XLOC_041756 (gene) - C. hemisphaerica

Overview
NameXLOC_041756
Unique NameXLOC_041756
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_46:360412..370319+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041756 ID=XLOC_041756|Name=XLOC_041756|organism=Clytia hemisphaerica|type=gene|length=9908bp|location=Sequence derived from alignment at scaffold_46:360412..370319+ (Clytia hemisphaerica)
AAGATGACGATTTGTTGTGACACTTCCGCCCAATTCTCTTCACAAGCACT GTTCTTCACTTTCTCCAACAAGGGCGTCAAATTCAAGAGACGCCACAAAC GCTCTGAAGGTATGCTATTTACTTTGATACCAATATCGACCGCCCGTTGA TGAATAGTACGATTCGGGCGTTGcgtattttcaagcctttctaACTGTTT AAGCCATTTGGTAGTCGGGTGTATAATACGTAGGCCAACACCGGGGGTTA GTTGCTCCAAGACGTAGTATCGTAGCCAATAAGGCAGTTCTAGAACAACC TTATTAGCGAAAAAGATACTCAATGAATAACACAATGTTGCGATTAATAT GACCAGAGTTGAAAGGGTTAAAGCCAAGAAATAGGAGAAGAAAGGGATCT CTCCAGCACTTCCAGGAATCATTTTCAATACTTTGGTTTGGAAGAAAGCT AAAGCCAGAATCAGATGACAGACCATGATGACACGTTGACCTGTCGATAG AGAAAAGAAAACGTATGGTTTAGCTCTTCAACATGATTGTACAGTATTAG ACAAAACGATGAGAATTTGGTTGGCTTTAAGGCATTGCAGTTTAAATTCG ATAAATTGGTTCTTTTGTTATAACCTTTGTTGAGAAACCATGACCATgag aatagatcttatcggagtttttgatttttctaAAAAAGCGATGCATTGTG GGATTGTtttgggagtattacaatagaaatctcttaggaattcctcgagg gaattctattgtaatactcccgaaacaatcccacaatgcatcgttttttt agaaaaatcaaaaactccgacaGGGACCCATTCTAAATACTCTGAAAGGG AATCTCTTCTTCTCCTCTTTCTTCTTATATGGaaagtgtttgttttgatt tcaaaatctcATCTTACGTGAAGCTGCCGGAACGAAGTAAACCAAAATAC TGAGAAATGATAAACCGACATTTGGTAAAATCAATgcagaaattaaaaac attgGTTTTCGTTTCACGTTGAGATGGCACACTACAGTTGAGAATTCTTG TTGGTGATTATCGGGTTGGTCATTATCAGTCCTTGCATTTGTTCGGTTGG TTTCGTTGAAACATCTGTTGGAGGTTAAAAGCCATTGTGGATGGTCTAGA AAATGTGCAAAATATTGAATACAAGGCAGTCTTGATATATTTCACTCACA GCTCTTGTTCAAAAATTGTATGAAGCTTACTATATGAACTTTTTGAGAAA GGATTCGACCTTCCGTCTGCAATAGCTACACTTTCACCGGTAGCCTCTTA TCACTATGCCGAAAACCCAACACCTAGATTATATGTGTACATCTCATTAT GAACCATTCGAGAGGTTATAAGCAGATTTGACACTGACCTTTACACAATG GTTATTACCGATACAGATCGACTGGAACGATATCAATCTTCCTTGGTCAT TTTGGttagtttctgcgtagctagccggggtatttaaaaggctggaacac cggattcttccagtcttttatacaaactaaatcccgtaacaataattgta ttatcattataacgcctatactactgtattacacgcattatgaaCAACTC CAGTCTAATAGAAAAAAAGTCTTTCAGATTTGTATCATTATATCAAGTAG CAAGCAAAGAACAAATATTCTAACGTAACTTAAAGAACAAATTACAAAAT TCATTTTGTAGACATATGTCATCTCTACAGGAAATTTCAATTAACTAGTG AGCAACTATAAGCTTTATAAAAGAACCAAAAAATGACTGTCGCTAATATA GAGCAGTTGATGTATAATGTCACTTGATCTAGTGCCTTAGCAACCAGTAA CCAATCATCTTTCAATATCCGTTTTCTCTCTTCCTCCTTTAACCAATCAA