XLOC_041704 (gene) - C. hemisphaerica

Overview
NameXLOC_041704
Unique NameXLOC_041704
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_458:154365..165621+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041704 ID=XLOC_041704|Name=XLOC_041704|organism=Clytia hemisphaerica|type=gene|length=11257bp|location=Sequence derived from alignment at scaffold_458:154365..165621+ (Clytia hemisphaerica)
CTTTTTTCAACGTAAAGCCTCGCTTTCATTTTGCGCGGGAAAGAAGCCAA TCTCAGCTGCAAGACCAGctttttgagtggtttttggaaattttagaacC AAAAAATACAATACGTAGTACAGAAACACAGAAATCATGAATGGTTCTGT TAAAAACATTcaagacattttcaaaaagatggAGAAAGTTGGTGAAGGCA CCTATGGAGTTGTATACAAAGCTCTAGACAGGCAAACTGGTAAAGTTATT GCACTGAAGAAAATAAGATTGGATGCGTAAGCTATTTgagctttattttt tttttaatatactgTATCCAGTGTTttttataccgtgagattgggtaact tgcatcagtggaggctaacatgcatagccctcaaatgaaagacctggctg gtcattaaaatacaaagttgaatcaaaacaaaaatggtagggtagagctg cgagcggagctgcgtagttgtattttaatgaccagacaggtcattcattt gagggctatgcatgttagtctccattgatgcaagttacccaatctcacgg tagggCCTGTTATTTAGGTTTTCTATGTCTATATGGGTTTTATGATTACC TTAACTTCGTATAATACCGACATACCCTGTCTAATAACCAGGGGGTGTca gtcaatcgaactgttcgcttatcgaactaatcgaactgttcaattatcga actaatcgaacttaatcgaaccctatcgaacgatagctgttcgattatcg aacccAATCAAACACCTATCGAACAAGAAaaactttcgtaaagttcgatg acTGTTTGATTATAGTTCAATAAAGTTTGATCACAGTTCGGTGAATCCGA Ttgaggttcgatcagttcgattgagatcgatgaagttcgattggttcgat tagttcgatttacaccttgccgcccaattttttattacgtattggcggcc gcccacgggcCATTCTTGCGGGGGGGGGCCATCCAATGTCTATCCCATCA GGCATCAGATAggacaagctggagcttttacaagctctttcatgatttgg ttggttgttgCAAAGGTACATATTTGCCATGCAAATTACATCACTGTCTG GCTGGGAATCCTCATATTGGACGGCAAGATTAATTTCCACTGCACATTAC ggtgcctgtgttttgattaaacaaccttgtaattttctgaaaggtaacAA CAAGGATGacagttacctgaatcaagttcaagatcccaagacaatcaatt aaaacttgaaaacttaaaatgagacaaaatgacagattgcgaacgtgcag cagccaaatatcaaccaaccagattttgtcattcaattcccgagacagtg cttcgatttttaaggccttgtttatacgctaaagcaaaaataattcGGCA CATGtgaatgggtcattgtttgaggtccggcaaaatttccgggaaatagc ctatccggcgatGTGCGgctctaggtgggttccgcctcccctgtagatct ttttcttgggaagttgatcttcaaattagttttcaaggttggcttggctc aaatttttttcatctatggcttaaattttaggcaatttctcaaagttttt gaaaatgttaatttcattgaaaagtgcctggttattttttcatgaattcc tttagaagttttgcggcgcatttttttgcttgagagtcaagtaaacgata