XLOC_041381 (gene) - C. hemisphaerica

Overview
NameXLOC_041381
Unique NameXLOC_041381
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_450:141358..152664+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041381 ID=XLOC_041381|Name=XLOC_041381|organism=Clytia hemisphaerica|type=gene|length=11307bp|location=Sequence derived from alignment at scaffold_450:141358..152664+ (Clytia hemisphaerica)
CAAGGAAGTGACTGATAATAAATTTCTTACTTTTATTAGGATTTTCTaac aaaggtaaaaaaaaaaatacaatacaatacaatacaatatgCAAGGAGAA GATGAAGCAAGATTTCTGAAAaggtaaatttcattttttgaaacataatt ggaaaaacatttttgtttatttcatgattttattttttccctcAGACATC CAAGTTCCTGTTTTCCATCCTATTATCCTAAGAGACTTTAAGGAAGGAGA GAATTCTACTTGAGTTTTTTGATATCACCATAACCTCATTTGcaaaatat aaactttttctagaaattattaagaaaaatttaacttcaaGCTTAAAAGC TGTGGAAAAGATGATTGAGAAATGGAACTTGGAACATTAAGCTATATTGT CCATATTATTGCATTTATacaactttttctttcttttgtaccTACCCCGC TGGAGGTACTATATTGTCCGTTCGTTTGTTcattattagctttcctcatt attggctcattagttttttctgattttttgcacaaagatgcataactata aaccctcgcatgtgacgaagcccgattttcgaaaataaaattttttgggc aaatttgggccaaaaaacggctaaaaaacaggttttttggactttttgaa aaattggatcataaTTCTTTTCTGATTTCTTGCATGAAAgtatagggtac catcataggtaaaaaatggcttaagcagatttttgcaaaaaaattttgta ggctcaaaaaacgcatgtttatctataagaataactattaataagcatac atcaatgttcttagtcaaattactcaattattttatgagatagatgtttt ttttttgcttatgagggcttacttttaaagaatatgtgtgtttagacatg aaattttggttgcttggcgtgtttttatagaaaaactggccaaatttgtt atttttttataagcacattatcaattacttaggtattagcttttctcgag attggctctttcattctttatgattttttgcacaaagatgcataactata aatcctcgaatgtgacggagcccgattttcgaaaaaaaaatttggggaca aatttgggccaaaaaacagctaaaaaacgggtttttcggactttgtgaaa tattggatcattgtttttttctgattttttacatgaaagtaggtaaaaga tggctcaagcaaatttttgtaaaaaaagaatttttcagctcaaaaaatgc atctttatatatctataaaaatcacttttaataagcatacatcaatgctc ttaaaattactgaattttttttctcacaaagtcttgaatatgaaagaata tttcaagagcatgaaattttcgtttctaaacgttttttataagaaacaaa cgactaattttaatagatcgttactatttgtgttctgaatgattgtttaa tggtcacgctcacgtagatatcaactATATATGtattaaatgcataacca ggtaggtccataaaagtatcacttatTCAAACTATTTGTTATGTATTTCT ATTGCTTTTTTCTATATACCTTTTTATCGTTAGGAAAGTAAAAGGGGGCA CCATAGATGTTCACCCTAACCAGAATGCACTGGTGGTCAATTATGAACTG