GTATCAGGGATAATTTCTGGGATAAAAGGCATAAATTTAATGACGAGAGT GAATGACCTTGCGATAAATCATCTACAATCTCTATAACATTCGACCGTAA TTCAGTAGCTCCCCACAAACGTCCTGGGTGTCTTTTACCGAGAATTGAAT TTATTGGATTCTGTTGTTGGTTTCTCTGGCAATGTTCTTCAATAGCCATT AACTTGATCATCCATTTGGGAGTTGTATAACGATCTCGATAACCCATACT TGGTGCTAGATGATCTAAAACGTAATATCGTAACCAGCGAGGCATTTCCA AGACAGTACAATTAGCAAAGTAGATACTTAAAGTATAGACCATGGTGACT ATATTGGTCACCATCCCAATCAATGTCAAGAGAAGAAAGTACGTAAAGAA AGGAACCTCTCCAGCAGCGCCGGGGATGATATCCATAACATTGGTCAAAA ATAAAGCCAATACTAACATCAAATCAATCAACATCAGAATTCGTTCGCCT ATTGATGAAAAGAAATTACAGATTCGCAATAGTTTTCTTTTGAGTAGACT TCCCTAATTTCAAGAGCGTGTATATGGAATAATGTCAAATAAAATATACT TGTTTATGAGCCGACATTATCGTCCCAATTGTTGGCATTTTATTTCTTAT TAGATGAATGTAAGAATTAGATATTAAATTGGGAATTTAAGTTTAAGTAT ATGAGCTcaggaaaaatcaaactcgCACAAATAGTAAAGTTTTACTTAGA ATTGACAGGGAAAAGTTTATTCTACATTTTGATTTGTATGGGACAAAGAG TGACAATTTCTTACCAGATGCCGCCGGGATAACATGAGCGAGGAGACTGA TCAGAGTGATTCCAAATTTGGGCATGATTAATGACGTAATGAGAAATAAT GGCTTTCGTTTGATTCGAACAACATAAATGATTTCTGAGAATTTGTTCAT GTCCggatttttgaagttcatttcGTTCCGTCCGTTCGCAGATAGGATAT TCCATTCGGAATGATCTGTAAAATATTGAACTATGCTATATTGATAATGT CAGTGATCTTGTGAATTATTAAAATACATTGCTATAAATCATTTAGTCGC CAAAGGGAACTAGGAGCCGTTCGTGGTTACGGAGAGGAAAAATAGGCTGA AATTATTAAAAGGCACCGAAAAATCCGTTTCAGTTATATCGAAACTTTCT GAAtatcaggcccggcggaacaactgtaaaagtgggaaggctgaaggctc aaaatgagataaaattcgatAGGAATTGTGAGTCTGAAATTTCTCCACTT CCGCCGGGCCTGGATATAGAGACAGCTTTAAGAGTGTCGATAATTTTGGA GTTTTTTATCTGCCTCGTGTCTTGTTCCAAACGTTTTTCGTTATGACTAA ATATAGAGGCCATCCTTTTTTGCATGGAGACGGAGGTGTAACGACAAACT TTTTAGCATGCGGTACAAAACAAATATCAAAGCCACATTGAAggtgaaaa agaaatgaaactAATTTAGTTTTACATACATTAATTTGAAAATCTAGTGA GTGAGAGTGTACCTGTGTTTTTTTTGGATTGCCAAGTGCTTTTATATATT CAATGATGGGTGTTTATGGTGTTCTGCTTTGGTGCGTTGAATGGTGAATA AATGTTTCTTTTCAGTGACAGTAATTgcatttcttataaaatttttctac aTAGAGATACTCTATGGAGGCTGATCCATATCAAGCTGTATATCCTTACT GAAGTAAACCAAATTATGACGTCGTTAGTACAAGCTTTGAAATTAGCCTG TGTCAGACAATTTTATTACCACTGCAGTCTATGACAACAATGATTTGTTT TTACTGggctttcattttaaaaacaaaatattttgcaattttgccgaaat ttgccTAGGATTGCTTAGACTGTCAATAGTATGTTCAAAAATACATATCT ATGATTCTCGTCCTACCTGCTAATAATCAGTGTCGTGATATTAATAATAA TTGTGAAATACTGAAGATTGCAAGTTACCTTAATGGAACttatttggcgg gaactaattttagcgaattcggcgaatttagacaaaattcgccaaaatta tttcccgccaaaattaaatattttgctcattcgccaaaataagttctcgc caaaattagaaattttcaggatttttgccgctcatcaaaattagttcccg ccaaaaaaagttccctttaggtagttctttatttctctatatttcgctcg atttttttcgaATGTTCTTGAGTAATTTCTGATTCTATCTACTTCACTGT