XLOC_041617 (gene) - C. hemisphaerica

Overview
NameXLOC_041617
Unique NameXLOC_041617
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_456:685746..694485+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041617 ID=XLOC_041617|Name=XLOC_041617|organism=Clytia hemisphaerica|type=gene|length=8740bp|location=Sequence derived from alignment at scaffold_456:685746..694485+ (Clytia hemisphaerica)
CAAAAATCTTTATAATTTTTCCTTAGATTTTTTAGTTTACAGcttgattt ttgataattttttttcttgttgatGCATAggcaaatattttttcttactc ttttaggtaaaaaatgtttatttacaTCTTACTAGCAATCCCAAGTCTGT TCTTACTATGGGTGTTAATCACTTATGTGGAACATTTAATCAATTCGAGG AAATATCCAAAAGGACCATTCCCGCTTCCTCTGattggaaatttgaattt gctgagCAAAGATTTACACTTGAATTTCTTGGAGATTGGAAAAACGTATG GTGACGTGTTCAGTATTAGCATAGGTAAGAGCATTTTTCGGTGACAAATA ATTTGCCCGTGGATAAATGCCCCCGGGAAATTGAAGCAGTAAAGGCCCCC GGGAAGCCCCCTTGTAAATATGACCGACATTGAGattaaaaatattgcaa atttccggggatatttttcaaaatgaggGGCCCTTCCATTTCTAGAGTTT ATTGTTATGAAAGtataaaaagaataaaagaacaGCACAAGGGAAAATAT AAACCACCTTGTATCTCCACGGAATGAATCTCACAGTCTCTTTGTTTTCG AGTTGTTCATTTCTTGAGCCATTTCACGCGCCACATAACTTATGAAAGAC TACTCAAGAATTTCCAAGTTCCAGGAGGAGATAAAGAGCTCAAACATGTT AATTTCAAATCCAGTTACAGTTTATCCTTTCAAACACAGGTATGAAAAGA TACGTCATCGTTAATTCTTACGAGAACGTCAAAGAGGGTCTTATCACCAA AGGGCACGAGATGGCTGGACGCTCGCCAAGACTTAGTCTACTGGTAGCAA CTAAAGGACGAAGAACATTCGGTGCTATGGATTATTCCAAGTCATGGGCT TTCATCAGAAAATTAGCGTACAAAAGTTTACATTTATATGGAAGCGGCAT GACGAATATTGAAGATATTGTGACCGATGACGTAGATAAATTGTGTTCGA TTATCTCTGACGAACTTGACAAACCTGTTCCTATACAACCATATTTAGGT AACGTCTTGAAAATTGTCTCTCGTTGAATTCTACCTTTAAGATTTAAGAA ATTTCAGCTGATGAGCCTACCACGGTTTTATGAAAACAAAGTACATATGT ACTACTAGACGGTTCCTGTCGTCGCAATCATCGGCTAAGTGTTGCTGAAC GTACACAATGTTCCTGTactaacgcactttgtaataacgccacactttgt aatacctaacacactttgtaataattAACCTACCTCACTTTGTAATAAAA TTCACCAGACTTTGTAATACActccacactttgtaatacaccTTGCCAAA CTTTGTAATACCTAACACACTTTGTAATAGAACTTGACATACTTTGTAAT ACCTAACACACTTTGTGATAGAactgacacactttgtaatacgaAAAGCT GACAAACTTTATAATAAAACCTGAAAGTCAAATTGTGCAACCTTGCGAGC ATATCTACAGGGCCCTTTTGTATTGCTCGAAGAACAATCATTACATATCA ATCATTATATAGGCAAAGGCTACTTTTCCTTCTAATACTTGATATTATTA CCTTTTCAGGCAACACATTGGTCAATACAATCTGTCGAAGATGTTTTTCC ACAAACTATGAGATCGATGATCCTGAATTTCAACATATTCTTGAATTCAC CGCAAATATTGGCAAAGGAGTTGGTCTGGATATGTGGTTGGCCATGTTAC CTTGGCTTGTTTATCTCCCAACTTTCACCTCGACTGCACAATTCAAAATG CTGGTCACAGCAGTGAATCAAAGAAGCGTTATGACTCATCGAATGTTCGA GGAACACAAGACAACCTTGAATCCAGACAACCTTCGAGATGTAACTGATC AACTTCTCTTTCTATCCTCAAACAAAGAAGCATGGAAAGATGCCGGCTTC GAAGAAGTTTCTCAAGACCATCTCGAAAATACagtcaatattttgttttt