tagcgctttcgcagcattaatctttgatacgcattttggcgggatgctag tgtgactaactgacaatCATCGAACCACATCAAACTTAAATCGCATTGaa ctcatcgaacatcaatcgaaccctatcgaacatcaatcgaacttcatcga acaaagaaCAGTCATCAaactaaatcgaacttatcaagaaattttcataa agttcgatcagctatcgttcgattttgttAGATAAGGTTTGATGGTTCGA TTACGAAAATCAGTTAGATAGGGTTTGGTTGACACCGCCTGGTAATAAGC AGCTACTGTACGTATGTATCTGGTCTTTTGAATATATAAATGGGCTTATA TTCTTCCCACCCAtgccagtttgcagagtatgaCAAGGCTGCACTTGAGG ACAAATTCGGAAATACCAAGTTCTGCACTGAAATAACGTgcctgataaat tttggtccagacaaggtgcacctatacctcaaaattttgccaaaaaggca aaaaaatgctaaaattagCTGCACTGGAGGAAAAAATAGCTGAACTCTGC ACTTGAGGCTAAAAAATTGTCTGAACTTGCAcctgaaaacatcaaattta caCCTGCACTTGACTATTCCGAGTTGTGCACTCGAGATCTTGAGCAAAGG TGCCACACTGCTCTGCAAACTGGGGCCATGTACGATAGCGGTAAAATGGA TTGGTAAAATGGATTGGTAAAAAGCGTATCTAAACCCAAATTTCAGTGCA CAAGTATTCAGCAGCAGTCCAGCTTTCCTATAATCATAATTTCCCAGAAG TAGCCTgagaaaatgtgcgctccaccacATTGTGAGGGAGGTAATCAAAC ACATTTTTGCTTGTGAGGGGTTAGGGCGGGAAACAACTTAAAAAAGTTAT TTCTGAATATAAACCCGggaaaatctaggaaaaacgcAATTAAAAAATTA GACCAGGCCATGTCAACAGAAACCAATCAAACCAATTTTTGTAACAGAAC CATCTGGTTTGGCCAGGTTTTCTGGGGGagaatccaaaattttttggcct aaacttgGCCTGATCTTACCCCATACATCAATCTCCTGGTCAAAAAGaat gttttgctttattttgacCCAAACATGACTGGACTTTTTTCAGGGTATGT TTGGGCTATAATGTGGGTAGTAAAAACTACGAGAATGAAAAATACGAGCT AATACATTAACTCAAACAAATTGGACTAATCAAAATATACCGGAAGTTCT TCAGTATATGAAAAGTCTTAattccgtctcaaaattctgcataattcatC AACAGTTCAAGAATATGTGCCAATTTGCTGTGTTAAATCGATTTTATCAG CAAAAAGGTCATAGAAACtagttcaaatttaaaaatttcgaaatttaatt ttttcaagatggcggcacCACTGCAGCTTGGATTGCCATTTTGTCtgatt tttcaactttcttttgcCTTATTGGCCCCACCCTGCCAGACGCCATCTTG AAATAGCCtcattttgggaaaaactttttttgaggcTTGTTAAATAGTTT TCGAGCACCAGGAAATAAATCGGCAGGGGGTAGGCAATTTTGCCCCCCCC TGGGCCAGGCAGGGGTAGAGAATGTAGCattacttttgaatttttatgat gGTCTTTAACTGAAAAGTAGACACCATATTTTTAAGGATGGATAGGGTTG AAggtaatttcaaattatttaagAGGCCTTTAAGAGATATTTGgaagatt ttcttcttttagtttCAATTAAAACACTTTATCAAGGCTAAAGGTAAATA GTTCACTGTCTTTTGTTCAGAATTTTATCCTTCCTTAGTATTCTAAAGAA GAAGGTTTGATTTCTTTTGAAGTTATAATTTGAGAAATTCCACATCAAAC AGGGTAATTTATTTCTGGCACACCCAGtacttcaaaaataatttcatcaG TTCCATCTacataaaaacttaaaaattgtcTCAGTCTTTTCTCATGATTT ATAGCAAAATATTATGAGGACGACCAAAATCTGAGAATATATCCACATCC TCAACTTTTCAGAAAATCACTCTTCAGGGTAGAAGATTTTTCAGAAAGAA