XLOC_041384 (gene) - C. hemisphaerica

Overview
NameXLOC_041384
Unique NameXLOC_041384
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_450:57560..63820-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041384 ID=XLOC_041384|Name=XLOC_041384|organism=Clytia hemisphaerica|type=gene|length=6261bp|location=Sequence derived from alignment at scaffold_450:57560..63820- (Clytia hemisphaerica)
TTTAGAGGACCGAGGAACAATTCCTGTATTTTTGAACAGATTGAAACGAG
AAACAGTACTGTAGTATATTTTGGGTATAAGGCATTTTGAAGAATGGAAA
GAGAAGGTTAGTTGATTACAACTCTTGCTTCACTGATAAATTGGTGGTCA
TTATCTGGTAATTTTTATTAAACCCCTGTCTTACTGACTTGATCACTATC
TTACTGACTTGACGGTGGTCAGTTCATTACACCTCTGTCTCAGTACCCCG
GTGGCAATGTCTTTAGTACACCTCTACATCTAGACTATGCTATAGTCTAA
GTATAGTCTAAGACCAATCAAAGCCGAAGAAAATTTGCTGGAAGGAGTTT
ACAGTAGTTACAGTAGGTAGAGTTTTCCAGTGTTCTTCGAAAGGCGTAGT
AGTGTAGTGGTTATCAACCTTGATTTCCGTCTGGGAGGTCAGGGTTCGAT
TCTCACTCGATGCTATAATTCACTTGGCAAGTGAATGTACCTTCGCCCGG
GTCGATCCATGCCTTCTGAGGGGAACTGGGTACCATCACTCTGATAAAAG
AGTATGGAGGAGTTTGTCAGGCATTGCACGTGGTGTGGTGACGATACTCA
CAGGTTCAAAACCTGCGAAGATGTATGTACTCCCGTGTAGTTCAAATATC
ATCGTCTAACACCAATAACTTTGTCGCGTCGCGCAGGGTTAGCAGTGTCT
GGTAAGCGTGGTAATTTCCCTACCCTAGGGTAGGTATCCAGGGATAGGGC
CTATTCCGGATGATTAGGAGGGTTCAATTCTCTTTCTCTCTTCACTTCGA
AACAGCTGCTTTTTTTCCGTATACCACCATAACGATCATAAACTCTGCGC
GTATACTATTTTCACGCCTTTACTATCACTGTAAACGGACGATAACATTG
TCTACTCGATATCCTGTCTCAGTGAAGTGACCAATTCGGATTTTAGCAGC
CAATCCCAATCGCGGAAGACGCACAATCAGTCAATAAAAACAAGCTTACA
CTGTCTGCACCCCAAAAGTCGATGAATTATGTTTTCTTTCTGACGCCTCA
AATAATCATTGGAAATACAAAAATGAGCCTAATAACACTTATTTGTCACC
TAAAGATTCTTTCCCAATGCATAATTCCANNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNCAATACTCTTTATTTGTTGAACTAGTCTTTAATCGGACTATATT
GAAATCGATACTATTAATCGAACGAATCCGATTGTCAAACTGTTCGATTA
AAGTGACCTATTTTAATAACGGCGATGCAATAGTATGACTTGCTGATCTG
GAGCAACCTCGTTCTCTGCGTATTATCAGCTTATTGATGCTTACTGATAA
AGCTAGATGTTCTCTGACGTCTATCAGTAACGTAAATAAAGCCTGGGATA
CACGGAGAACGAGGTTGGATATGCAGTTTATTCAACGTGCCCTGTCTGTA
AGAATAATTTTTAACGTTTTCTTCTCTTAAATAGAAACCCGTTCGTATAG
TATCGAAAAACCACGTCACGCCAGCCTTCTAGATCGCAACAACAATATAC
AACACCACGACAAATCATCCGATATCTCTCACAACACAAGCGATAATGAA
AACGACAGAGTCGTACGTCAGTGGTTACAAGAAACCGTAACCGTCGTTAA
ACCTTTATCCGACAAAGACGACAGGAATGAAACGTTATGTCGGGTATGTG
GCGATATATCGTCTGGTCGACACTACGGGCAATACACTTGTGACGGATGT