tgccGGCATTGAAACTTCTCTTACAACACTTCGTTGGTTTTTCCTGTATT GCCTACACCACCCAGAATACCAAAAGAAAATGCATGACGAAATTGTGGAG ACATTTGGTTTGAGACACCGTCTAACTTATTCAGATCTGGACTCTTTGCC GTTCACCCAAGCAATGCTGTTTGAAACCAATCGAAAATCTTCAATTGCTA GAATCAATGTTGCACATAAAGCCATGGTGGATACATCAATCAATGGAATC AACATTCCAAAAGGAGCTCCAATACTGTTTAACCTATACAGTCTTCACTA TGACGAGAATCATTGGGAAAAACCGCACGAGTTCAACCCCCACCGCTGGT TAAATGCTGATGGAAGTCTAAAGAAGGAAAGAGCAACACACTATCTGCCT TTCTCAGCTGGAACTCGAGTCTGCCTTGGTGAGAAAATGGCTAAAGTTCA AATGTTTTTGATCACGACGAAATTGATTCGGTCTTACGAGATATGTCCAT ATCTTGAAGAGAAGCTACCAGGGTTGGACGAACGAGGACCAGGAGGACCG TATTCACCCGCTACAGACTATAAAGTGATCTTCAAGAGACGAATACAATC ATAAAACAAACCATAGCGAGCCAACGAACTCTGTTTTATAAGTTGAACTT CACAATAAAGCTCGAATCTCAAGGATTCAGTAAAACTTTTGCTGCTAATT TATCAGacttgtaaaaaaatgttttcatattTAGAGCAGTAGAAGCTCCA AAGATCCAACCTCATTTACTTAACATCCTTATGATTTTGGTGGcactgta aatatttcttctttttttaaggCAAAATTATGTTAGGCTTTATATCCGCT TTCACTACTTTGACTCTTAAACTACTTGAAATTCCAAAATCAACACTGTA CTTAGCTTAATCTTGTCATTTGACGATTTAGAGCCTCATCgttctaataa aattgttcttgtaaAGAAAGAGACAGTGCATGTCAAAAACTTTGTTGAAA TTTTTCGAGGTACTTTAAAGTCGAAGAGTAATGTAACAAGTCATTACAAA ATTCGGCTAGACGATTATTTTTTTACCATTGAATAGGCCAGCATCCAGCA AAAGGTATATCAATTTTGCATATCAAAGTTATTAAGGGCCTTTCTCCACC GACACGCTAATTAAACATtaatttggaaaaatgaaacgTCAAGCCATTTT TatgtaacagaaagctgtaTGTTCACTAGCAGATGGTGGGTTACCCTATT TTTGTTGCAGAATTTCTCCGCGCaatgtagattggcccttacggctttag cctgagaatgcaaatcgctctaaggagaccaggctgtaaaccagaacata aaatatcaaaaaatagactgtgaaatagtttatcCAGGCTAATAATAAGA TTGTGTTTCTGTGTGAACTCATATTTCACGTTACGCAATCAATCTTGCAG TGTAAAAAGAATCATAGCTTAATTGACATATTACTGAGGTTAAGGATACC atgataatcacgacgacggacgaaaaacgTAATAGGCtagtaaaaatatg aaatttgatttgttgaaactcactagcctgttaaatctTCGTtagtcgtg attttaccgatttacttaacttcaCTATTGTGATATCTATTTGTATCATA AAGACACAGAACACATTGGGGGCGTTCACGCTGGAAGATTTCCTTAGTAA AACTGTAGTtataaattcttttattttttacaatagAAGCGTGCACGCAA CAAAAGGTTAACCGCATTGCATGGTcacttttatttgattttccttAATC AAAAGTCATAGGCTCCATTGTCTTAAAGGTAGGGTAGGagccacagatat ctaagcccgaagggctagataggcaactttaagctttctccagcaaaaaa aagtgaagcaaaaatttgactttttaaatttcgtgccgaNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNtcacgtgactctggtaggaaatccttccaaa gatgagcttcactttttgaacaaagctgcaaatctagcccttcgggcttt acagatatctgtggtaggAGCCgcctttaaaacaaaatattttattaagg aagcataaacaaagGATGCGTgcaattaacaaaaagttttgcTATTTCAA ACAGGaatgaactgaggaaaaaataGAAACAGTGCAAACagtggtcgtgt tcagaccaaggtttaaagtaattaagtctacatgtttcttttatattcct tttgtatttagctGCAGACTCCTCATAAGTTAAACCAAAGNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT