XLOC_040913 (gene) - C. hemisphaerica

Overview
NameXLOC_040913
Unique NameXLOC_040913
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_435:52240..59590+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040913 ID=XLOC_040913|Name=XLOC_040913|organism=Clytia hemisphaerica|type=gene|length=7351bp|location=Sequence derived from alignment at scaffold_435:52240..59590+ (Clytia hemisphaerica)
GATAAAACAGTAAAtagaaactttaaaatgagTGAAATCACATTATTTCA TGGAAAAGATGAAAAAACTTCAGTTTCTGTGCATACTTGTGGTGCAACAG TTACATCTTGGAAAATTAATGGTcaagaaaagatttttgttaGCACTCTT GCTAAACGTGATGGAAGCAAAGCTATAAGGTATTTCATAATATTACAAAC ATTTCAATCAGCTTcggcaaaattaatttttactgTAGAAAACTAGACAA ATAGTATTGGTTATCgggcattttgttttgaaagttgatgTTGTGGGAAC GTTTACGTCAAAAAGGTGATGAAAGGAGTCGGTTTATCGTATGACGTCAA AATATCAAAGTCTTTTTATTGGAGTGCTGACAGATCGAAATACATACGTA TTTAGTGTCATTCAACTCCAATAGACTCTGACTCAACCCCCTTTGGTTTT ATGAGTTATAAAAGCAACATTATTGACGATCAGATATTGTTAATCCTTAT CTATAATATACCTTAAGCGAATTATTTTTTGCGGGGTTAAATTTGACGAA TTTATCCTGGTCAAAACTTTTGGCTGATCGCCAAATTTAGTccacgcaaa aattaatccactatGAAATTATAGTAAAAATCAATCAACGATACCAATAT TGTTTTTCAGAGGTGGAATTCCTTTATGTTTTCCACAATTTGGTCCATGG GATAGTGGCAGACCACAGCATGGTTTTGCAAGGAACTCAAACGATTgggt tttgaaagaaaagaaagtggACACGAATGGAGATGCAACAGTGAGTGGCT TTATTTAAACTCTTAGTAGTTTATTTTAAAAGTGATGTTGCTTTTGTCAA TGTTGTGCGTGTCTTAATGCTCACTTATGTTATTTGCTTGATAAAGCCTT GTCAGGAAAAAGTAAGTCGAAATCCCACTCAACAAAAAGTGCACACCCTT GGAAGATGTTGAAGAAAGAAAGCTTTTTATAATCGATCATGCCATGGTAT Ngggggcttacatatattgtagattattttccagcactcttatgaaattt ggtctgcatgaaaagaagttctttattttcactaaaaagtggtattctAT TTATCATTAAAAAGGAGGTGTCAAGAAgggggggatcatttaagaagggg cgGTCAGACCCCTTTCTGCACTATGAATCCCCTCAACAAAAAGTGCCCAC CCTTGGAAGTTATTGAAGAAAGGAGTTGAAGAAAGAAAGCTTTTTATAAT CAATCATGTCATGGTATATCCTCATCAACCTTCCATGACCCCCCTAAACC TTAATTTAATATGAAAACAGTCAGTTTTCCAATCCAAGAGACAAAGTTTT TATCTTCCTCTCCATTCAGACATGACTATTGGCTTTTCTGTTTAGATTGT TATGGTGCTTACTGACAATGAAAACACAAGAAAATTATGGGATTTCAAAT TCACGTTTTTGTATACCGTCAAGCTTACTCTGACTGAATTGACATTAAAT GCAAGCGTGGAGAACAGAAGCGACAGTGACTTTGATCTGACATTTTGCTT TCACACTTATTTGAAAGTTCCTCAAATATCTGGTGCCACAGTTCAAGGTG AGATTCACAGAACTCTAAAATAAGGACTGGAACAAAATGGTTTTCAAATA