAAATAATAGAGGGAAC
ATGGCTAATTTTCTTTTATTTTCTTGACTTATTTTCTAAAAAGAGTGAAT
TTCTTTATATTTCTTTCATTCCCTTCTTGAAGGGATATCGACTTTTATCA
TTTGGACGCTACAGGCTTTTTGTGTTTTTGCTTTTTGTTCCTTTTCTGTA
GTACTAGTGATTATGCAAGCTCGGCCTTTTGGAAAGAAAGTGCTATGTGC
GTAGGTATAGTCTAGTTGCTCAAAACAATTTCATGAAATCAATAAAGAAA
CAGGTGTAGTGTGTGGAAGATTGATTTTGATTGCTTAGTTGGGTTGTTTT
GATTAGTACTAGTAATCGTATGGTTTGGAGTGCAATTAACGATTAATCAC
GAGTAACAAAGGAGAAAATAGTAATTTGCACAAGTCCGAAGGACAAGTGC
AAATTACGGTATTTTCTCTAATTTACACGACAGGTTCTTTTTGTTTAGTC
GTATTATTCTTATAAAGAAAGGAGCTTATAAGTTAAAATGACGGTTCATT
TTGTTTCGGGAAAAAAGAACCTTTAGTTAGTCTGAATCGCAGACTTCTAC
AAAACCCCAGATATCTATAAGCAGCACGAATCTGTGAATGCCACAGCAGC
CTAACCTTCAGTGTTCTAAAATTTGTGAATCTCTTTACTCAAAAACGTAA
GAGAACCAACATTTATCCGTCGTTTAGTCGTCTCCAGAAACTAATGATAT
GGTTTTTTCTTTGTTCTCAAATTTAGAGAACAGTCGATAGAAGTGTGTGA
ACTCAACCTATGCTATTGGGATATTCGGAGCTATTCGGACCCAGTGTCAA
AAAGCTCCCTCAGCAACACTGAGGGAGTGAGGAAATATTGGAGGGAGGGG
TGGACAACCAATTATGTCCAAAATTGTACCAAGCCTGATTTTATGTTAAC
ATGCATCCCGCGCGCAGAAAGCTATTCAAAAAGTAGCCTGGAAACTATGC
CATACACGTCTTTTTATAAGAATACGCTTTACAAGAATGTCCATGATGAA
AATGGCCAAAAAATTAAGAATAATGCTAAGAATATCGCCATCATGGAATT
TTGCTACTCAAGCTAAGAATGCCATTTTAGAGCATTTTCGATTATAAATT
GTGAATTACCCCCAAGACGCCAAGTAAGGCTCACTTCTTTCACAAAAATA
CCATTTTATGCTTGAGACTTATGTACTAAATGTTAAATCTAGTCTGAATT
AGGATCCTAACCTAACAATGGTGTAAGATATTTTAAGATGATTTTCCCAA
AAAAGTTAAGAATATCCATGATGAAATGGATTTACACCATTCTTATAAAA
AAAGCGTGTAACCAGTTTGTTGAATCTTTTGAAAATTTGATTGACGATGA
ATTCAGCAAAATGTTTTGATCACCATGGTGCATTTTCTTAGTTTTAGTCG
AGGCGAACCTCTTGCTTTTGAGATTTCATAGGAGGGAAAAACTATAACAG
CGGTTTTGAATTCGCGTACGTACTCTTCAAAAAAGATAAGAAAAAAATAT
CAAAGCAAAGAAAATATTTGATATCAAGATGGAGATATATTTCAAGATTT
TCGACCATATTGTGATAAAAAATGGTATTTTTTTATGCTTTTATTTTTCC
CTTTGAGTTCCTTTTGGTTCACCAACCCTTTGCTGGAGGTTTTTTAATTT
TGTTTCTTGAAGAAAAAACTTGTCCTGGTTTGATTCTTTATTTATGAGTT
GACTTGAGTGGGTCAAATTATTTTTCAAGAGTTGCCTAAAAGTGAAATTC
TCTACTTCCGACATTGGGTACCTAAGATATACCAAAACTTTTGGCAGTCT
GTACATTTATTGAGAAATGATAAAAAGTAATAACCCGTTTGAAAGATAAT
TTAAAGTTGATCAATTGAAATTTTTATAACGCTTTCACGAAAATTGAAAG
TTAGTATGAAAAACGAAGAAAACATTTCCAATCTCTAGGGAGATATGTGC
TAGGGATAGCAGATGTTTGTCTAATCAATACGTTTCAAAATTCCGACTTC
TTGTTACTGTGACTAAAATTTTGTGCAGAAATAGTGACGCTTAGTGAGTA
TATAAGGTATACTGATAGAAAAGTGACTCCCTTAGTGAAATTTTCTTAGA
AAAGTTTTTCACCTTGCAAGATTACAATGACATTTTGAAATTTTGTTTAT
CTTACACTATTCAGAGGGACTTTGGCGGAGGAATATGAACATTAAAAAAC
ATCGTCAACGCACCCGTTTTTGCGGATGGTGTATTCCGCCTAAAATTCGA
AATCCAATGGAGAAAGATAGCATCAAAGTAGTATCCTTTTATGTTTTTAT
TAGATAAATTTTCAATATAATAAACCTCCTTTCTCTCCGTAGATTAATTA