ATCAAAAACGAAGCCCCACTCAAACAttcaaaaggggattcctttttcct ctcttatgtaatccatctaaaagatgaaatagcAATTAAGTCGTTGTATT TCTTAATTCTCATATCAACTTAGTACTACTTacgccttaaacttaaactc tcatgtctgaacacgaccagtgttgttgatgtgtaagcatagtcattata aaaacactggtctggaaggcttttgtctctttttattgttaaaagatgga gcttacgtaccaaaatcgatttattttgcaaactttttgatcatgtgatt agaaaatagaccaatcccaagaggagattttggtaacgtgataaaaaagt attcaaattgtaacttgtcttttgtttgtaacaaaagaaaattgaacaaa aagctaaaacaatagaccggggttttttataatgactatgatgtAAGACG AATGCAGTTATTGAGTACAACGATTACAACAAATAGTTTTGCGGATTTCA AGGGATGTATGGATATCAATGATATCAATATCAATTAATCACAAGCGAAA TTGTaactctcaataaaaaatcaataaatgagAGGctttaagcaaaatca attaacatgttataatagatctcgtcaacctacaaagaactgtaataaac cattgtattcatccatcataaatcttAACTTTGATGGATTTAATTAAGGA AACCTTCCAGTGTAAACGCGCCCTTTGTTGTGATGCAAAAGTATAATTGA GATTACATTAGTTTCAAAAAGTTGTGTATGCATAGTGGAGTAGAGGAGCA TAGTGGAAATAGTGGTGTCTAAAGTCTAACTTGTTTACAGTATTTGAttt aattcttttgaaaaaaataggaCTACCAGACTTACCCTGATTTTGCCTAC AAATAGAGCTGGTATGATCTGGAAAGGGTTATTTTGCAAAGATGAATAgg caaatattttttcttactattttaggtaaaaaaatgtttatttacaTCTT ACTAGCAATACCAAGTCTGTTCTTACTATGGGTATTAATCACTTATGTGG AACATTTAATCAGTTCGAGGAAATATCCAAAAGGACCATTCCCGCTTCCT CTGATTGGAAACCTGAATTTGCTGAGTAAAGATTTACACTTGAATTTCTT GGAGATTGGAAAAACGTATGGTGACGTGTTCAGTATTAGCATAGGTAAGa gcatttgttttatttttggtgACAGAAAATTTGCTCGTGGATGCATGCGC CCGGTGTAACCGTAAATCTTTACTCCCCGAAATTAGTCTAGTGAAGAAAG ATGcctttttattagaatttttattGGGCCAAGAAAAAGCTGTACGAAca agaattttttgaattaaatttcaagaattatttcaaaataaagaaaacag tgTTGCAGTGTCAAGATGTAGCCAGGTTTTTTAAATATCTCTCAATTTTC TAACCCAAGCAAATCGcactcaagaaaaaagtttaaattcaatttaaatg tcaaaataacAGTAAAAGTTTTTCCATATAGTTTTTGTAATTTATTCATG ATAAACaggaaaaaaaagattaggaaacCGAATGTTGATCGTGATCTATG CCAGTTTTTTGGTATACTATCAGGGGAGTAAAAATTTCCCGAAGGGAGTC ATTATTTTCGCGTAAATTTATACTCCCGGAAGAAATAATTTCCTGGAAAA GATTACTGGGGAGTAATTATTTCCCAGTAAATAATGACTGGAGAGTATAA ATTTTGGGGAGTAATATTTTACTGCGACACCGGGAAATTTGGAATAAAAG AACAGCACAAGGGCGTACCACCGCGGAATGAATCTgacagtttttttgtt tttgagttgTTCATTCTTCGAGCCATTTCACGCGCCACATAACTTATGAA AGACTACTCAAGAATTCCCAAAGAGCTCCTTCTCTGGATATCTCAAACAT GTTTACTTAAAATCCAGTTACAATTTATCCTTTCAAACACAGGTATGAAA AGATACGTCATCGTTAATTCTTACGAGAACGTCAAAGAGGGGCTTATCAC CAAAGGGCATGAGATGGCTGGACGCTCACCAAGACTTAGTCTACTGGTAG CAACTAAAGGACGAAGAACATTCGGTGCAATGGATTATTCCAAGTCATGG GCTTTCATCAGAAAATTAGCGTACAAAAGTTTACATTTATATGGAAGCGG CATGACGAATATTGAAGATATTGTGACCGATGACGTAGATAAATTGTGCT CCATTATCTCTGGCGAACTTGACAAACCTGTTCCTATACAACCATATTTA GGTAACGTCTTGAAAATTGTCTCTCGTTGAGTTTTACCTTTAAGATTTAA GGATTTTCAGTTGATGAGCCTACCACAGTTTTATGGGAACAAATTGCATA