AAgataaaagtttcaaaagattatatttccatttttgatactttttaatg atccattatttttcagaaaagCAAGTTTTTTTGCTGTTATTCATTCTGGT GttgatttttgagtttttgttaaaagtctcaattaaaaaaaagattactC TATTTATTTGTGACCTGCTAGTGTCTTTGAGGTTTTATCGATCAAAAACC TAAATTTATGTAGTTTCAATTTTGGCTTTACTCAGCTGGTTACATGTGAA AGTGGAAGTGAGATTGGTGTATGCTTTAGATTAACGGCAAGCTTTGATTT ACACCAACCATTTTTACGCTCATTTGCAGCATTGTTAGATGTGTGTAGCA TTTGTAAACAGCTTAACTATCGAGCATTTGCAGTCTgtttatttcaaaaa gaaaatcgctCAAAGTTAAAGCATCATGCACGGAGAAGAATATTGTCAAA TAAATCATCAAAATGCAGTGGTTTTAACTCCTGGAAATCTGTCTagtgga aatattttttaagtatttttgtcaCACTCAATAAAccttgaaagaagaaa attcgttAATTAAACTCAACGTCACTGTCCATATTCACCAACGTCCCGTC CATATTCACCGACGTTCCGTCCATATTCACCGACGTCGATTTCACACTGA AAATGACATTCGATGAGACGACGTGGCTTAATGATTCGTCTCCTGTCTCC CCAATCAAAGAACCCTGGAGCAATCACGATGCAGTCGATGCACCTCTATG TAAACAATGTGAAAACTTGAATCTTGCATTTCTGGATCCGAATTGTAAAG GATGTTATAGATTGATAATCGATCCTAAAACGAGCATTGCTCAATTGTTT GCCATCATACGACAATGGGTTCCACAAGTACAGAAAAATATGGATCTACT CGTCACAGAAATCCTCAAAAGAGGTTTAAATATAAACGATCGAGATAACC TGACCGACATGACTCTGTTGCATTACGTTGCGAAAGCAGGAGCTGATGGA ATGTCTGATCCTCAAAGGACAGCTGAACTGACCAGTTCTTTGATCAATAA AGGGATTCTGATCAATGCAAAATGTCAATGGACAGATATGTCAGCTTTGC ATTATGCAGTATTCTTTGATGCTTACTCTGTTGTGAAAGTCATCCTTGAC AACGAGTCGTTTAATGATTTGGACAGACCTTGTAAGGAGTATAATGGTGG AAGTGTTTTGCATATTGGGTGTCAGAATCTGAGCTTCAAATCTGTTTCAT TGCTACTTGAGAACAGTTCCAATCCTCATTTTGTGGATGAAAGTGGGAAG AAACCGATTGATTACATACCCAATGAAgacgaaattgaaaatgaagatgt aaAGAAGATCGCTTCACTCATGAGAGATGAACTGACTGTAGCTATGCAAA ATATTGATCCACAATTCAAACAGAATTTAAACCACGCCGTACTAAAAGCA TTAGGGTTAGATTTACATAGTCGGGTTATTGTTGCTGGCAAAGTTGGATT ACTTAGATTCGCAGGATCAACTGAATTTGCATCAGGTGTATGGGGCGGTA TAGAACTCGAAGAAAAGACTGCTAAAAATGATGGTAGTGTGGCTGGGGTG CAATACTTCCAATGTAAACCGAACCATGGTATTTTTACGCCGTTAACGCT AGTCAAGAAATTTGATGTAGACTATTTACTAGTCTCTCCTTCTCCTCCCG CGTCACCAGTACCTGCGAACACATCTGCATCCTTCGATAATGTTGCAATG TTTGGTTTGACGCTTGGAGAAAAGGTCATTGTTGCCGGTCAGAAGACCGG ATTTGTTCGATACCGTGGACCAACAAAGTTCTCCCCGGGTACTTGGGTTG GCGTTGAACTTGAAGATCCCGTTGGGAAAAATGATGGCTCGGTAGGAGAC TTTCGTTACTTTCGATGTGAGCCTGATCGTGGTATATTCGCTCCACTTCC TCAGATACAAAGGATAGAGGAGGTTATCGAGGAAGAATGTAGTTCAATCG AAATACCGAACaccatcaaaaaatttcaaatgaagAAGCGGATTGAGGGA