TCCCATTTCAATCAGTTTCAATGGGAATATGATTAgagagatttttttat ttttagacaaATAAATTTCATCTATTAAATTTGTTTCGTCTAAGGTCTTT AATGAACCTTCAAATCAAACTACTTTTCTCTTCCTACATACATTGATGAT TTCTGTTTTCCATTTTAGTGACACTGAAGGGGTTCCAAGCACAGCAATCA GAGAAATTGCAACACTGAAAGAACTCAATCATCCCAATATCATCCAGTAA GAATCTTCAATGTTTGATAAATAATACTATTCTGGATTTAATGTCCGTTC GCATTAAGTGTGTATCCGTTCTTGTCTTGCTTGTCAATGCTTATAAATTC ATGggctacacaatatattggtgagcaatattcgacaatatagttctcgg accgtaatgtacggagTAAACAacaggtactctattataaaaaggagttt tctttttgtaaacaatTTCCCTATTTTGTTAGAATATTGCAATCGagttg acaatatattgcgggcATTCAGCAATAATACTACCAATATACTACCTGAT AATaaattgtgtagtgtatgtagcccttaaaaacttataccgggtgtccc agaaaaaagttcagctctttgaagtgaaatttctcgagttctatgaattt ttaaaagatcaatttttttgcattggaaagaggaaagataaacttaaatt ttgaggggtcatttatcaaatttggtcaactagatcaaaaattatgctga tatgaataaaaatttcacattttgaaaaGGCTCAAAAACGACCTATAAAA TTTTATAACCTATTTATTACTTTTTTGCAAGAATAAAGAGTTTAAAGTgg acatgaaaacaaaaaatgcttgaaataaTTCACTAAAGgactaaaaattt tcatttgggtcatttcaaattattttctatgGAATTCAGCTTCAAGTTTT GGCTTAAGGACCCCTAAAGTCAAAAGTAGCGCTGATTTCATCAGTGTAAC TATTGAAGTCAAATATCGGTTGGAATTATCAAATGtttcagtttttcaga taaatttctttgtttcaCCTTTgggaaaaattatttcaaaagctTTTGAT AATGAAGATGATAAATGAAGTAGAATAAAAACAATCTTGCTTTGCTTTAG TGGTACCAGAGGCGTCCTTCCTGATTTTTGCtgtgtaattattttttttc tcataaaattCTTGCATCGAAAGTCACAGCCtctgttttttgctgttttc caCTTCTACAGATCAAACTGGATCAAGAATTAGTTTTGGTTGAGTTCTTT CAGTGTGATTTATGCACATCTAATATGCTTTTCCATTATTTTTCTGTTGA CACCCTACTGCTTTTATTTCCAGGTTGCATGATGTTATCCACTGCGattc aaagttatttttggtttttgagtttttaacaCAAGACCTCAAGAAATACA TGGATGATGTAAAACCTCCTGGAATCAAACTCAGTCTTGTTAAGGTATAT TTAATTTTTCTCATAACGGCTAGAACAAACTATCCCCACTGGATTAAAAT GCAGCTTAAACCACTGATATGTTGCTACTTGACTTGATCGGGCTTGCCGT ACAAAAGGACTGgacgaatgttttgaaattcaacgATAAAAAATGTAAGA TAAATTAGAAAACAACATGGCACACAAGTCGACTTAAAAACTGGACACGC TTTCACGAGAAATCTGTAGGTCTAGCTAGTGTATAGAGGAATATGATATT TGTAGCTTTAGCCCGATAAATTAGAAATCCTAGCTATCAAGGAGGTATTT TCCATCGctatcagtattttcgtttttcGAATTCCTCTCCACTGGAAATG TTTCTTCGGGCTCAAGCACAACTACAAaggttaattttttgaaaagcaaA GATATACTTATTTTCAGCATAGAAAGGTGCACGGGATCTTTTTTATTCAC TTTTGTAATCTAGTACTCTCTCTTTTAGAGTTACCTGTACCAGCTGTTAA GCGGGATAGCTTACTGTCATGCAAATCGCGTCTTACACAGAGATTTAAAA CCACAGAATTTGTTGATCGATACTGAAGGTTTGCTTATTTTTACCGCAAT CACTTACGTAGTATAAATgcatttgatctttttttgattttttcttatac