XLOC_041615 (gene) - C. hemisphaerica

Overview
NameXLOC_041615
Unique NameXLOC_041615
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_456:556405..565048+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041615 ID=XLOC_041615|Name=XLOC_041615|organism=Clytia hemisphaerica|type=gene|length=8644bp|location=Sequence derived from alignment at scaffold_456:556405..565048+ (Clytia hemisphaerica)
AACGCATGGAGATTTGGCGGGAAAATCAAGCCCACACACAATTTTAGAac taaaaaacgaaaaacttGAACTGTGAACTAAAAGAAATTAACTGAGCTAG CCACTACCATATACAGTATATATCAGATATTTCATATTTAGGTAGTTAGT TTTCAGTTTTACATTACTTACTTTCTGTTCAAGACATGGAAAATGcaatt aaaaatttaatataATAGTACAGTAGTACTCTGTATGTATACACAgtagt cagtcagtcagtctgACTGAGAATGTGACTGACACTGAGTCAGTATAAAG AAATCCTTCTAAGGCCACGATCACAAATAAATTGTGTTTGCGTCGTCCAA CTGactgataatttttcttaaatctcCAATTATTTTGAGGCGAGAAGTCA CAAAATTCCATCCTTTGCTTCACCCTCCATCTTTACTTCAATCGTGCAAG TTTCATTGTTTTAGGGCGGAAGAATTCAAACAGACCTAATATCAAACCCT TTCCTAAAGATCTGCGGGAAGGtgttatagaccttttttcaaagaggcca ccctgttgaataattatttagtccagcagaaaaacaatgataaaaccacg cataattattacaatatgcatgatacagtaattatgcatggctctatcat tgtttttatggctggactacataattattcaacaggacgtcctctttaaa aaaaggtctattatctCCCTAGTCATCAAAAAAGTAGAATTAGCTACCCA TGCATAGATTTATAATGAAGCCCAATGGGCTAGATATTGTGCTTAAGAAA AGATGAACCACTTAGAAGccaaaaacaaggaaaatgataaaagaagaGAT ACAACAGACAAAGAATTTTATGAAAGAGTCATCACATTAAACCTACACTG AAACAACCAAAGCACACaaggaaaatcttaaatctgttgttgcggaacaa aattagaagaggagaggagagaaaaaatatttggcGCCCCGAAAATCTTT GGTTTAAGAAAGCTAAAGcagctttaaaagtaaccctTTAAAAGCTCAGC AttttagaaaagctgcacaATTTTTTCtgcatttcagcttggaggtGTGC TTAATATTATGCTTAGAAACTCAATCTAAGTTTACAAAAACGGCCCCAGC TCAAAGTGCTCAGAAAAATCCCTGAGTGGGGGTAATTTTTGactgttcaa aattttacatttttggggcctgggcacTAATCTTTTGGTTTGTATAGCTA CAATCAAACGAGcatatgaataatttgaagctattgaagttgagcccagt gtgTTGTGCACATTGAACAAAGCCTGGTCAGTCctgatttcttttttact ttgaattttCTATTGATTAGCCAGGGACCTTCCTAAAAGTATCAATCGTT CTTTTTTCTCTTCAGACTCAACAAAAAAAGTATAAAGTGAAAGGAACAAA ATGGGTGTAAGTAAAGtacaaaattaaattaaatttgaggtgatttttct tgttttgttcCAGGATTTTGTTAATTTGAGTCTTATCTGCAAAACAAAAT CTCGTCAGAGTTTGAAATTGAccaatttgaaatattcttGGTCAAATTCT CTCGCTAAATCTTTACTATAGAATGGTTTAAATAAAATTGTGCAGAATTA TATGGTTATAAtgatttttatataaatttgaattatagaaaaagtctacc aaaggaaaggaaaagaaagaaaaaaggaaagagGTTGGATAAATTTAGAT TGTAATCAGGCTTGAAATAACAGTCTGTGATTTTTAGGGTCCACTTTTTA TTGATGCAATATTATAACTGGTGATATCTGGATTTATGTATCTGTCAGAG GActttcatactatctttttagTCAATGTAGGTTGTAAGGAATGAAAGGT TTTCaaatttccttcattttttattaGTAGTAGGCTATAAATATTTACAA