XLOC_041733 (gene) - C. hemisphaerica

Overview
NameXLOC_041733
Unique NameXLOC_041733
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_459:144727..148763-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041733 ID=XLOC_041733|Name=XLOC_041733|organism=Clytia hemisphaerica|type=gene|length=4037bp|location=Sequence derived from alignment at scaffold_459:144727..148763- (Clytia hemisphaerica)
GGAAAAGTGACAAGAATCTTAGTGTGGAAACTTATAAGAAATAACAGTAC TCTTTAGGTGCCTTTATAAATGCCCCCTGCTTGTTAATTTTTCAATCTTT TTCCTACCCCCTGGACCTTATTTTGACCCAACATTTATTAATTTTTGAAG AGTCCCTTACAGTATTTTGCTCAACTACCTTACTTTAGGGGTATTAGAAG TATGATTTCCAACCTTTTTGGATGACCATCAATAATATGTTCCATTTGAT TCATAAAACATCTTCAAATTCAGTCATTCAGTTGACCGGTACTGTCAATT GGGGTTACTTTCATAAGTGAGAGGTAACTTTCACCCGTTGCAGATCACAA TATTTTCTGGTCCTCAATTTATAAAATTCAATAAAATTCACGACATAATT TGTGATTTGTTTGATTTCATTTGTTAAAGATTGTCTACAAAAGTAAGAAA TGAGCAAAACAATAACCATAAATGAAAAACTTGAGAAAGCTGGAGAAGAG AAAGAATTAGGAAATGGCTTTTTCAAAGAGGGGAATCTTCGTAAAGCTAT CAAAAAATACCATATCGCGTTGATGTATATCAAGGATTTGGAGAAACCAA GCCCATTTGATAAATTGGCTGGAATTGAGCCGAAAAAGGTCACAGATAGT GAACTTCATGGAATTAAATCATTAAGAAGTGTTTGTTATAATAATCTGTC AGGTAATATATAAAAAATATTTATTGTGAATTCAAGTTTGTAAATTTGTA ATAGTTATCGGACAGTTGCGAGTACAATATGAGAAATATTTTACGAGTTC CGAGATTTTTCCGTACAATATTTTCNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACATCTTTTCGT CAATTTATATTTTTACATGTAAAATACAAGATATATTGTACTCTTTTTAA CCAATCAGATTGCAGATATTTTTTGGATCGCCAATAAAATGCTATACTGT AGAAGGAAGTGAGATTACATCTTGTTTGTCACCAACAAAATTTTAAAATA TGTTGATCTGCAGAATTTTTAAGCTTATTAACCCTTTAAGTGCCACAGTC ATTTTTTTCTAATTTTTTTAAAGAAAATCGCTAGTTCAAACTTTAAAGGC TTATATCTCCGGATCTAGAAGGAGTTAGAAGCCCGTTTTTATAGTCTGTT GGATAGCTTAGAGTCTACTCTTTCTTTTAGGCGCCTTTGGCGCCGCCCGA TTTAAGAAGGGCGGGCTGGGCGGCGGCTGCACAGACCTGACTGAATGATA GAAAGGTGCCGAGTGGTAAAACTTTAAACTAATTCGCTGGAGGACAGAAT CAAGTTAATCAGGGCCAAATTTGGAGGTTCTAGGATCACTCGTTGACCAA AAATGGTCAAAAAACGGTCAAAATCTTAAAAAAGTGGATTTTTGTCAAAT TTTTGCATTTTTTTGACTTTTTAGCTTAAAATCTTGCTGAAAAGACTCAC TTTTGATTTTTTTTTGCTTGGCCATGAAGCCCAATGCAATCCGATTCCTA CAAGTTAGACCAAAAATGACGATTTTCTAACTCAAACTGGGCCCTCCTAC ATAGCCAATGTCTGATATATACGACATTGGCACTTAAAGGGTTAAGCTTG GGAAAAGTCTTTCAACTGTCTACTACACTGAAATTACCTTTAAGAATTGA GGAATAATAGATTGAAAAATGGGCAATCAATCGTAGTAAAATACGGTATT