ATTACTCCTTTATCATCCTTCCAAATGCTTCAAATTACCTTATCAGCCCT CTTTTACCTCGGCCCTTAATCCGCCACCGTCCCATTTTCAGATTAAACCA ACgagggccgtaaataacgcgACAACCTGCAAAAATCACTAAGGAGGGTT CAAAATAGTTAATATTGACTTAAATTGGCCTTAAATGTCATACTTCTGTT TTAATggctttttctgaaaatttggaTATAAAGTAAtaacattagttttt ttttctcacactTTAAATCCTCTTATTAGGGTGAAATAGGTCAAAAATTA ACATCGCTTTTAGAGTTTAACTTTGACCCTTTTTACAAGTGTTTTTATGG TGTGCCCGTCAAAGGCGTCCTTAATGAATAGTAGCtgattttcttttcga aaaattgttctcaGTTATTCgatttttatatttcaaattcagTACAAATC TGCTTAATATTATGTTATCGAGACAAAATACGGATCTCGCTCAACAACTG TATTATTTGTTCGTAGAAATTTAAATATTCGGAAGCTATTCACTCCGTTT CAGGCAATATAAAACTTGCAGATTTTGGCTTGGCACGAGCGTTTGGCATT CCAGTTCGTTCTTACACTCACGAAGTTGTCACCTTGTGGTACCGTGCACC TGAAATTCTCCTTGGTTGCAAAATGTATTCTACTGCAGTCGATGTCTGGA GTATTGGTTGTATCTTCGTTGAAATGGTAATCGATTTTTTGGGATTTCGG GAACCATGATATTTTCAAccactctcgcttattcgaacttctattgtCCT ATTGTTCCAGTCTCCGCCAAGGAAAAAtattctctataattcgaatttct ctgttattcgaacaaataagattcacCACTTGAGTTCGAATTAACGAGAG CCAACTGTACAGCTACCGCATGCGGTACTCTAAAATGttgtaaatttaat ttttggaatatgttttcgtgacttttcatgaattttaattttggacCCAG AGCGGTACACCTTAGAATTAAAATTGTCAGATTTAAAAATGATCCAGAAT TTTTCCAGAAGTTTGTTCAGTATCTAGTCTCAAGCTGCAACAAACTAAAC AAAATTTGGAAGTCTAATCTAGATAATAAGATTAAGGTACAAACCTTCAA AACCTTAATCGAGCCTATTCTCCTTTATGGGTCGNAGGCTACGCAAATTT TCCGACGTAAgtcgaaagatgatgatgatgatgagtctcaagctagacga ctaattcagacatattagaaataaagcaaaaaagtaaattttagtcgtct agaaacctttgtgcactaactccaaacaaNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgtcgtttatacaaact aaatcccgtatcattatttgtgtttattattagtattacatgcattataa acgactccagtctattcAGTATctaaaaaatatcttaaattGTCTTAAAT AATGAAGTAACCCTGGTTGCACATCTTCCACTTTTACCGTTTTCTTATGT GCACTGTTTTTCTTTAGCTCACAAGAAAAGCATTGTTCCCTGGAGACTCA GAGATCGATCAACTCTTCAAAATGTTCAGGTACAATTATGATGAACTAAA ATAGTACAGTAGTTCAATTGCTATCAAATCATTCTCATCATTTATGTGTA TTATTATTATCTGCAAACACGTGTTTCTTCATTTCTAAAGGGACCGCAGT GTAgtgttgtgggttcaacccccagtcgggtcataccaaagattctcaaa aaggtacttgatgcttctctgcttgatgctcagcaattaagagaaggatc aaggggaagttgagcaatccagggagaaagagtggcgctcTCCCCTaccg ggtagatagctatcgaaagaggagccttcgggtcgcctccgactgcggtc gcagacttacctTGACTCATTTCCAGGACTCATCAGTGCAGCTCTGTAAG TGAGCATAGATTGCACTTatagtactttaatgggataaattttcgcggga ttaaatttcgcggttgagctcatccgcgaaattttaagatttcgcgggga