TCCGGATTTTTCATGCGGTCAGTCCGTAAGAATATGACGTACCGTTGTAA
AGGGAATAAAAGTTGTATCGTAGATAAGAAAAGAAGGAATCAATGTCAAG
CATGTCGCTTCGAGAAATGTTTGGAAGTGAAAATGAATAGATACGGTAGG
AGATTTTCCCATTCTACGGTTACTCCTTTTATAAAGCTCCAACTCAAGGT
GCATTGAAGAAGATGAAAGTATTTGATACCTACATACTCAATCCTTAGAA
ACTTAACCTAAAGAAGGTTCTCAATACACATTTCCAACCGTAGTCACGCG
GTCAGGCGTGTGCCACTTAATTATTTAATCATCCCCCTAAACTTGATCCA
ATCCTTTTTTGACACCTTTTTCTATTGTCTATAGGTGCGAATAAAAGACT
GGGACGGTTTTAGGGTGGTAAAACGGACAAAGAAAAGCCCACGCAGCAGT
TGGCGGCTACGGTTGAAAAGGTGTATTACGTCTGCAATTTTAATTTAATG
CACTTGAAAAATACAGTTGACCCTTTCTTATTCGATCTCCAAGGGACCAA
GAACTTTTTCGAATTAGAGGAAGATTCAAATTATGAACGAATTTAACAAT
ACTTTAAAGCTGAGGGGACAATTTTTTCAGCTCGAATTATACAATAGAAT
TCGAAATATAGAGGTTCGAGACTACTAAATGTACATCTTTTATTATTCGT
TGAAAATTGAAAGTTATTCAATTATTTTGCAATGAACTTATAGCGGTGCA
GCAAGAGCGNCAATACTCTTTATTTGTTGAACTAGTCTTTAATCGGACTA
TATTGAAATCGATACTATTAATCGAACGAATCCGATTGTCAAACTGTTCG
ATTAAAGTGACCTATTTTAATAACGGCGATGCAATAGTATGACTTGCTGA
TCTGGAGCAACCTCGTTCTCTGCGTATTATCAGCTTATTGATGCTTACTG
ATAAAGCTAGATGTTCTCTGACGTCTATCAGTAACGTAAATAAAGCCTGG
GATACACGGAGAACGAGGTTGGATATGCAGTTTATTCAACGTGCCCTGTC
TGTAAGAATAATTTTTAACGTTTTCTTCTCTTAAATAGAAACCCGTTCGT
ATAGTATCGAAAAACCACGTCACGCCAGCCTTCTAGATCGCAACAACAAT
ATACAACACCACGACAAATCATCCGATATCTCTCACAACACAAGCGATAA
TGAAAACGACAGAGTCGTACGTCAGTGGTTACAAGAAACCGTAACCGTCG
TTAAACCTTTATCCGACAAAGACGACAGGAATGAAACGTTATGTCGGGTA
TGTGGCGATATATCGTCTGGTCGACACTACGGGCAATACACTTGTGACGG
ATGTTCCGGATTTTTCATGCGGTCAGTCCGTAAGAATATGACGTACCGTT
GTAAAGGGAATAAAAGTTGTATCGTAGATAAGAAAAGAAGGAATCAATGT
CAAGCATGTCGATTCGAGAAATGTTTGGAAGTGAAAATGAATAGATACGG
TAGGAGATTTTCCCATTCTACGGTTACTCCTTTTATAAAGCTCCAACTCA
AGGTGCATTGAAGAAGATGAAAGTATTTGATACCTACATACTCAATCCTT
AGAAACTTAACCTAAAGAAGGTTCTCAATACACATTTCCAACCGTAGTCA
CGCGGTCAGGCGTGTGCCACTTAATTATTTAATCATCCCCCTAAACTTTA
TCCAATCCTTTTTTGACACCTTTTTCTATTGTCTATAGGTGCGAATAAAA
GACTGGGACGGTTTTAGGGTGGTAAAACGGACAAAGAAAAGCCCACGCAG
CAGTTGGCGGCTACGGTTGAAAAGGTGTATTACGTCTGCAATTTTAATTT
AATGCACTTGAAAAATACAGTTGACCCTTTCTTATTCGATCTCCAAGGGA
CCAAGAACTTTTTCGAATTAGAGGAAGATTCAAATTATGAACGAATTTAA
CAATACTTTAAAGCTGAGGGGACAATTTTTTCAGCTCGAATTATACAATA
GAATTCGAAATATAGAGGTTCGAGACTACTAAATGTACATCTTTTATTAT
TCGTTGAAAATTGAAAGTTATTCAATTATTTTGCAATGAACTTATAGCGG
TGCAGCAAGAGCGACAGCCGAACAATCACTTCAGTATGCAGCATCATTCA
