XLOC_041407 (gene) - C. hemisphaerica

Overview
NameXLOC_041407
Unique NameXLOC_041407
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_451:458136..461335+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041407 ID=XLOC_041407|Name=XLOC_041407|organism=Clytia hemisphaerica|type=gene|length=3200bp|location=Sequence derived from alignment at scaffold_451:458136..461335+ (Clytia hemisphaerica)
aataaaataaatttgaaaatcaaggtGTTTTATATGACGGAacaagagaa agaaaaaatgaaaccgAAAGTTCATACTGAGTTGGCATTACGTAATGAAT TGAATGTAGGGAATTTTGGATTCCATTTCACCGTGATCGgagaatcaaaa caaagtttcgTCCAATCAAACGTAAGTTGCATTCTTCCAAATTGCCACAG GACGTTTTTTCAACGTACATCTAACGTCATATTGAATTAGGTTTTGAATG TTAGTTATAGCGGGTTGTTTTAAGCAAAATCTCTCAAatgggtttttcca gaaaaaagatTAATATGGGGGAGGAGGATATAAcacttttggaaatttac ccccagacagcaggtctaaccccccggACTAGCATCAGTTGACTctctgg acattcaaaattaacCCTAAAACAGAGCAAAAATaccccccaaacagagc aagtttaccccctggacaaggcaaattttgtagatttttcaataCCCCCG TACACTATATCCTCTacccccccccatgtacggacatttccTGGAAGTGC CCACTCCTACAAGAAAGCACATCCCTTTTAAtgtagctggcacacaacgt tgtttcaacgttcatctatcgtaatatggacgttgtgaacattagatagt CGTTGAAACACCGCTTCGCATTTTGACACCAATTCCTTTATGTAGGGAAT TCGTAATCGAAGGAAAGTTTTTAATTTCTTCTCCATATGTAGAGACCAGT GACTCCCCAGACTCTATCATCATTCAAGCCTACCAATATTCTATTCATCA ATTAGATCAAATGCTGCGGAGCCACGTTCATCATGGTTTATCGTTTAATC GCATCAGCGTATCTCATCTTCGGGATGACTTTGAGTATCATTAATCACCA CGAGAATGCAATATGGATCATTTTTATGACCAGCTGTGTTTACATTCTAA CGCTGGTCTACTTTGTATATGGCTTCGTTTTGAGCTGGTTCTCCGTTTTC TATAAGGTAAGAATTACTCACaatcatggcgttctaaatctaaaggccgg tctccactttcgcacgaaatgagccacagtttttttcttaactttttttg cctgaagaaaagattacggcataaaaaagtttcgcgcgaacaaaaaaagt tgaaggaagttcaacttttttcattcGTTACGTCAatatttcgaccaatg gaattacttcatttttcaaccgaccaataagcttacaaaaacgtcaaaaa gttttcgctcatgtcgcacGAAAGTGGAGACTGGCCTTAAGGCCTAACAA ACgtgaattgacgtcaaaatccaAGGGGCCtatttttgaagtcgttgcat tgtgGCGTAAAAAGAAGAGTGGAAAAAAGTTGAATTCTGAtgagatttag aacgccatgctcACGACGTTTTTTCAACGTCAATCTGACAATATTTGGAC GTTAGGGACGTTAGAGAAACGTTGTTATGATGAGAAAAGATTTGGACGTT TTTGAGACCCTTTTAgagaatttttgtgaaaattttgtaCGATTTTTCCG TTTTCTATAAGGTTAAAATTCAGGTTTAGAGCTTTATGAACTAGATCTAA AACGATAACTAAGATTTCTCGTGAACCTAAAAATGTCTACTAGTAATGCT CAATTTGAGGTGTCCATTGTTATACCAACGTATCACAAGTGAGACACTTC CTGGCCCGGCGGGGGgaactcgattcaaaaacgaacCGTATGagtctagc ctttcgggcttggaagtcaatgattCAACCCCACTAAGTGAAGTGGGTTC CGTCGGGGTACTAAAGCAAACCatttattcaatatattttatatatgtcT TTCATAGGTCGAATATTGTCGAGGTAGTACGTTACGGAACGACCAATGTG GTGGTCGAATCCCGAATCGGACTTTCGATTCCGTTTCCAAGAACAACAAA GATGCTTTGAACTTACAATATATACCGAACAAAAACGCCACAATCTCCAG CACATCATCAAGTGTTAACGGTAGTACAAGCCAGCTTATGACTCAAACCA GCGCTTATAGTCAATACAGTGTTGATTCTATTATATTGGATATAGAAGAG AATGTTAGGCGTGTGGGTGCGAAACGTGATCACAGAGGTTCTAAACGTGA TCACGGAGGCTCCAAACGTGACTTACATCACGCACGACTACAAGATAACC GGCTTCCGTCAATGAATTCTGAAGTTTTCTTATCAGAAACTATTGGTGAG GTCACGTGGTTTTTGAAAATCTATTGGATGCTTTCATCCAGTGTGCTGAC GTTAGCATTTTTAACTGTCCTTGTTTACTGGACCCTATTGTTTGATTCGA ACCAATCATCGCACGCTCTACAATGGTACTTGCGCTGTGATCGTCACGGT CTTGCATTCTTATTGGTTCTCGTTGATCACATGATTAGCCGGACACCAAT CAGATTGCTGCATTTTATATATCCATCCATACTGATGCTTTTGTACGGAG CATGTAATGGAGTTTATTGTTACGCAACTAAGAGGGTTGTTTATTCGAAA ATGGATTTTTTAGAACAGCCGCTAATCGCTGTTGGACTTGTGTTATTATG TGCACTAGTCGCGTCTCCAGTTGGACAacttattttgtattttgtggTAT ACAGGCTAAAGGAGAAATGTCTGGCATTCTACTGAATACTTTATGGTTGA GGTTTAAAGGCTAGTTATACAGCTGGAACAAAGCCTTTTATGGATGTTGT ATGGACATTAAATGAACGTTGTGTCAGCTCATGAAGCAACACCTTCTAAC TTCctaattttttcagccagtcgGGGTAGAAAATTAATGAACTCGAAGAG GATTgatattccaaaattttttatggctggggatttaagtTTCATCGTTT TAATGTGAGAACAATCAGTTGGGATGGAACGGATGATTTTTCACGGAGGa caatatttttgccaattttttcagtgagAGAGGACTtcatcgggtctgtg agaagggaatgTCATGGAAATAAAACTTCCTAATACAGAACACCTATTCC AAGGGGATTCTATGTTATTGGCTACTTGCAGATTTCAGGCCCGGCNGAAC ACCTATTCCAAGGGGATTCTATGTTATTGGTTACTTGCAGATTTCAGGCC CGGCGGAAACGGGAATGGAGAGGCTTCACCCTCCCCACCTTTGcggagca
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066149TCONS_00066149Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066149-proteinTCONS_00066149-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_451supercontigscaffold_451:458136..461335 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.07 0.02 0 0.03 0.13 0.1 3.61 3.69 5.5 3.57 2.36 3.51 2.94 1.66 4.57 4 3.2 2.7 5.19 3.74 1.35 1.32 0.98 0.72 0.73 1.03 0.3 0 0.15 0.28