AACAATAACTGTGTTAGattgaattttgaagaaaacaatTATGATACTTA CTGTGGAACATGGACAAGTCCAGAAAAGGAGCTTCTGATTTCACAATCAA TTTCTTCGAGTCTAGTGTCATGCTCCCTAGCCTGATATCGCATTGTTGAA TGTCGAACGGATAATCGATGACGTGTAACGGACAATTCGTTTCCGATCTA AACGGCGCTAACCACATGTGACGGCCGTCATGGCGTAAAGAGATTAACGT ATTTGCCACGTTCAAATAACTACCGTGAATCTTTTCCTCGCCACGACTAA AATAGAATTTCGGTTAGTGGGATATTGTATTAGTATAttactttaaaatt ttggaatGATGACTTCGTTTTAGGTAGAGAAACCACTATGATATTGCCGG TAGAAGGCTTATCCCGATCTTACACCTAAAAGCTgcaaataacgttgtgt gccagctaggtCATGGAATTGCAATCGTTCGAAGAAGGTAGTGTCGTTTA TAAAGAGTGTTTGAACCCTCAATTGAGGGAGCAGTAGAAGCCTATTCAAT GAGAAAAAAAGGTCATATAAAGGATTTGAGTTGACTGTAACGGAAGATTT ACCTGTCATAAATATAGATATCAGGTGACCAAACTAATTTCGGATTGACA TTGATCTCAGAAATGTTTTCATATTCTTCAGGGTCCCAAGTCAGTTTCTT GTTCCACCAAATCTGAGAAAAAATTCTGcactacagttgacgctttaTAA TTGTCGCCAAATAAAAGagcgtatcaaatagtagagcgtcctttatgaga gtttcttgttgatggtgACTCTCAATATTAATGCAATATAATGACCAGTt tgtgagggctgtactgagaaatattgcccgaggtcaagtaacggcCAAGC TTGCTAGGCAATAATGCGTAATTATTTGAGACAAAATGATGTCAATGcag tgttcattttcctttgaaaaaactgACGTCGCAATGAATTTTTCTAACAA CGGGTAACTATGTGctgtgtaggcccgtcgtcatgcgcaATAAACCAATT GCATTGCACAAAAGGCCTTGTAGCCCGCTTCGagaaagtaaccggttaac aatatcgaataatggagtgtATAGATCAGTAACGTCGAATTAGAAAATGT CAACTGTAATTCAGtttgaatttagaaaatgagaTCAGAGTTACCACCAT GATACAAGAACCTAAAATGGTAATCTTACCTGTCGATAGTACATTCGGAG GGTGAGTATGCCATTTAACTCATGGAATTCCTCAATCTGAACCAAAGACA TCCCGATTCGGACAGTAATGGAACTGGTTTCGTCCGGAAATGAAAACATT GTACATTCACGTGAGAATTTGTTCTTTGTCAGCTCGAGAGAACAATTTCC AAATAACTTTTTATGGAGCTCGCTTTCTGCAGAGATTTTTAGTTGCGTTA CGTTTGTAGTGGAGTTGTTTTTCTCCAGTATTGCGAAGATGTCAtctaaa taagaaaaaaagcaaTTCTGTAATTTCGAATAAATACTTCTACCAACCCT TTACCTCGAAGGGGGTTCGAGTTTACAAGATATTTTATCGGCGGTATAAT GAAGGTGCATCTTCCAGCTATGGTGTGTAAAGTTGTTGAAAAGttgaaag gagtggcgccctcctctACATTCGGCTAGCTAGCTATCGAAAGAAGAGCC TTCGGATCACCCTCGACTGCGGTTGCAAACTTACTAAATTAAAAGATGTT AATCGACTGTCTTTGTGAACGTGTCAATACAATGTATTGGCTTCCACATT TTATTCAGCTCGAACTCAACTCCCATTCGTGTATTTTTTAACGCAGGGGT ATACGCAGTAAGTCATAACAGAAGGCTAAAGATGAATATCATTACGATTT GAAGCACTGCAAAAGTTGTGCTGTCCCCTCGATTTTTATACAAACGCTAG ATTCGTCATCCGAAATAAGgcgaaaattttaaggcttctctttttcttgc tttggaAAGGCTGACGATTTGCTTCTAGCACTTCGGGTTCAAACTCAATG AATAGACTTATATTAAGTATACTCCATGGTATCGAAAGCATCTTCGAAAT CAATATTGACAACTTATCACATATCATATCTGGTGGGATCATCTTGCTAA GATAAAGAGGCGTATCAGTCTGTATTTAACAAAACTCGTATTATAGAGAG CATTAGAAATATAAAAGTCCCGAAAGTTTTATGTTTGAGAAGAAACACCC CTACTCAAATCCTCCTCTTCAAACTGAAGTAGTTTTTGCCAGTACTTTCT