XLOC_041609 (gene) - C. hemisphaerica

Overview
NameXLOC_041609
Unique NameXLOC_041609
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_456:373369..377589+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041609 ID=XLOC_041609|Name=XLOC_041609|organism=Clytia hemisphaerica|type=gene|length=4221bp|location=Sequence derived from alignment at scaffold_456:373369..377589+ (Clytia hemisphaerica)
ACCGGATCTTGTGTAACAGTGATTCATGTTTtcctttgaatgttttgata
tcAATCAACAGTCTAGAATAACTTTattaaaattaacaattttcaaaGTT
ATCTTGTTTTAGGTAAACAGATTCAAAAGATTTCATAGATTTTCATTGGT
TGGATATACAAGTTTCTTGAAGAAATGTGGTGTTGTGCTATCTTGGCATT
GGTGTCTACTGTTTTGATAAAAGGTGAGATAATACTGTAATCATTGACCT
TTATAGGTCAAAGGACTGGATTGGGAAAAGTTTCTCGATTCCGGCtaaga
aaaatctttgatcggagttttNCTTTATAGGTCAGAGGACTGGATTGGGC
AAAGTTTCTCGATCCCGGCtaagaaaaatctttgatcggagtttttttga
aagaagtATCCTTTAGGTATACTACCCATAATGGGTGAAATAATTTATGA
ACggaaaatttgattgaattatgaATTGACCCACGTCGAATAGTTCTACC
AATAGGGtaccaattaaaaaaaactatgatCAAGGATATAGCTTGGTCTA
AGGTAGTGAATAATAATGTCACACGGTAAGGTTTGTTTCATTCTTAATAT
CAAACTATGAGCTATTCTATTGGTTCAGACTGACGTTTGTATAAAAATGA
GTCAAAACTTGTGCTCGTTAAATGTGAAAATGTGCTCAAAGTGTTCTTCC
AAATCAATGGAGTTttgacattctcagattctgtTGCCAGATTCCACGAT
GGTGATATTCTGAGCATAGTCTTAATTTTTTAGACAGATTCATCATGAAT
GTTCTTTTAGAGTGTATTATTGTAATAAAAAGGCGTGTATCGAATTATCT
GCAAAAAAGGCTTGAATGACATTAGGGAAAGAACTAACgaggaaaaaata
taaagataaCACCACCTTTTTCCAGGTAATGATGGAATTCAACCTACTTA
TCTATCGCTATCTATCAACAATCATCTCGATCGAAGTATCACCATCAAAG
CCAAATATGGTGAAATAAAACCAAAAACTATCCAGCCTTCTGACAAACAG
ACTCTTGTTGATTATAAAGACATCAAAATACGCGAAATCGCCTTCGAAGC
TTTTGATATGATGACTGGAGTTCCATTAGCCTTGAATGGGGACCGCATAC
TGAAATTGAAAACAAGCTTTGAACGTTACAAGGTGCATATCGTCGATGTC
AAACCTTTAGGTAAACTACGCAACCTCTTTTACGCTCCTATCAAAACACT
GGAGCTTcggatttttctatttttccctaAACAGAAACAAGGTTCAATTG
AAACTTTCCAACTTGAAAACATTGGAAGCATGGATTGGTATCATTTAAAT
TGTTGTTAAAAGAAACAACTGATCTTCTTCTCGTCATACATATTAGTTAG
GAAACAAAGAGAATCTGATCAAAATGTTAGAACATTGAAtataatgaatc
aacggatcctgcactaatgtacttcccagttttctcaccggcaagcgaga
ggtcgtgggttcaattcCCACTCGATTCTTTGAGAAAACTgtgaagtaca
ttagtgcaggatccgttgattcattacctataagtaatacgcacttgatt
tcacatATTGAATATAATATTGTGTTAaacctttttaaaggttttatttt
tacataagtgtttccgtttcatatcagacacatattttcatatcaggaca
gtgtctacctattgttatatgATGCTgatatataagcaaaaaattgtttt
ctgtttcctctttctgaccagtCTTGCTCCATATATGTGTCGATCCAatg
cgaaaaagcttgtgaatttaAATTGATGAGCAAggaaacgatatcactct
tatttaaaaacaaaacctttaaatcctgtacttgtttaattttacaagtG
ATAAATTAATGCGTTATCTGTTCAACACTTTGGCCAAACAAAAATATCCT
CTAGATTTCACcaatatgttttctttttcagccTTGGATTACATGCCATC
CTATCTATACACCTTCAAAAACAATGAATTGACTGGTTACCCGTTTTTAA
ATCCGGTCGGGAACACCACTCCCACAATCGGTAATTTAGGAATCGATTTA
TCAAAAACGGAATTAGTTGGTGAAATAAGAGGTTGTTTTTTGAAGCCAGA