GAAGCCGTCATTTTGGGGGAGATGGGTGAACCCATGATGGGGGAAAGAAA AGAATGCCAAAAAGTGTAAGTttcttttgtaataaaagtaTACGAAATAT TGGTTGTCTATACCTTATGCCTTATCGTATTTCGAACTTAGCTCACCTTG TTTTTCAACTTTGTACTATTCAATACTTATATTATCCGATATTATTGAAA GCttccgtcaacaagaaactttccTAAACAACACTCTACGATTCGATATG CTCCCTTATTTGGTGATattcaattccccttgaaaatcgaattagagagc gtcataAAATATAAGCCTATATGTAACAAATTTTTCATACTCGTATACTT TCAGTATACGATTGAAATCATTAAATGGTGGCACTGACGTTAGTGTGTTG GCAAAGGAGGTGGTGGACAAGTGCAGTCTCATACATCCATCACGAATACC AGAAGTCGAACAATTGTTATACTATTTGCAACAAAGGAAAGGAGGTCCTA AAGATGCTGGGCTAGGTACGAAAAATGTCAGTTGTTACTTCATTGGAAAT TATGCAAATTGAACTCTTCTTTTAAAAGCTTATATCCAATAATTCATCCC AGTTAAATTCAAAGATTGGGTATTGggtgaattttttaatttcttgactG GAAACACCCCCCTGACGATTTCCCCTGGACAATGATTAACACCTTGGGAC AATTGCCGCCGAGACGATTTTGATCACTGAGCAAAATTCCAAGGTCGTTA TGCTTTATAAATGAATTTTTATACTAACCTTCATAATTGAATcgtattta ttttttctgaattGGTTCTACCTTAATTGACAGAAAATATTTGCTGGGGT TGACAACCATTATACCTGTAAGCtcattgaaacaaaagaaatgttGTTTA TCCAAAATACatcagttttctttttttatcaatgcagagaagaagaaaaa gaaagagatCGATCCATTTGATAGCAACGAGTTTGATGAAAGTGCAAACC TTAATGATGTTGAGGAGTATATGGAACTCCTTTACGACGATACTACCAGT AAGATCAAAGGATCATCCATGATATTACAGGTGGCACGAAATCCTGATAA TCTTACTGAGTTAGCGCAAAATGgtaattgtttttcattttttactggct ttgatgattttttattattgtgcgcttttgtttgaaaagctttcctgaag aaaaaagttcttTCTTCTTAAATGACACCCTAATAGTGCTATGTCGTTTT CATAACTAGAGGGGATAggagaatttttccaagaattAAGGGTGGGGACT TGCAACCTTAAAATTTCTTTCATCACTAAAGCAAATATCTACAATAAGTG TATAAGGGAAGAATCTGAAAAGTAGATGCTATTTCCGGTACTTGTAATTA ATCTTTACGAGTTTGTTCGTTTGATTTGTTATTCAATTGACGTTGTGCTA AAATTGCTTAAGGAGCTTGTATCATAATGTTGTCATACTGTGATACCAGG TATACCCGATACAacattcttcattttcaatttagAAACCGTTCTCAGTG CATTGTCACGTGTTCTTCGTGAAGAATGGAAATCAAGTACCGAACTTACC ACAAACATCATCTACACCTTTTTTTGTTTCTCCAGTTTCTCAGATTTCCA TAGCGTCATATCACATCACAAAGTTGGTGCTATGTGTTTGCAAATCTTAG AACAAGAGACTAAGAAACATCAACTCTGGCTTGAAGAGTTGGAAAAGAAA CAACAACAAGCTGAAAAGAAACCAGAGATgaaaaaagaatatgaaaaaag ttataaaaagtatcagaaccTGTTGAAAAAGCAAGACCATTTGATGCGAG TTGGTGTTTACCTACTGTTAAATTTGGCTGAAGATAGTAAAGTTGAAATC AAGATGAAGAATAAGAGCATTATAGATTTATTGGTTAAAATGATGAAACG TCAAAACATGGAGCTGTTGATACTGGTTGTGTCCTTCTTAAAGAAACTGA GCATCTTCAAAGACAACAAGGACCAAATGAAAGAAATGGAGGTCATGGAA