TTCCATGGGCTACCACCCTACCTCTATCCAAGGTCAGTTGGTTACTACCC
TCCACCACCCCCTCCTCCACGAATTGGCCTGACCCGGATAGGCGGGAGCT
CACTTCCCACCATGCATGATATACGGGAACGACATCGAGAATTCAGGATC
AATTACCAACACGCATCTACTTCTTCTTCCTTGAGACAATCACCTGGATG
TGTCTCACCCCTACCTACCACTACCAAGATACAGACTCCTGTTAGTCCTC
CACCAAGGCTCATAGAGGCCACGAAAATTAAAACAGAGGATGCAGTACCA
GTTCAAGCACCAGAAAAGCTAGAAGATATAGCGGCTCGGTTATTATATCA
TACAATCAAATGGGCTCGGTCAGTACCTGCCTTCACAGAACTCTCCATTA
GTGACCAAATCAGGCTGTTAGAAAACTCTTGGTCAGACATTTTCGTTCTA
TTCGCATTCCAATGGAAACTGCTTATTGATTCTGGTGAAATTACAAAATC
CATTGAAGAGAGGCTTAAAGATGATGAAAATGGTCACATTCGAGATGATT
TATCAGCAGAGTTGAAACACTTGCAAGAGATGGCTGGCAAATTCCATTCA
TTTCATGTTTCAGAAGACGAATTCATTTACTTGAAATCTGTGGTATTGTT
TAAACCAGGTAAAAAAAAAGGAAAGCTTTAATTTACAAAAAAAAGAACCA
CTAAACTTTTAACTGAGCAGCAATTGTTCTTACTTTTTCGAGAGATTCAA
AATTAACCAAATTCAGTGTCGATATTTTCTTTCTAGGTTTTGATCAAAAT
CGAACTGTATGATTGCAGTCTGCAGTTAGTAGTCTGTTTCCTTGCATATC
TGACGTTTTAGTAGTTTGTTTATTTGCACCCTTTCATATCTGACGGTCAA
TAGTCAGGCAATGGGATTACAAGAAATAATATACTGATAAACCCTTGCTA
TTCAAAAAAGGGATCGAGTTAACCAGAATCAAATCACGCTAAATGTAATT
TGACGTCAACCAACCTTGTGAAACTGAAAGAAGAAAATCCTCTTGTGATC
ATAGTCCGTATAAAAAACTCTGGTCTGGAAGCGTATTGTTTTAACTTTTT
TCCTCTTGGGATTGGTTTAAGATTTAATCACATGATCAAAAAGCGAGCAA
AAAAACTAATTTCTCAAACGCAAGTTCAAGTAAGAAACAATGGAAAGAAA
CAAAAGGCTTCCAGACCGGGGTTTTTTATCCGAACTATGTTGTGATGTCA
GGGCTTCTATGTGAATATATTTCAACTCCCTTCAATGAACACATGCTTTC
ATTTTTAGAGGTACCAGGTCTGTTGGACCCACGACACATTGAGAGGTGTC
AAGACCGTGCTCAAATCATGCTCCGTGACCACGTGGTAGCCTGTACACCA
GAACAACCTGCAAGATTTGGTAAATTACTTCTATTATTACCAGAGGTGAA
ACGAATCACACCGAAGACCATTGAAGAAATATTATACCAACAGAATCTAG
GGACTTTCTCATTTGACACGCTCCTGGCTGATCTATTCAAACCATAATTC
ATATAATTTATCTATTGGTAGCAGACTTGATGATCAAAAAGTGTAAATAT
TGTAATTAGTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066109TCONS_00066109Clytia hemisphaericatranscript
TCONS_00066108TCONS_00066108Clytia hemisphaericatranscript
TCONS_00066107TCONS_00066107Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066109-proteinTCONS_00066109-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_450supercontigscaffold_450:57560..63820 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.03	0.08	0.09	0.12	0	0	0.07	0	0.02	0.03	0	0	0.98	0.74	0	0.03	3.26	2.86	1.45	2.27	2.44	2.09	0.52	0.79	2	1.85	0	0	0.06	0