XLOC_041725 (gene) - C. hemisphaerica

Overview
NameXLOC_041725
Unique NameXLOC_041725
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_459:29811..35707+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041725 ID=XLOC_041725|Name=XLOC_041725|organism=Clytia hemisphaerica|type=gene|length=5897bp|location=Sequence derived from alignment at scaffold_459:29811..35707+ (Clytia hemisphaerica)
ACCAACTCTAAACTTTGATTTCATAAAATCTGCACTGCTGAAGTGATTGA TCGGAAATTTGCAGTGTTGTTGCGTACTAATTCAGGAGAATGTTAGCAAG CGTGCCAGTTTAGACAATTTAGAATTTTTCTCTAGCTTCAAAGTCACATG TCAGCAAATCAATCCTGTCCTCCAACTGGCCTACTAACTCTAAACTTTGA TTTCATAAAATCTGCACTGCTGAAGTGATTGATCAATTTCTATCAAAAGA AAATGTCTTGGAAATAAGTGTCAGTGTAATAAAGTGTATTTTACTAAACT GTCGAAAGGTAAATCATCAAGTTTTCTAtccaatttcataaaaataaacG TCTTTAGAAATAGAAAGACAAGAGCAGAAATATTAGAGAATTTCTTACCG AATTCAATCGATTCAAGTGTTGTTGACGGTTAAAAGTGAGGTGGTCGATG TTAAATCTTGTAGTATTTTCACTGTTTGTGAACGATGATGGTTTGGagcc aatttttgtttttgcggCCTTCTCGTCAAAAGTTCTGGTCTGAATGAAAA GGAACTGGAACCGAACAACCTGCTTCTTCGTGAGGCGGATGTGGCGGAGG GGCGGAGGGGCGGACGGATGTTTTGTATTCATATAGGAACGCAAACTTCT AATTTTTATAGACACGATGGTAATGCTTTACGCACGCCTCGCATGAAAAG TATAAGCAAAAGTTTCGACTCCTTATAGGTAAGcaagttaaaaataaaaa caaactttctcGAAAAGTTCATTGAAAGTTCAAAAAGTCCAttttacaaa caaaaattaCAACCATGAGACAATAGCTTTAACCTtgccaaagaaaacaa aaatatggaGGAAGTTGCACTTGAGACTACTACAGAAGCGAAAACAGACA ATTTGAAAAGAAGACATAGTCATCAGCCTCAGAAAAGAAAGTATCGTATA TCAACTAGAAGAGGACGAAGAAAAACTTGTCCAGAAATATTTTCACCAAA CACTGATAATGATGAGGAGAATGAAGAGGTAGGTACATTGTGATACTTTT CTATATCTTTAAAAGcactaccgtgagatcgggtaacttgcatcagtgga ggataACATGCatgatgcatagccctcaaataaatgaacTGGCTGGTCAT CATTaagatacaaaattaaatcaaaacaaaaatggtagagtagagctgcg agcagagctgcgtagttgtattttaaacTATGGAATAGCTTGGACAAAGG AATTGtaaatttaaaagaaagggATGAATTTAGAAACTCTTTGACTATTA AATAAGTATTATAATCATATATACACTTTTCAATTACTAAGACAAAACAC TTAAGCTTCTGTCTAATTTCCTAATTTCCAGTCATGtctataatagacct tttttcaaagaggcaaccctgttgaataattatgtagtccagccatacaa acaatgatacaacaatgcataattactgtttcatgcatattgtaataatt atgcatgggtgtatcattgtttttctgccggactacataattattcaaca gggtggcctctttaaaaaaaggtctatctacCTCGCAacaaacttttgca aatttttgccttcgTTAAATTCCTAACTACTGTTAGTTTTTCTGGAAATA CTATTTTTAACTTACTATTTAAACttatttatcaattatttattatttac tattttaatattttaaccattatgtacattttaaataaacttaatttgat agacttaaattttttattttcctaaaaattttttgttaaaatatttgcga aagtaattctaatgaatttatgcaaataattatatagaaatagaaataga