GCCTCCTGTGTTGCACACTATCTTTTTAAAGACCAACTTAGGCCATGAAA
ATTAACCAAAACCTTAGAATAAAATTCAGATAAAAATATACAAACTTGCA
ACAGAGGGTGGGTAGGAATTTACTGGTTCTTATAAAAAGATGTTCTATTC
TTTATGGATTAGTAACAACCTACGCACTAGAAGATGTTTCTTTTTTTCCT
ACTTTGATCAATTTTTATAATTTAATTTTCATTTTTCTCCTTTTCCCCTA
CCACCACACCTAAATGCCATCTTATCGTGTTTGAAATGCAAAGTCCCATT
TTTATTATGTGAAGTAAGGGATAGATTTCAATTTTGAAACTCAAATTTCG
AAATCAAAGACATTGAAAATAATAAAAAATAATTCTACATTTTCAATTGT
GGATAGCTGGGCATGAAACCATAGTTCGTATAAAAAACTCTGGTCTGGAA
GCTTATTGTTTTATCTTTTTGTTAGTTTTATCAAAAGATAAAAATCGATT
TGCTCGGTTTTTAATCACGTTACCAAGTACTCCTCTTGGTATTGGTTTAA
GATTTAATCACGTGATCAAAAAGCGAGCAAAAACAAACTAATTTCTCAAA
GGAATGAGAAACGGCAGTCATTCCAGTTGATAGTTTGACGTCACGTTGTA
CGAGAGAGTGTTGTTTGTATGATTTCTACTCATATCTTTGCTTACGGTGA
ACAGTTTATCTTCCCTTGAATTTCAACCTGTGTAGACAAACTGCAAGAAT
TTAATCGCACATGTCTCAATCATATTACTATTCAAAAAATCGAAGATGGA
GACCATGTAAAGCTTAATAGTCCGGCGGCGATCCAGGATCACCCTTACAA
TTAGTAAATATGGGTTTTTATTTTATTTTCCCATCATATAGTCCCTTGGG
ACCCCAAAACCAGTTTTTGCCAAGCTGGCAAAGCCGGGAAAAATTTTTTA
TGGGGGCTTGAAGGGGGTAGGGTCATTTTAGCCTGGGGGTCCTTAGAAAG
TCGATTTTTGAAGTTCTTATTTAGCTAAAACTGATTGTGCCATCAGATAG
AGCTTGAAGAGTAGATCTCCAGAATGGGGTCATTTGTCTCATTTGGCGGA
CTTAGTACCCCGGAATTGGCTGATACGTATTCAAAAATGCAATATTTTAT
GCTGACGTCAGCATTTTTGAGAGAATTTCCAGCGAAAGATACCAATTTTA
ACAGATGCGTCTCGAAGTGTACTATCGATTAGAGGGGTCATTTATAGGGT
TTCCTAGGCTAGATCATGAGATATTTGAGTTTGAAATTTTGCTGACTCAG
CGTTTTTCAACGTTTTTGGCCCTTTTATATACATATACCCACATATATAT
ATACACGCATATATCTAAAGTCTATTAGCCTCCGTCTCAGAACGCGGTCA
GAAGATTTTGCGGATAATTTCACAGCGAAAATGCATCCAGTGAAATGGGA
GTAATGTATCATGATTCAAGTCGACTGACATAATTATACACATAATACAT
GTTACAAGTTCTGCCTACGGATTCTCAAGCTCAGCTATTATAAAACTATT
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAT
CTTGAGAAACACTGGAAAAATAGGTTAGCATTCCCTGCCATAATTTCACA
GATTTCCTCTGCTTTCTGCTTGAAAACGCTGTCGCATAGCCGGCAGTGGT
CGAATTGAAGTTTGGCAAGATAATATGTGAGTTGACAAAGCAACGATTTG
TAACTTTTACTGATTCTTGAGCGTAGCGTTCAAACTGAAATACAAAATTG
AATGACTAATAAATAAACTGAAAATATGACAATGCGTGAAAATGACTAAG
TATGAAAAATTGACTAAGTATTGAGNNNNNNNNNTTGAGCGTAGCGTTCA
AACTGAAATACAAAATTGAATGACTAATAAATAAACTGAAAATATGACAA
TGCGTGAAAATGACTAAGTATGAAAAATTGACTAAGTGTTGAGCTCATAT
TGATTGATTAAGCAAAAAGTAATTGGAAAAATAAGGCTTGATTGAATAAT
TGAAATTGAAAAAGTTTGAGTAACTAAAAACTAAAAAATGAAAAAATCCA
AGATGGCCGCCAGGACCATGTGCTGAGCTAAACCTAAAGTGACTTGAGGC
AAAGACACACCTGGATGAAAACAAAAGGGATGAGAAGCAAAAGCAAACAA
GAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATA
TCTCTCCAACAATACCAAATTTATAAAGATTGAAGAATTCCTTCAAAAGT
TATAGGTAAAAGAAAAAAGAGTGCACACTTATCGTGAACAGACTTTAGTT
TTTTTACGATTCAACTGATTTAAGTCCACTGTACACGCTTTTTTATAAGA