GAtggagagaaaaagaaaatattcttgaaattaGATTTGAAGTCCATTAC ACCTCAAGAAGACATTGAAGAGGAGAACGACCGAGACTCACTTGAAGAGA GTgaacaaaaatcaaatgaaaaacgTAAACACTCCAGGATCAATCCTGGT GTTAGTGCAAACATTCAACAGCTCAGCCAACCGAAGAGAAATCACCAAAA ACTTGACCGAACCTTGGGCGCTCAAATTAACTTCACTTTAAAGACGGGGA TGAGTGTTTATCTTAATGGACAACTTGGTTTAGTTAGATTCATTGGACGT GTTGAATTCGCCAAAGGCGTTTGGTTGGGCGTTGAATTGAGAAAGCCTTA CGGGAAGAACGACGGGTCAGTTGAAGGGCGCCGGTATTTTACGTGTGAAC AGAATTACGGTTTAATGACACGCCCATCAAGGGCGACATGCCGTGGTATC AATTGTGAACAGTTAATCGACCTCAAATTCAGATGATCTCCTCTCACCAA CGCCAAAGCTGAACGTATTTAGCTGTTTCGTTGTTTCGTTGAGTCCACAT TTAATACGAACGACAATGATTCCATACTAAGAATATTATTATTGTTCACT TGAATGGTGACCCTCCTCATTTAGCCGTTAATATTAATAAAgcttttcta gttttttttatgaacatgTTTTGTATATCATAACGATGAACCTATAATAT CTTACAATCTTAAACAATATATTACAATCACTTCAAAGTTGGTCAGTACG AACTATCCATCTTGACTGACGTCAAGAGGTCTGGATTCGATTCTCAATTG TTTTTGTCATTCGTTTTGAAGCTTTAATGCACCCTTGTCCCTGCCAATCT ATTCCGTTGGAAAAGATAGGTTTGCAATAACTCTGTCCTGTCGGTGATTG GGCTATGTATGTGTTGGTTGCGAAATTCATCTTGAATGATGCGAAAGTGA ATAAGCTTAAACTTGTCTATGCATATTTTACGCCTCCATTTAAAAGTCAC ACATCAGTGTCTCGGCAGTTTTAACCGTCGCAGTGACGTCTCTAATTAAC TATACGACTCGTAGACGGCTGATGAGAAACCTCGAACCCTCTTAAAAATG AATCCTTACCCATAaatggatttctttttttacagGGCTGAATGGATTAA CTTATGTGGACAAAACAGAAGGAGGTCAACTAACAATAgaagaaaatgac gtcattaagaTTGAAGGATTTGTAGATCGTGTCTATCAAGATGCACCTGA CGTAGTGGTGGTTCAATTGCATGACAAAGAGAAAATCACTCTCAAAAAAG TATGTACTTTCATTACAATTTTCACGTTCTCGGGTCTTGTTTTTCCGAGT TAAAGAttgcattttttgttttcaattattcaAACTGGCTGAAGAACTTT GTATTGAAGCACTGACGTGGTTAAGTGGCGATGGTCTTCTTTCgattctt tgccacggaaattcatgtgacatcttttttaaccaataagatttaataat ttcgagggtaaaacaaacactatggtttaactcactaaaagattatgttt acCGGAAACACATAATcaatctttagtaagtgttctgttgtaccccagtt ctgacgtcatgccgTGACGAAGAATAGCTATCTAGTCAAATGTAGAATCT GAAGGTAACCTCTTCTTCCCTCCCTGCACCACTCTTCTTCCCTCCCTGCA CCACTCTTCTTCCCTCCCTGCACCACTCTTCTTCCCTCCCTGCACCACTC TTCTTCCCTCCCTGCACCCCTCTTCTTCCCTCCCTGCACCACTCTTCTTC CCTCCCTGCACCCCTCTTCTTCCCTCCCTGCACCACTCTTCTTCCCTCCC TGCACCCCTCTTCTTCCCTCCCTGCACCACTCTTCTTCCCTCCCTGCACC CCTCTTCTTCCCTCCCTGCACCACTCTTCTTCCCTCCCTGCACCCCTCTT CTTCCCTCCCTGCACCACTCTTCTTCCCTCCCTGCACCCCTCTTCTTCCC TCCCTGCACCACTCTTCTTCCCTCCCTGCACCCCTCTTCTTCCCTCCCTG