aatagaaacttaatgaccagccaggtcatttatttgatggctatgcatgt tagccttcactgatacaagttacccgatctcacggtacgaAGGTAtttga aaatcataaaagtcaattttataCAATTTTCATAGCTATTAAAAAACATA ACAATAGACAATAGAGAATAGGgcggctattccatttttaaaccatacag aggtattgacaaacttttccaggggggggggggcggctgggccttgattt tccaaggggttttgattcatttttcagattttccaagggggttattaaag gtttccagggggttctcATATTAAACTGACATCAATAGTCATTTTCcagg ccctttttcacaaaattttacttTCCAAGATGAGGCTGAGGGGTGTCTCA ACCCCTATAGGGGAAATGTATTTTGACTATTGAGTCACAATACACTCTTG ACCGTAACTGGTAGTGACCCAACCCAATCAATACCCCTAGAATCACAGAA TGACAAACATGAAAAGTTGGAAACAATTGTTCATCACGCTCTGAGCATAG ACTTTTTGATGTCATTTATATGTAAGCAGTCATTTTTCTTACAAATCATA CCAtagattgaaaaaagataaaccattttgaaaatgatgccATTTATATG CTAAACTATCAGTCAGTACTTTTAGCCaattaagaagaaaaatattccta aatagaaagaaatatttaaaagtgtAGTATGTATCTCTCCAACAATCTAC ATTCACAAATTCCAAGTATGACCAATAGATTCCATATCCCAAATGAGata actgtgcaaaaaattggaaactttTATTCGCGGATGGTGGAATTATGAAT GccccaaaaaaataattccaaattacCGTATGAATTTTCTATCTGTAAGG CCTCACTTACACCTAAATATCTTTTTCAAGTAACATATAGAAagggctta aaaaacgcataaTTCACATGCGTTTTCCAGCGGAATAAGTAAAGTTTTTT CTACGAATTATAGCTCGGTCCCCCGAGCAATTCAAGAGCTCAATCTTTCT TTCCCATCTAAATGGAATGGTAAGAATCTTATGAAGTACTTTTTAATGtg caattttttctatttttggagaaaatctagGTATATTTATATCTATATAT CTAGGTATTATTAAATCTAGGTATATTCCTAAGGAATATTGGTAAAAGTA AGAGATATAttcctaatttggctaaaggtacTGGCTGACTATGCAAATCT GTTTCAGCAATCTATGATTTGTACGAAAAATGGCTGCTTGACATCAAtgg caaaaaggtctattttagcGAAATCTGGTAAAGCCAACCCCAGATTTGAG GGGGTTTCACAGAGAGGAATCATCCCTTTTTAAATGGATTGACAGAATTT GATGTAAATTTCAACAGAATTTTGGAAATTGGGTCCTCTGTCGTACAGTA GaaagaaaattcacaaaaaatatACCTTTTTGAAATATACATTTATATAC ATTCCAGTAttgaacttctttttttttaatttctagaAAGCACTTCAATA TCAGAAACTAGCTGATGAACATTTTATGCTTGGCAATCATGATACTGCAT CTTCATATTATTCTGCACTGCTAGACAGAGACTTTCGTAAATCTTTTAAT AACAATCAAGCTGAAATTGACCTGAATAATAATGATGTGTTcacaaatga agaagaaaaggatAGGTTGGAACTTTATTCATGGTTTAACTACTCTAATA GGTCCTGAATAAACATCTCCCCTCTGCTCCCCTTGGTTATTGATTTTTTG GAGCCCGTTCTTATTAGGGccgttgtttatttatttttgaaaatattttc agctatttTTCTACATAGCCTGGTTTTAGTCTATGACTACCTTATTTGGg agttttaaatttcaattccCAGACAATAAGGTCCCCTCTGACCCCTACTA TTTGAGACCTTAGAGTactctttttattttatacatTGTGGTTTCTTTCA TGGTAATTAGGTGAACAATTTTTCTTCTGTGATGGAACTATTATgacttt tgaatttcaatttggttgttttatatgtttttttttgttcatatataaaa tgaaaccaaattaaatttaaattgctAAATGTGTAAtaatatgttttctt ttttagaagtTGGGCAATAGAATATTTGgatttgaaaatcattgaagTAA ATGAGGTAtagtaattttttaaatctgtATTATTAAAGTTtagctttctt