AAAGCTGCACAATTGATTCCTGCTCAAAATGATGATTTATTGAATATCGC TTTGAGGTTGATTTTGAATCTAACCTTTGATACTGAGATGAGAGATAAAG CTGTTAAATGTGGTTTGATTCCCAAACTGGTGGATTTGATATCTCTTGAG CATCACAGTGTTGTGGTGACATGTATCTTGTATCATATCAGCATGGATGA TAAATACAGATCGTATTTCAGCTACACGGATTGTATACCGTTGGTAAGAT ATTTCAaagtgttgttgtttttttcgaaCAATTTTCATTAATTCTTGATC TGTGTATGAAACTTGTTCCGTATCATCACAAATTTAATTTGAGAGAAATT TGTTATCGGGTATAAATTTTTTCAGACTAAAATATTCTTTAGCTGTTTTT TAACTAATGTTTGTTAatgcttggggacacgagaaatttttttcttgttt gtgcaatgcaacatgctccatctcaccagcctgaaacgctttctcgtgac tccaccccatttttcttttaataacatttgtgcttctctTACTTTAgtcc ctgggacaaaatcaGTGTgccttttgggtatttccctcactttttgtccc acgaaacaaaacaaaacacgcACTTTTTTGCTTATGTTGgttgataaaat caaaattctagtatcaaattttcttattcgAAGTAATAATCTAGCATGCT GGAAGGAGCAGATTTTAGTCGTCGTTTCCATTTGTTTATACTTAGGCTGA TATCATGCTGTAACAAATAGCATATCATCATATAACACAGATTACAAACT TAGGAGAACATTGCCTGATTTTGTTTCTTTAAGATTTTacgacatttttt ttttctatacaATGTAGGTTATGAAAATGATCCTGGAGAATCCCACAGAT CGTGTTGAAATTGAACTCATCGCACTTGCCATTAACCTAGCAGCCAATAG ACGTAACGCTCAATTGATATGCGAAGGAAACGGGCTCAGATTGTTAATGA GACGAGCCATCAAGTTTAAAGATCCATTGTTGATGAAAATGTTGAGAAAC ATTTCACAACATGATGGGCCAACCAAAAGTGAATTTGTGGTAGGTAAAAA TAAAAGCTAATCGAGCTTCTATGAGATGACGTACTTGTCTGTTAACATAC CCAACATCTATGGAGATTTCAAAAATCATAGCTGTAAAGGGTTTGTTGTA CGTGAGGTGACTGGGGATTGCATAGCATTCTAGGTCATTCTATGGAAAAT TTGCTGTGACCACctctgatattataccatatatATGCTTACTAGGTCAG GTTATCGTTTGCCGTGGCTAGATTATCTAAAAACATTTCACTTTAAGAGA TAGTGAAAGAAAATCGACTCATTTGAGGGCTTGAGCCTTAGAAACCTGGT TGTTTAAAATACATTGTGTAGTCAGTTCTAAGAAAAGTGCTGATGTATCA TTATTCTCAATGCTTGTGAAGCATCTATTAATTCTAAGAAAAATCTTAGC CTAGCTGCTTGTTACTGATAAAGCTTAGTGAAGATGTCAAGTTCTCCCCA AAAAGTTCTTAGTAAGTGAGACCAGTCGGTGGGCCAACTAAAATTCGAGT AAACTTGGGAGgcaattttaggaaattttgattttggcgccccttcgcga gcacaaaattttttttcgtatttTCTCTTATTTTGACCGAAAACTGCTAT ATCTAAggtgcaaaagagaaaaatgGCGCTGAAATTAGTAATCGGAAGCG TCTTTTTGCGCCCTTTGTATTTCAGCGCCCCCAAAAAAATCGGCcgctgc caccacgctactcaTTGAGACATATCAATTCATTTTGTCAGATGGGCACG GATTTAGCTCTCCTGTAGCGAGATCGGGCTTCATGACTATTTCACGTATT CAATAGATAAATTTTCAGGTAGAGCATTTATGTGAGGAATGAGGGAGCGT actatgaaaattttgattgaataTTGAATAGTGGATTGAatataaaaatc agaaaataaaacttcatgtttttcttttctttgtagaATTACATCTCTGA