CGATTGTACAAATGGAACGACCATTGGTGTCAAACTGAAATTCGAAAACA
TATCAACTGATAACTCACAGAGACcaaaaattcaatatattttaCGTTCT
CATGGGATTGAACTTATCAAAGATCAGTATAAAAGGCTTTGTGGGTTGGT
TCGATCACATTATCCGAGCAGGGAATGGAAGGTAAGCTTTAAAGAGAGAG
GGCACCAATCAacactaccgtaagttggtctaatgtcgacacccctcttc
taatttcgacaccttTCTTTGGAAATAGGAATAATGGGAAGGTCGGAATA
ACTgattgaaactatttttctttggttagCGATTAGAAGAGAGGAAcaaa
tctttagtctatcagtaGTTGTGACcttcctatctttaaagaagggtgtc
gaaattagaaaaagggtgtcaatattagaccaacttacgataTATGCCTA
AAAGTGATTAGGTCTAGTTTTCCAGAGTGGAATGACGTCCAGAAATAGAT
AAACCTAAAAAGGATTAATCCCAGGAAGGAACGAagtcaaaacaaagttt
tgtaaaGACATTGTATGGGCTAGTTCGATCACATGATCAAGTTCTCCATC
AAAAGCCAAAGTGTTTTCTGTAACTTTTTTGTAAGAGAATGGATGGGTAG
TGACTACTTAAAAGTTTTTGTACATTATTCTTTCACATTCTGTCCANGGA
TGGGTAGTGActactttaaactttttgtacattattcTTTCACATTCTGT
CCAACCACTTTTTCATAGAGTTCATCCAATATCGTTTTTCCCACAAGCCT
AAAATTATACATTCTTTCCTTCAAGGTTTGTTTCAGAGGCGTCCCTACGT
CCATTTGGATTTATCTTACACTAGCCTGGCACCCTAGACGTGGCATCAAA
ATGTACATCAATTCGAGGCTTGTCAAAACTAATAGATATGGTCGAACAAT
CAATCAAAGATTATCCATTCAAAAAACATTAAGACTAGGTGATGGTCATC
CTGATTGCAGATTAGCCTCACTGTCACTGGTAAACAAACAGTTAGATGAA
TCACAGGCTGGTCTTTTGATGTTATTCTTCTGGAAAGGTAAATTCCCTTT
AGCAATTTAGTCTCGCGGGTTACATTTATTCGACCACCCACACAATTCAA
AATTGATTAGTTTCGTTATTTCGTTAAATTTAAAGTGACTTTCCTTTATG
TTCTCTCGTACCCTTTCTCTTAGTCTGCTTTTTTATGATNTAAATTTAAA
GTGACTTTGCTTTATGTTCTCTCGTACCCTTTCTCTTAGTctgctttttt
atgattttcattGCTTACGAAAGGCATTATCATGTtcattatcaaaatca
aaaagtgtgTCAGCTGCTATGGgtacaatgggcttttccagaaaaaattt
tacccccactgttgaggatattgatttttggaAGTATCGAACTCCCTAGA
TATCCTACTTCCTGGATATGagttataaagatgcttacccctggatatca
tattttttacttgaaaagacactttaccccctggatatccactcccTTGT
AGCTATTTAACCCCCTGGTTAttcacttttgaacaaaaatcgttaatccc
ctggatatccgatatcctcaacaggggggcactgactatttctggaaaag
cccaatattaCTACTTCTTTCTTCATACAAAGGTTACAAAAACGATGCCT
CgtatttttactgattttttgtgctttatttcattatttcagGTGATCAT
CAACTCTTTTGGACACATGTTGAATTTTACAACTTTGCTTTACTCAATGC
TGATGTCAGTATGAATGGAAAACATAAATATCGAATGCGACCGAACACTT
TTGTAACCATTACCTCAAAAAACCTGATCGAAGATGGACACTCGACTGCT
ATTGTTGTCCGCGCGATTGTAGCAAATGGAAAACAACTCTATGTAAACAG
GAGATTGAATTCATTGAAATTTATAATGAAAGACTCAGTGTTAAATCATC
ATCAAATACTGATAACTCATAAACTTTATAAAGTAATCAACCTATGAAAG
ATCGTTACTAAAAGGAATATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066499TCONS_00066499Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066499-proteinTCONS_00066499-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_456supercontigscaffold_456:373369..377589 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.6	2.65	2.36	1.05	0.93	0.64	0.74	0.48	0.17	0.45	0.64	0.63	7.78	9.03	4.65	2.35	0.24	0.66	21.41	14.77	0.61	0.49	0.79	0.36	0.15	0.33	0.12	0.21	0.25	0.13