TCTACTATGTTCCTCAAGATCAAGTTAGGTCTTTTCTNCTTCATTTTTTA TTAGTAGTAGGCTATAAATATTTACAATCTTCTTTGTTCCTCAAGATCAA GTTAggtcttttctttttataggaAATTATGAAGAAGAATGAAGCTGTAC TTGCAGTCAAAAATGCAAACATGGTATATATGTATTttgcttaaatattt tcaatgtaCCAATGCAGAAGAACTAGCcaaatttttgaattctttgaTTA AATTTCAATGTTGCTAAAATTATGTCACAATTATTCCTTTTTGAATCGCG TCTGACAACTTCAAATTATAATCTTTAATTCTACATTAGGCTGATGACCC ATTAGCTGCCCTTCCAGCATTTGCTACTTATAAAAGAAATGAGTAAGATT TTAAGCATCATATTATATAAGAGTGGGTGTGTGCAAGTCTtgttaaaaac tgtttttttttgttttttgtttactttttgacAAGCATTCAAGAGTTCTT TGATGGGATAAGGAAGTTTTCTAGGTATCATCAGAGTCCTAATGGAAATT TGAAGCCTTATCTGCAGAATGTTTTTTCAACAACAAACTTCCAACACTTA TTTTATTGAATGGCATTGTTTTATACAATTAATCTAAATTTGTGTGACCT TCTCTGGTAATTTTGGAAAAGCAGACCTTTGgttcattttgaagttttta gaaatttcagaaaacgtCACATAAACTTCAGCTTTTTTTCCCAAACTACC CTGTGATACGGATTAATAACAAAATTTACTAAAATCACTACTGAGAATAT TTCAATACCAGAATGCACCGAAAGGAATAAACCAAAATGAACAGTGAAAA CAACCATCAAATCCCTGCAAATCCTCGTTGAATCTTAAAATTCTTTGata aatttaactgaaaaacaTTGAATCCCTGAGATTTTGTTAATCTCAATGTT TTATGTATGAATTTTTTAGATTGGACCTGACGTTACATAGCAAGAGGGCT AGTCAAATGTCAGAAGATGAAATGGATGTATGTTACAATCTGGTTAAAGA TAACATGCAATTAATGTGAGCCTAATTTCATACCTAATTTTTATGTAACT TTATTTTATGGGAAAccaaattaaaggttttatttttacataagtgttcc agtttcatatcagacacatatttcacaTCAGGACAGtatctgcctattgt tatattatgctgatataagcaaaaaatgtttttctttttctctttctgac caatcttgctccgcatccgtgtcaatccaatgtgaaaaagcttgtgaatt aaaattgatgagtaagcgaACGATATAACtctgatttaaaaaacaaaacc tttaacataaTCTTGTTTACGTAACATATTTGAAGAATTATTTATTCATT ACACCCTACTGCTACTGGTTCCTGTCTACGTAATCTTAACAAAGGGAATT TTGTTCTTTCCATGGGTTATTTAATGCTACAGTATGTGCttactttaaaa attttaggtACGAGAACAGTAATTGGGGATGgaatgaaaaagagaaaaag attgaaatgaCTGAAGAAAATGCTAGGTAAATGACAATTCTTTGAGatta atgacaaaaattctaGGAAGAGAGTACATTAAGAATGATTTCTTATAAGG GGTGAAGCAGAAAGTTATCCAGGTAATAGTACAAATTACAAAGGttagaa atcaaaatcttttgaaatgatTAAAGCCTTCTAAATTACTTGAATTCTAT ACAAGTTGAAgaactttcttttgattttagatATTTGTATGCTTTGGACG GTGAAAAGAATATTGTTGCAATGACACACTTTCGATTTGACGTTGATGAT GATGTAGAAGTCATATACTGGTAAGTGTTATACAccttcttcaattttta aatatatccGTTGACAAGAGGTGACAACTGATGGTGACCTTCGCAGTAGA GTTGGATTTGgctaaaatcaaataaatttggTTGTTATATTTCTTTTGTA CTAATAAAAGCATAGTGGgcaacacccctccaacccccacctgaaaaagg tcacccccacctacatagggttacccccacctgaaatctcATATCAGCCC AACCCCCACCTTTTTCAGCAACCCCTNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNGATCCCAGTTAAAAGTCCTGAGGACTACAAACTGGA AAGGAAAAGActggagaaaaaatgaactCTTTTTAACCTTCAGAACTTAT GACAGTCAtttgtttctatttttatctagtatagtatgtggaaagttgaa