CTTGGCAAATATCATCAAGAATTTCCAAGAAGAAGAGTTTGTTGTGGAAT GTGTTGGTATCCTTGGCAACTTGAACATCCCTGAACTTGAATATGCCATG ATGTTAAAAGAATACGATCTCTTGAATTTTATCAAATCCAAAATCGTACC AGGTAAGTCACAAGTGTGAGAAATTTGACAatcttttcgtttttttgttg ttgttttttttgctctagtCTCTAAGGTAGAGAAAAGTCTAGCAAACTAG TTGGCATAGCTCACATTTTGTTACAAGGTTTTTGAAGGATATTAATGGGA TTGAAAGTAGTACGTTGTTGATAAAAAAAGTATTGTGGTTAATTCTAAGG GTTTTTGAATTTGCACTAGATCATCCTTGCATTTATgtttttcaggaact ttgaactTCGTTGATTTCGGAAATCTCGATTTTTTAGACCAAAGTAACTG CCCTCCAAAGCATTTTTAAATTAGCTATGAGTAGTTCCATAACGCGGTTT TACTTCCTATTACttgatatctttttattttcactatttctAACTGTTTC TTTTGTTATAGGAGTGACAGAGGATGACTTGGTGCTTGAAGTGATCATTA TGACAGGTACTATTGCCAGTGATGAAGGATGTGCATCGTTGCTTGCTGAA TCTGGAATCATTCACGACCTCATCGAACTTTTAAAAGGTTAGCATCCATT TTTTTAGCATCCACTACAAACGATCTATCCAATCCAGTTTATGAATTTGG GTTGAAAGCTTTCTGAGAAGTAGCCTATACTAGCCGTTTTTTTATGCAAA GAAACGGAGCGAAAAATCCTGGTTCTTGGTAAGGTTCCCACTATCTGAAA AGGGAGCTTTAGTGTCCACTGCGTTCGTAAAACTTATGTTGTTTACTACA ATAACATAACAATTTTCGTTTCTTTTGCCATCTTTTGCAGAGAAACAAGT GGACGATGAATTGGTTTTACAAATTGTTTACGTTTTTTATCAAATGGTCT TCCATCAAGCTACACGAAATGTTATCGTCAAAGAAACTCGTAtcctttct tatttttcaagTATTAATGTCCTTGCCCTAAGGAGATTAGATTCGTATGT GTCATAAATAATTTCCTTGAAAATGCTAAAAGTCTAGatattagtctagc aagctagacgactaattcagacacagtagaaataaagcaaaaagtaaaga CAATGGAATTATTATCTCCTTAATATTTGAACTCCAAATACACTTGAACA GAGGCACCAGCGTATTTGATTGATCTGATGCATGATAAAAACGAAGAAGT ACGAAAAGTTTGCGACAATACGCTCGATATTATCTCTGTAAGTTTCTGAC ATTATGTTTGATATTATCTCCGTAAGGTTGTGACAATGAGCTTGATATTA TCTTTCTAAATTTGTGACAATGAGCTTGATATTATCTTTCTAAGTTTGTG ACAATGAGCTTGATATTATCTTTCTAAGTTTGTGACAATGAGCTTGATAT TATCTTTCTAAATTTGTGACAATGCGCTTGATATTATCTCCGTAAGTTTG TGACAATGAGCTTGATATTATCTTTCTAAATTTGTGACGATACGCTCGAT ATTATCTCTGTAAGTTTGTGACAATGCACTTGATATTATCTCCGTAAGTT TGAGACAATGCGCTTGATATTATCTTTCTAAATTTATGACGATACGCTCG ATATTATCTCTGTAAGTTTGTGACAATGCGCTTGATATCATCTCTGCAAG TTTGTGACAATGCGCTCGATATTATCTCCGTAAGTTTGCAACAATGCGCT TGATATTTTCTATGATATTAGTATTTCGGCAGCTTccgaaaaatctgaaa atattctttaaagaGGCTACCAAGAAAGGGGTACCTTTTGAAAATATATC GATCAAAAACCATAATTTACTATAGATACTATGCACTTTTATTGCTTTAA GAATTTCtcatgattttcatttttaggagTGTGACAGCGATTGGTGTTCA CGCATCACGCTTGAGAAATTCCGTTGGCACAATTCACAGTGGTTACAAAT