ACATCCAAAGATTTTGAAGCCTTCTGATGTTCTTAACTTTTTGGGTTTTA
AGCCTAAAAATTTTTTTAAATGTTCTTATTTTAAACGCGTCCACATCAAG
GAAAAGAAAAAGTTTCTTAATAAACATTGAGTTTCATGTATGAAATAAAG
GTCCGAACCAAACGATTTGAATTCGAAATTTTCTTCAACCAGGGGGGGGA
GGGGTGGGTTGAATGAAAAAGTACGTACTTACCAGAAGGTATAGCCATGT
ACGTACGCTTGCGTACAGGGGGAGGGGGTACTCGATTTTCGACATTTTAG
TGCGTACGTACTATGTGGACGGCCCCATATCTAATTTCAGTACCCGTATT
GTAAAAGTATAGCTGAATTTCTTGAATAGTTGTCCGCAATAAGGGTTCAA
AAGTGCAAGAAATTTTTTTCTCTCTCAGTACTTTCTAAACGCTGGTAGAT
TTCAGAATTAAAGACATTAAACTCAAACTCTTGGTTCGAGTCACATTTTT
ATGGTTTTTGTTTTCTTTTTCAGATAAAGAACTCAACAACAAATATCGAC
ATGACTAGTTTTATCAACAATACTACGGTTCGACCAATCACATCAAACCT
AACGACACCATCTTTATTCTACGAACCGCCTCCTTATCCATGCATCTGGC
CTCTGTTCCCGCAATATTCATTCACCAGTCTAACTCTTGCAATTTTGATC
ATAACATTGAATGGTTTTGTCGTTTACCTATTCTTTCGAAACAAAATTCT
ACGCTTGCTGCCAGGAAATTATATCTTAGCAAGTTTAGCGGTTAATGATC
TCCTTAATGGTTTATTCCTTGTTTCCAAACTCTACCCGAATTTTTATCTC
CATAATAATGACTGTTCGAATAATCAACAAAAGTTTTTGAAAGCCGAATT
TCCAACAATAAGTAATACAATTTATCTTTTATTAATGTTATCTTCAATCC
TTCATTTGGTGTTATTATCAACCGATCGACTGATATACATCATTCATGCT
TTAACATATAACTCTATAGTCACCAAACGAAAGATGTTAAAAATCTTAGC
AATCACTTGGTTACTTTGCGGTATCTTCGCTGCCCTTAAGTTCCTGTGGA
GTCTCAAAAGTGGACCTTTAAATCCATATCGGAAATCAATCAAGATCTAC
GCTGCAATCACCATAGCTGTTTTATTCATCGGCCTTCCGTCTATAATTCT
ACTTATCCAGTCTATCATTATGGTGTTAATGGTACGCAGGCTAGACAATA
AAAGTAGCCCGGATCCTAATAAACGAACGGGAGGTTGTAAAGCGTTTGTA
CTGTACATGTTTATGTATTTAAAGTTCATGGTTTTTGCGTACCCCTATCT
GATTATCATGTTGATGTTTCAATTCGGTGCATTTGAGCCTCCTCTTATTG
CACCGTCAATGAACGCCATTGTTATTTGTACCGTTATTCGGTTTGTACCT
TGTCTCGTTAACCCATGTTTATACAGCTTACAAAATAAAGATTTTAGGAA
AGTTATCAAGACTTATTTGAAATATTGTCGGAAAACTTCGCAGAGTTATG
CAATGGTTAGGAAAACGGGAGCCTCGAATTATTTGGGGACACTCTCGCCT
CAGACAAATCTTTATAAAATGAACGGTGATTCTACGGAAGAAAGTTTGGT
CAATTTATGAAATGAAAACTCTTACATGATGAATTAAATAATAAACTACC
TAACATCCAACAGTTGATTGATTGTAAGTTGTAAGTGGGTTTGTTGGCTG
TTGGGTTTTGCCACTCGTTATTTAATATTTTTCAAATTTGAAGTCAAACA
GTTGTACATTTATTAAAGTCAGTCTTGATATAATCTGCA

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00065204	TCONS_00065204	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00065204-protein	TCONS_00065204-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_433	supercontig	scaffold_433:305351..314739 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.09	0.06	0.07	0.03	0.24	0.1	0.19	0.25	0.31	0.19	0.12	0.28	1.27	0.79	0.22	0.48	0.09	0.3	2.57	2.32	0.41	0.34	0.21	0.28	0.36	0.41	0.12	0.13	0.03	0.41

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XLOC_040880 (gene) - C. hemisphaerica