TGTACTACTACTAGGCGGTTCCTGTCGTCGCAAACATTATATAGCAAAGA TTACTTCTCCTTCTAATACTTAATGTTTCAGGCAACACATTGATCAACAC CATCTGCCGAAGATGTTTTTCCACAAACTACGAGATCGATGATCCTGAAT TTCGACATATTCTTGAATTCACCGCAAATATTGGCAAAGGAGCTCTTGGT CTGGATATGTGGTTGGCCATGTTGCCTTGGCTTGTTTATCTCCCACATTT CACCTCGACTGCACAATTCAAAATGCTGGTCACAGCAGTGAATCAAAGAA GCGTTATGACTCATCGAATGTTCGAGGAACACAAGACTACTTTGAATCCA GACAAGCTTCGAGATGTAACTGATCAACTTCTCTTTCTATCCTCAAACAA AGAAGCGTGGAAAGATGCCGGCTTCGAAGAAGTTTCTCAAGACCATCTCG AAAATACagtcaatattttgtttttcgcCGGCATTGAAACTTCTCTTACA ACACTTCGTTGGTTTTTCCTGTATTGCCTACACCACCCAGAATACCAAAA GAAAATGCATGACGAAATTGTGGATACATTTGGTTTGAGACACCGTCTAA CTTATTCAGATCTGGACTCTTTGCCGTTCACCCAGGCAATGCTGTTTGAA ACCAATCGAAAATCTTCAATTGCTAGAATCAATGTTGCACATAAAGCCAT GGTGGATACATCAATCAATGGAATCAACATTCCAAAAGGAGCTCCAATAC TGTTTAACCTATACAGTCTCCACTATGACGAAAATCATTGGGTAAAACCG CACGAGTTCAACCCTCACCGCTGGTTAAATGCTGATGGAAATTTAAAGAA GGAAAGGGCAACACACTATCTGCCTTTTTCAGCTGGAACTCGAGTCTGCC TTGGTGAGAAAATGGCTAAAGTTCAAATGTTTTTGATCACGACGAAATTG ATTCGGACTTTCGAGATATGTCCATATCTTGAAGAGAAGCTACCGGGGTT GGACGAGCGAGGACCAGGAGGACCGTATTCACCAGCTACAGACTATAAAG TGATCTTCAAGAGACGGATACAATCATAAAACAAACCATAGTGAGCCAAC GAACGATATCTTATAAGAAGAACTTCACAATAAAGCTCGAATCTCAAGGA GCCAGTAAAACTTTTGCTGCCAATTTATCAgacttgcaaaaaaaaaaacg ttcagTACAGTGGAAGCTCCGAAGATCCAACTTCATTTACTTTATTCCTA TGATACTGTTTCTTTTTACAAATAAGATGAAAAATTTGCAACAAGTTGAA TATCTTCTTTATCCCCTCCTCCTCCTCAACATTTGAGTTGTGGAGACTCT ATTGTAGTGATATTTTTATACCCCAAAAGAATGGCTGTTCGGAAAACTAG AGGATGAATATAAAGGTTttatctcaaaaaaatttttcccgttTTATACA cgcatatttcatatcagaaaTAGACTTTGTGTtgcagtttcaaaatttta gatattttttgaattcaaattattattacattcaaagatttttgaattct tcggatgttctcaactttttgagttttaagcctaaaaatgttcttagcat gttcttattttcaccattttgtgagtatttttgtccatat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066518TCONS_00066518Clytia hemisphaericatranscript
TCONS_00066519TCONS_00066519Clytia hemisphaericatranscript
TCONS_00066520TCONS_00066520Clytia hemisphaericatranscript
TCONS_00066521TCONS_00066521Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066521-proteinTCONS_00066521-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_456supercontigscaffold_456:685746..694485 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CYP17A1steroid 17-alpha-hydroxylase/17,20 lyase precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
18.27 16.97 18.92 20.14 5.87 4.75 23.11 22.31 14.48 19.29 39.56 14.22 30.56 30.37 25.81 25.96 12.7 15.51 28.3 23.64 13.28 14.74 18.1 19.37 13.79 13.36 23.59 21.81 24.18 15.43