GGTGGAGGGAACGGACAACCCTGAAGAACGGGACATGCCNCACAATTCAC AGTGGTTACAAATGGTGGAGGGAACGGAGAACCCTGAAGAAAGGGACATG CCCGAACAATATTtcgatgaagaaaatccatacGGTGGTGACTTGTTCTC AAGAACTGATCTCTTTTACGGTAAGAAAGACATGATTCAGTACTCAAAAT CTGCTAAACCTGAATGAACAGGCAGATCGAAGTGTTCGTGAAGTTCTTGT TATGGCAGAGGTCTGTCTTTGTGGTATAATTGTTACATGGCTAGTTCTAG ATAATTGTTTTCGTGAGAAAATAACCCTAGctaaatgggctattccagaa atagtctgtaccccttatgttgaggaggtgGTCCAGGGTGCTCTGGAAAA TAAGAAATCCAGGGTGTTCaggttttttgaatgataaaatccagggtggt cagtaaaattagATTGAAAATCCAGGGGTGGTTAGTATAAcgaggtcaaa aatccagggtgatccaaagaaatgagagaaaaaaatccaagggggtcctg aaaaattggaaaaaaatccagggggtcaccttcttaaaaaaagatctcat caacatagggggtacaaaatttttctggaatagcccaataagCTTAAGGT AGTTTTTTTTGCGATAAGAATCAGGCTTGTTTTGTAAGCAAAAGCATTGA GAGTGAGAGTTGACGCTTTCTAATTAGACGCTTTAGAATTCTACAAGTTC CGATTTTTCTACCAAATAAAAACTACCGTCTGGACGCTCTACCATTCGCC GTTCTTTTAAAAGCTgccattttttgataaatttcaaagTTCTATTTTCC TGCAACTTGTATTAAAACAACTCAAAAAAAGAAATACGAATTAGTGAATA TCCACTTTAAATTCCTACCCTACAGTACTTTATCGAGGAAAATATTCGAA TTTAAACCAGCTATTACTTaatgcaaatcgaacgttctCTTACATAATGA CGGAAGTTTCTGAAAACCTATAAATCtgagctttttctttttctttcacc ACAGGGAACCCAGACGAAGCCTTTGAGAACGGAGAGGATGGTCCAGGAGG TTATGGAGGTTACAATACTGCAGGTGGTCCTATTGATGACCCAAATAATT ACCCTAGTGAATATGTCCGTGGTGTGGTAAGTTTTCCATCTTATTTTATC TTTCTATTTATAAGCGAGTTTATTTCTTTGCACTTTTGAGAACGGCGGTG TGACTGAAGGAATTTGGAATAACCTGCATTTTGACCGGTCCGAGGGCGGT CCTCAGTCAATCAGGATTTAGTCAAATCAGAAGCGAACCGTCTCCGCCAC AgagaaaatacacaaacagTAACTGGCCCCCAGAATGCAGGTCAAATTTG AAAACTTCTTCAGAATTAGtgatttacaaaaaaatctatCTAAATGTTTG TAATTCATCTTGGTCATCTCAAAAATCTTTCCCCCAAATGGTTTTTTCCC AAAACTATAATTCTAAGTATATTTTCTGTGTGTGACGTCACAAAATTCTA GTGGCTCCCAGAATGCtggtttttaatgattttcaataGTCTACTTAACG TAGATTCATAAAATTTTCAGcctcgatttaaaaaaaagttttcagctCAA AATGATCAActtctaatttatttttaataaggTACTAATATTGTCAAAAT GCAGATTTTCTGCCCTCAAAATGCGGAttacaagattttttttcataaac tcNGAATGCTGGTTTTTAATGATTTCCAATAGTCTACTTAAcgtagattt tttttcataaactcgCTATTCTACAAAGGCCATTTCAGGAAACAATGAAG TGCGACAGACGTAGAATTATAAAGTTTTGCTAGCtatctttaaaatgaaa attctttacTTTAGTTGGGATGGGTTTTTCAGGAAAATTAGTTAAAATTT GGGACAGACTTGAGACTTCTAAGATGGTCTTATTTGGCTGAAAGTTTTCA CAATCGTTCCTTGGGTTAACATCCCGAGTCTCACATTTTTGCTACAATAT