cttttcaaaactgaaaagttcttgacattttatttttcttataatccCAT TTAAACttgtaaactttttttaatcacTTGGTATAACTACAAAATATGAT TCATACACGAACTACCACCAAAAGACAAATATGATCATTTTaactttcct ttcttttttgcttatttctGCAGAAAATATCTATCTCACCTACTGATCCT GAAGGCTACCTAGAAAAAGCTGCTGTCTTCTTTTTCCGAGATAGATGGCA GGAAGCAAGGTatcaaaattattattttctttttcttttttgtaaataCA TCCCTtgtgtattttaaaatttaaaatgaccTGGTTgtgatttttgttta ttatacTCTTACGagtttctaaatttgaaaaaaacagtGAACATTCATTT TTTGTGTTTCTTTGTACACATGAATGATTGATCTTTCTTCATTGATATTT TTTAGAGAGGTTCTTGATGCCGGATTGCTGAAATGCACCAAAAAAGCCCT AATAAAGTAAGTTAGaactagtttagacggccgactttctgccctgccta ttctaattattAAAGTAAGCAGAAAGTGGGcacagttaaaatctttgcgt gaaaaagattgaaagaagacattgcattgacgtcaaaagagggcaatgca ttgactttagacagcccactttatgcccactttaattcacaattagaata gccAGGGCGAAAAgggggccgtctaaactagagcttagttATACCTTATG AAATGGTCGCTACCAGTTTCGAGTcaagattttattttccttAACACCAT TCTAAGATAAACCCAATGgattaaaaaatcattgaattcgACTCTTTCAG TTTTTGGTTTCACAAAATACCAAATCAAAAGGAATGACAACTAATTACTT GATTTCGCTTTATTCAGAACGACATTGGGCAATTTGAACAAACTGGAAAA GGCATacgaaaaatattgcaaatgaTATGTTAATGTCGAGATTATCTTGA GATATTGTTGATATATTCAAATATTGTGATAATGAACTTCTTTTATGGGC TTCATTACATTGTATACGCTAGTAAAGTGCTAACTAGCACGTGCATGCTA AGACATTCTTTTTGAGAAACATGGAATGTAAACAAAGTTCAGAGTTAGTT AGTGTCCGAAAAGGTGAAAccaatttgacaaaaattaaaatcactGAATC GTTGAAAGAGACTCTTTGTCCAAATCAATAGATAATTCAAGGCAATCCAA CACATGTTTTGAGTAAGTGTTGCCTAAATTTTTCTTATCACAATTCTGCT GTTTTATTGGTCACGCTGAAATTGATTTTAAGTAAATATTGTGAATTTGA AATTCTTCTTAcgttcaatttcaatttctgtgTTTTCTCAAAATGTGTAA ATTGAAGGGTAACTAATTTTTACCGGAAGATATTTTTATGAAGATATGTG TGGTATATGAAAGTTATTAGCTTTCAAATCTTTTAGGgtttaataatttt atttttttaagtttttgtttgTGGTTTAGTTAAATATGAATTCGGAATTC AGTTGGTAAtattatcatattttttttaataatcttgaaaatatttattt tatgatttctGTAGTTAGTTTCGAATATAAGATGTGTAAATAAGGATAAC GGTttagtttttttgtttcatatatatttttacgatttttatttcaaatt ttctatccgGTATTATCTTTTCTAAAATGCAGATTCTTTTCTAATAATga tgagatttttttcattttcaaaaacattataatATTTAGCGGTGACG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066719TCONS_00066719Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066719-proteinTCONS_00066719-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_459supercontigscaffold_459:29811..35707 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
14.15 13.76 13.7 12.64 14.53 13.59 15.65 16.2 25.12 22.21 21.73 18.98 12.84 12 13.37 16.26 16.96 21.24 6.58 8.28 18 17.53 23.69 23.85 13.25 13.9 25.1 19.54 17.57 17.28