aaagacaagaaagtacaaaatcaaaggaagttaaatacagaaaacttgac aacccccacctgaaaaatgttacccccacctacatagggttacccccacc tgaaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNccccccccccccccagaatccag gggggggtgcccactatgAAAAGTTATatcaaataagttgaaaaagatTG TCAACAACAGCAAAGTGCTCTACCAGAAGGCGCTTTATAACAAAAACAAT CTatgttgaaaacaaaacaaagtgcTCTACCAGAATGAGCAATAATATCA AATCCTCCTTTCAACCCGTCAGCTTTTTTTTTACCGTAAGGTTAAATGAA TAAGTTGTGTGTGGAGTTCCCCTTTTCGTAACTGTTCCCATTGATTAATG gactcaatttttcttttagttaTGAGATTCAACTTGTAAGTTCAATCCGT GGAAAAGGTCTAGGGAAATTCATGATACAGGTTCTCGAACTTATGGCATT GAAGTAAGTTGTTTGGAAGAGACTGTCGCTTGCTATGTTGAGTTTACCAA ATTCTGAAAAGCAAGGTCTCATTAATAATTATGTAACTACATTAGAACTG CATTCCCATTAGCTCATAAATGGACTCTCAAATGTTATAAATTCATTGGA CTAGCCCCTTTAATATCGGGAGATCTTTTTCAAGCCAAACAAAGTTCAAA TTGCAATTGTGCGAATATCCTCTGGAAAAATGAgaacatttgcaaaaaaa gcCGTGGAAAAACATGATCTATTGCCCTTGGAAAAGATTCTACTACTTTC CGTAAAgtaagggtggacgaactaaaatcaaatttcagaatAGCTTTTAA CCCCCGGGAAATTTAAACAAGGTTTCTAGAAATTACAACCTTAACCTTGT GCCTAAAAATAAAATGAGCATATCATTTCAAATCTGGAAGAAGGAAATAT TAATGGGTGATGCTTTGTCGTCCAACGCATTgggaaaaaaacaatttaaa ccaaactttttggaaaaatgcaAAACAACGTTTTATAGGACCCCCTGGGA TTTTTTCTTTTGGGACACCTTGGAAAAGTTCGTCcatcattgggctcttc cagaaaatgtttgtACATGGGgcggatatattggatattttgtccgtggg gtagtgaaaaatctgcaaaatttgccttgttttgggGGCAGGCTTGCTct gattaggggtgattttgaatgtctgGGGTCAACTGGCTTGTCTAGGGGTG AGATcagtgtccagggggtcaaaattcacaatgtccgggggtaaatttcc aaaatttaaatgTTATATTCTCCAACccccaaaatcaatttttttcttga agagcCCATCGTGTATACATataaaaatggaatggcccattgacTTAACA TATTTTTTATGTTGATGGATCTTAAAGTTTTCCATTTGTTATCAATTTCA GAGCTAAAATGAAGAAAGTTGTGCTAACAGTTTTTAAAGGTGagagattt ttattttcactgcCTTACCCCATTTCCATTTTTTAAGGACGGCCCACTCC CGAAAAAATGGGGCAGGGTCGCAAAACCTTCTGAAGAATTCGACTTCgtt ttggaatattttctgATTGTCTTTTGAATTTCCTTAAGAAGAGATTTGAT CACTTAGGCACGTCAATTTCAAAGTTTCTAGGGGCAAGGCAATCAAAAAA GGGTATTTAATCCGACGATTAATAGAATTGAAGAGATAGCATGAAAGGGA ATTGCTCGGGGTTCACTTAAggtttttgatagactggatggcgcaaTCAA TTGGCCCAGTAGTATATGGCAGCTCTAAATTTTGAGCTAGATTTTAGATG TTGTTTTTGCCAATTtaaaaatagtcgaacgtgcgcaacgcactgggctc aacttcagtggcttcaaattattcataggcccaattgtagacccccagat atttacccaatgaacaagtgtgccaaatttcaaccaaatccgaccatttt ggaggcctgtaggctgcttcacagctttagcctcgttttggcaaaaaact catccctaggccccaaaaatctaaatttttgaaaaatgcaaaaagcaccc ccagatattcacccaaggaacaagtgtgcaaaatttcagccaaatcaaac aattcttaAAGTCTCCAggttgccccaaagttttagcctcgttttggcga aaactcgtccccaggccccaaaaatcaaaatttccaaaaaatgaaaaaaa acaccaccagatattcacccaaggaacaagtttgcaaaatttcagccaga