GGTCTTCGAATATTTGGAAAAATAGTGGAGTTGAGCCCAGGGCGGTGCGT ACGTCGACTATAAAAATATTCCATTTAGCCCCATTTTTGACAGTATGAAT GTTCACTTGTTACTTGTAATACTTATTTTGTATCTTTAGATGTCTACTGA CCCTTACGACCGCCCCATCACAGCAAACGGTCAGCGCAGTAACATGTCGT TGGATGCTTCACAACAACGCTCTGCTGCAGgttatttcaacaattcttaC GGAAGCTCGCAAGATGATGACGTAGATATCGATTATCCGAATTACGGACA GCAACAGTACGTCGACGATTACGCTTACGGGCGTGATGCGTCAATGTATG GGCGTAATCCAGGTGGATATTAAAAGAGATTTTCTGTGACCTACAAGCAC CCAAATTCATAATATATGTGACATACTGTTGGTGGTGTATTCGTTTGCAA GGAATTGCAGAAGACTCTATGGTGAACGCCCTACTTACCTTTTCACATGC TTCATTGTGGGGATTTGGGTGAATAGGGTTTGATAAGCGGGGAGTGACGA AGGAAGGATGTTCAAAATGCTTTTGTCCTGATTTTGTCAGGAAGGTGAAG CATATTGCCAGAAAGTATTTAAAAGATACTTTGAGGGATAcctttttaaa ttcaattaaAGTCCCAGAAAGTCCCAATCTCGactcaaaaaaatcattta gtTCTTTCTTGAGACTAGCCCACACACAGTTTTTTCAAGTCTGAGAAAGA CCGCTATATTTTCAACTTAACCTTAATTGGATGGGCTTTTGGGATTGAGG ATCCCCTGTTTGCTTCAATCCTCAGGACCGGAGGAGAATGATTAAACTTT TGGGGAAATTGCTGAAGAGTGTAAATAGTAATGAATAGAAAGTGTTTTAT CCTCAGAAAACTAATATTATCACTCGACGATCTCCCAATAAGAAGAATTC GAATAACTGAGGGTGATTTAGCCCATTATGGGCCCGATGGGGAATAGAAA TcgcttcgaataactgaaagtgTGAATAACCGAGAGTGTTTTGTCTAAGT TGGGTCAGTAGATGCAAGGCGAGCGTCGTAAGTCCAGGTTCGAATAACTG GGAGTATACTGTAATCACAAACATTTTTAATTGTACAAAAAACGTATATA TTGAATTTTtatagaaaatcaaaagaataaaaacacacaaattgtaaatt ttatgTTGATAATTTTTAGGAATAATtgttttcatgttattttaaaaaaa tttatagtCTCTCTATTCTTTGCTTTGAAATGCTAAATAAACGATAACCC AAATAtcttattttgacattttcaagatCTAGCTCTGCAGTTAGTTTTCT TATGTCTAATAGTCTTTTCATTAATTATTTCGAGTGCAAAaattgcctcg ttttgaaaccttTTTCGAGGTTcttacacaggaaaaaatcttaaaatccc aGGCATG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066102TCONS_00066102Clytia hemisphaericatranscript
TCONS_00066103TCONS_00066103Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066102-proteinTCONS_00066102-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_450supercontigscaffold_450:141358..152664 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
KIFAP3PREDICTED: kinesin-associated protein 3 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.22 7.81 8.65 8.5 26.26 18.92 15.22 15.78 12.59 15.71 10.33 9.14 6.5 5.79 4.81 5.48 6.28 5.62 4.63 5.4 6.03 6.72 8.69 8.7 27.98 24.37 7.99 6.25 6.05 6.86