ttaattttcgcggatgagggatttcctgatttttcgcggggatttaatNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNcaaatttccaatgggacttat tttcgcggatgacacccaaatccgcgaaatccgcgaaatccatTAAAGTA TATTCCTAAAGTGATTATGGTGACTTATGATTTGGTCCAATAATAAGGTC CAAATCCTTAggtatttcaaataaaagatttttctttgatATACAGAGTA CTTGGTACACCAAACGAGAAACTTTGGCCTGGTGTCACCCAACTGAAAGA CTACAAATCTGATTTTCCGAAATGGAATCCGAAAGATCTCTCCGAAGTTC TACCTGAATTGGACGATGATGGTATTGATCTTTTAAAGGTATAATGCATT TTCGAATAATTCACCGATTGATTTAGTtaagatttcaaatttgaatatat tgaTATCTATTATATTGATATTTatatctttttggacctaccccggtggg gtggaggtcctataaattaacctttgtccgttcgtccgttcgtccgttcg ttcgttagttattagctttcctcgtNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtgtg ttctgaatgattgtttaatggtcacgtcacgtagatatcaattatatatg tgttaaatgcataaccaggtaggtccataaaagtatcacttgtttaactT GCGAAGCACAATGTCCTCTCATTCtgattaaagatttaaaaagatatatt tttttttctcactatTAGATGCTATTGACTTATCAACCATGTCGTCGAGT TTCCGCCCGCAACGCGCTCGATCATTCATACTTTAATGACATTCGTAACA CTGCTGTCTCGTAATACACCTCATTGACGCATGCACAGTTCAATATTTGG ATGTAttcgttgaagatattttacAATGGTAAAGACACGAGAGAGGTTTT GTATTATCGTTGAGAGAAGTTGTGACAAAGAGGTTTGAGAATTTTAACGT TCCgtttctttttggattttaacCGTTAAAGCATGTTGCTTAGCTGTTTG GCTACATTATAAATACTTCATGTTTGTTGTGTTTGAAGCAATAAATGGAC CATATGACATTAAATGTTGGGTAATGAATAATGGCGATTAGTTCATATTT ATCCTATCAAAGATGATTGATTTGAGtgtctaaaatatttttcaaaaaat aaattcaattgTATAAACTTAGAGGGCTTATTTGGGTTTATGGGGAGGAA GAAAACATTGTTCATTGGCACTCGCTTCTTCACAACATATTAATACTACT GACTGGTTTAGCGTTAAGAAATTAGAGATTTTTCAACTAAATGAATATTT GGCACTTGctagaaattgaaaataaacaataaattaGTTGCCATAGGATG TACTATTAATCATATTTCTTACCATTTTTGGCATTTACTTTTGATTAATT CTCGTGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066670TCONS_00066670Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066670-proteinTCONS_00066670-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_458supercontigscaffold_458:154365..165621 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CDK2PREDICTED: cyclin-dependent kinase 2 isoform X1 Homo Sapiens
CDK3cyclin-dependent kinase 3 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
70.44 71.05 150.5 146.85 3.47 3.17 5 4.62 7.56 8.12 5.17 6.25 4.55 5.34 6.63 6.9 9.75 9.63 1.82 1.93 6.06 5.71 18.07 18.96 26.33 25.38 1.94 2.14 8.41 9.69