CACCACTCTTCTTCCCTCCCTGCACCCCTCTTCTTCCCTCCCTGCACCAC TCTTCTTCCCTCCCTGCACCCCTCTTCTTCCCTCCCTGCACCACTCTTCT TCCCTCCCTGCACCCCTCTTCTTCCCTCCCTGCACCACTCTTCTTCCCTC CCTGCACCCCTCTTCTTCCCTCCCTGCACCACTCTTCTTCCCTCCCTGCA CCCCTCTTCTTCCCTCCCTGCACCACTCTTCTTCCCTCCCTGCACCCCTC TTCTTCCCTCCCTGCACCACTCTTCTTCCCTCCCTGCACCCCTCTTCTTC CCTCCCTGCACCACTCTTCTTCCCTCCCTGCACCCCTCTTCTTCCCTCCC TGCACCACTCTTCTTCCCTCCCTGCACCCCTCTTCTTCCCTCCCTGCACC ACTCTTCTTCCCTCCCTGCACCACTCTTCTTCCCTCCCTGCACCACTCTT CTTCCCTCCCTGCACCACTCTTCTTCCCTCAATTGGAGCACTGAAACAAG AATTTGTAAATACGATCGTTTGATATTTTGTACCCTAACCATGACCAGAA TAACATAACCCCTTCTGTCTCATTTTTACTGATTCTCACCAATCAGATTT CTTGCTTGTGCGAGTTTCGAACAACGTGGCTCGACACTAAACAGTACGTA ACTATAGAATGAAAGCTTTTCAGAATGATGTCTTTTAGAAGGCGCACGAC GTACCGAACAAAGCGTCAATGAGTGTTTCTCGTTTTACATCTGCTGATAT TCAGCTTTACAAGAATTTGCTTTCTTCGTTACAGAACAACCTTTGTGATT ACGTTGTTTGGAATCCATGGCAACAGAATTGTTTAAAGATGGCTGACATG GATGATGAGGGTTATTTGAGCATGATTTGCGTGGAAGCCGCGCATGCGTC GAAGAGAAGTATCGTTAAAGCAGGTTCCACTTGGAACGCATCTCATGTTT TATCGAGTAGTCAGTAAATTTATAGATCTGTGAATACCTTGCACAGCACA TCCATCTCGCACGATTTTGTGTTTTAAATCGTACAAGTAAGGGTTATGTT GTAGTACACTTTTTCGTTCAAAACATCTCACTCTATCCGATAGTCTTAat cattttgtcaaatttgacaACCTTCCATTTCTAGTCACTTTTTACTCTCA CTGCAGTTTTCACTGTAACGTCAGTATTCTGGCCATAAAAAGTTTTGCTG GACCTGCATTGAGTTAGCCATAAAGAATTCCCCTTGGTATGACCGGTTCT TACTAAGGAATAGCCTCAATTACATTCTTCAAATCCTTTTATTTAAACGT ATAGACGTTAGATGAACAATGGAACGCCCTTTGACAGTTGGGGAAATCTG TGTGATGGTTAAATCGTTTTGAGAGCTGATTGTTTTCTTTCATTATCCTg ttttttacaatttatttattttgattgcACTTTTCTGCATTTATTTATTT GCACTGATACACGAtcacttttgaatcactttttttttgggagatctttt ttaattcgaaaataattttcttgtaTAGTATTTTTGGTATAGATGATTGA TATGTTTTTtacgtcattttgaaaatataaaggAATAAAATAAGATAAAT C
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065252TCONS_00065252Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00065252-proteinTCONS_00065252-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_435supercontigscaffold_435:52240..59590 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.89 4.96 12.59 13.39 3.73 2.8 8.78 9.72 14.03 12.53 10.17 11.57 9.93 7.79 5.01 5.09 9.45 7.49 7.14 9.78 5.91 6.3 6.18 5.3 12.26 12.48 4.59 4.45 3.99 3.16