tcgaacaattcttaaagtctccaggctgccccaaaattttagcctcgttt tggcaaaaaactcgtccccaggccccaaaaatcaaaatttttgaaaaatg aaaaaaaagcccccagatattcacccaaggaacaagtgtgcaaaatttca gccaaatcaaacaatttttgaagtctccaggttgccccaaagttttagcc tcgttttggcgaaaactcgtccccaggccccaaaaatcaaaatttttgaa aaatgaaaaaaacacccccagatattcacccaaggaacaagtgtacaaaa tttcagccaaatcgaacaatttttgaagtctccaggctgccccaaagttt tgggacatacacacacacagacagacacacacacacacattctcagattc taactcaactgaagttgagaaaatgATGGGGCAGTGTTTTTATTAGAAAA AGGGTATTGTAAACCTGTTTATTAACATGTTGGTTTCTCATGCttcttta ttatatttttcaatgcTCCTAAGTAGCTTCATCGCTAATTGAAATATtgg tatttttctttcaaagcgGGCTCGTCAagtgctcctagtctacttcactg gactcagaaAGCATTATCAGAAAGCAAAATTCAGCCAGTAGGCTGTAGTC TAGAAAGAGGACGGATCTAGAGAAATAGGGCCAGTCCCCTTTTTCAATTA TTTGTAAAACTCAAACTTTGTTATTCACATAGAGCCACTGACAATATAAT GTTTCCTCTTCTCTTTAGCAAATTCAAGGGCTGTCAATTTCTTCAACAAA CTAAAGTAAGTCTTTTTTACCTGACATATCTGGACATATTCCTATTTTCC TGGAATCAATTAGAAATATAAATGTGATGACAATTTGAACTCGTAATGTT AGGTAGAACTTGCACTTTATTCATTTTGATCATTGCCTGACCATAAAACG GTCGTATGAAATCTTCCATTTATACCTAGATGTGTCATACCCAGcgggca cacaacgttgtttcaacgtttatctaacgtttacaacgtccatataacgt ccTACTTTTGAATTGTCTGCGTATCAATAAACAATCCCATAGCGTACCTC GGTGAATTTAAAAATAGTAACAAATTTGCACAAATATATTCGTTTGTACG ACTTGCAATCCCATCCTCCCTTGCGTTAATTTCTCTTGCACATTAAAATC ttacaatatcaaaagaaaggcAATATCTTTCACGGTTTTCCAATAATTTC GAAATGAACTATGTGATTGAGACTCGTACAAATTTGAGTTGACATAATTA TGACGTATTGGACGCGGAGTTCATGttgtaataatatttttgaattcctc tTGCTCAGATACACTATAGACTCCACTTCACCGCATTACATTGACCCTCT ACATCCTGAAGACTATGATTACGAAATTATGAGCAAATCTCTACCAATCA GGTGATCGAAAGCGCTACCATTTTTAAAGATGATTGAAGGTTTTTTGCAC ATTCGCTTTAACTCTGACCGAAATGACACTCATTGGCCCGATTAAGCTCA AAATTTCAATGTGGTATTGAATACGATCTGTGATCTTAAAGACAGATTTG GCTTCGAGCTGTACcaaaaattgtttgatggaTTCAAGAGATTTTTTATG TAAAGAGAAAATGTaagacaaaaaaagattttttatagaaaactTTTATT TAAACGGAAGATAGAAAATCGGAATTATATTATATGACATTGCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066516TCONS_00066516Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066516-proteinTCONS_00066516-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_456supercontigscaffold_456:556405..565048 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
NAA40PREDICTED: N-alpha-acetyltransferase 40 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
146.8 142.14 121.34 105.2 13.34 10.09 34.88 36.26 53.21 35.26 31.97 28.83 20.47 19.24 22.77 24.64 49.94 44.83 3.93 8.39 36.83 35.44 67.55 61.65 27.93 31.49 30.76 18.81 30.37 28.89