TTTCTGACCAAAAAAGTATAATTCATGTATTTCAAATTGTTCCAGCTATA CTCGGTACCGTTTTCTGCAAGGAAAATTGCATATTCCCTTTATATTTTAC TAAACATACTTATTATATTAGGATACTGATAGACACAATAGGTGTCAGAA ATTCATCTAACCTCACCAGAGGTTCTGATTTAGGTTTATTTTATTTAGAA ATTTGTTATATTAGATATAAGTGGTCTTTATTTTAGACTGTTCTTTTTTC AGCATGTCTTTTAAAATCTGAAGAATACCAGAAAGTCATTGAATACACTA CCAAGGTTTGCCAACTATGTTTATCTCTTTATACATTCACCTTGTCATTT GACACCTCTCCCTCCAATCGTTTTTGACCGACTAAAACTTGGAACGACTA AATGACATTGAACACTCTCTTGTCAGTGAATGGCTTAGAGCGATGTTATA CTATGGAAATTATAATGGAAAAAGTAAATTTAGGACCCTGTCTGATATCT TCAGAACCTAAAAAGGGATCCTGGCCAATGGCACGTCCCCCGGACCCTTT TTTGCCTAAGTGCCCCCGTGGAATTATATAATCTATTTGCGATATGGAAA GGAACCTAAGGGAAATAACTTTGTTCCTGCTGCTTGAAGATAGATGCCTA AAAAATAAAAAGCCTATAAGCCATATGGCTGCGATTTCGCTATTCAATTT TTTTGAATTATTGTTATTCGAATTTCGTCTTCTGTGCTTTAGGCTTTGGA GTATGACCAAAGTAACATCAAATCGCTTTATCGACGTGGTCAAGCTCATT TCCATACTAAAGATTTCGATAAATCAGAAAAAGACTTTCTACACATCAAA TCGATAGACCCAAAAGGTATATAATTGTCCTGTTGGATATGGTTGATGAT TTTGTGCAATAAACTCTCACCACGATAACGTCAGTTTACCTTCGAAAGGT TATTGTTTTGTTACATATATACCTTTTGTTTAACAAACATTATCGTGGGG AGAAGTTTTTATTCCTACCAATTTTAAATTCAACCCTCTCAGGTTATTAT CAGGCAATAATCGTTTTCCTGTTTGTAAAATCTGCAAACTTCTTTAACCT CTCGGGATTTATTGATACCACAGTCTCATTTGCTTTTTTAAAAACGATTT TTGTTTAGCGTTGATTTTTATTTTGTTTCAGAGACATGTTACAATCCGTT TATGAAAAAGATTGAAGCGAATAAGAAAGTGAGAACGGTCAACGAGAAAG AAATGTATCGAAAAATGATGGATGGTTGATGCAAAATCATGACTCAGCTT TTAAAGATGGTGGAGTTTTTGGGCGGTTGTTGAATAGGCAGGGTTCATCG AATTGATTCACTGTCGTTAATATCGGGATATTTTACCGCAGTACAGCTCT TTTTCATTTGACAAATTTGAGAGACGTTTATTCAACCTTTCAAGAGATTG TTCGGATTTTTTAAAACTTGTTTCTGATGAGTAATTAAATTAGTGTTGTT CATTTTGAAACTTTCACAATAAGGAATATTTTTTACT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066736TCONS_00066736Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066736-proteinTCONS_00066736-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_459supercontigscaffold_459:144727..148763 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TTC9CPREDICTED: tetratricopeptide repeat protein 9C isoform X2 Homo Sapiens
TTC9tetratricopeptide repeat protein 9A Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.47 21.61 17.54 17.77 4.43 3.39 5.87 6.28 6.03 6.24 4.59 3.91 4.19 5.04 4.97 6.36 5.04 6.36 4.3 3.58 5.48 4.89 14.27 11.28 24.02 25.48 2.99 2.68 7.02 6.96