CTGGCGCAACTTAAATCCAATGGATATCCAACATAATTTGCCGATTTCGC TTTATCTTTCTACAAGACGTGATTGACATAATAATTAAATTCTAAATTAC TTGGGTAATTATCCCGGCGACAATCATTTATTTCCTTTCTCgtaaaatta ttttctctgTGGTGCACCGAAAACTATTTTTGAATCAAACGGAGGCTCTT TCCCAAGGAAACTGTAAACGGATATACACGTTTTTTTTTTATAAGGAACA TGTTTATAAGGAACTCGAGGCTGaaaatggttcaaaaaataaggaattgt taaggaactgctcaggctgagaataagtggatttgaaaataatgtacctt attgggactaatttaaccaaattttgatctttcaaggggcaaaaagttca aaatttcctatgtagtaaggaaatcgataaggaactttgagactgaaatt ctctgtaaaaataagaaactccaggctcagagcaaagttaaggttcctta taaaaaaaaaaacgtgtatgagtAGAAATTATATATTTACGATACAGGGT AACTTAGGGGTCAAATAATGGCCATGATAAGGTCACatttaggctacgtc atatcttccttcgtttcgagcgtaaaactcttACTCTtcgagtaaggcct aaaagcctggatctgtctattttGTAGACTAGGTCACATTTTGATTAATG GAGAAAATGTCCCTGTTACATCAAATTTATGATCGATTTCTGCGTTCTGG GTTTAgtatattttgtctttttatgtcTGAAAATTCATGTTTTTTATGAG CTTTATTTTTAGTCATCCGACTAGAATTTTGATAACAGGCACTACTCAGG TATTATAAAACCATTTTTTAATCAGTCTTGACTTTAATCCTTCTCTTAAT GCCCTGCAGGAAACTTTAATGTTGTGTCTTTAAAATCAGTTTAACACAAC CTGCAAATTGATCAACCCAAGCGCATGCGCAGGATATACATCGACAAAAG CAGAAAAGATTAATACAGTCTAattagattttcttttcaatcaatttagc ttttcaacaaaaaagtgCTGCGGAAATGGGAAATTAATTTCATACCGCGA TATATGTGCATCAAAgagtcttttttgacgtttgaCTATCAGGTATTTTT GCCACATCCCTTTTCTCTTGTAATGTATAGTTTGTGTGTTTTTAAATCGA TTTATCAAGTTTTTTCGACAAAGATGTGCAAGGTTTCTTATTGTGGTTCT TGAAAACATTAACTTGTATTCAGAAGTCTGAAAAGTTTGGTGAATTGGGG TTGTTTTTCGCTTTGTTTTGGATCTTTATCAATCATGATATGTTAATGAA ATGGGGTGACTGTTGCGTTGTCACTACTATATCCTGTGCTGGATCAACAA CGGTGTGATTCCCGATTATGTCACAAACGTCTTCTCTAACGTCAGATTCA TCGATTGGAAATTTTCAGCGTTTTAGACTGGTTGCCACACGCTACCCTTT TGTAAGCATTGTGTGACCTCGACGATCTAACCGAACTCGTTTAAACCCTG TTCGTTTTGCCCTTCTAACAatattaattctttttttttcaggtataagT ATAACAAACAGAATATGACAAAATGGTTCGAAGCGGACGAACTTTAGAGC AAGTATTAAACGATCTTGGTGTCTCTGTTACCCAAATCTTCAAGCTATGC ATTCTTCTAGCACTTGTCATAACATGCTGGCTTATCGAGGCAAACTTTAT GGATATCTCATACACGGAGTTTCAATGCAAGCACAAGTTTTCATCTTTAG AGATTACAATCATTCGATGTGTTTTGATAATTACTATGGCAACAGGTAGC CTTGTTTTCGGGCTAATAGCAGACATCAAGGGTCGAGTTTTGACGATGAA GTTCACCTTATTCCTTTATATCTATTTTCGTTTGATATCCATAGCAGCCG GTGATATATTATGGGAAGACCTGGCAACAAAGATTATCATTGTTTTCACG TGTGGCGGATTTATGACAATTTCCCTCGTTCATTTCATAGAGTCACTTCC CTCGAAAACAAGGAGTAGATATTTGCTACTATCCGTAGCCTTTGGACTCT TCATCGGAACAATGCTCATATATTTAAAACCGTGGATCAAAATACCATTT TTCAGACATTTAATTCTACTTTTACCTGGTCTCCTCGTTCTGGTCCTTCT TTTAACCACCGGTGAAGAGAGTATCCGTTATTTGAACAGTACCGGTGATT TCGATCAAGTGGTGAAAAAACTGAACCAATTATCTGATGACAGTCGCCAA AGTTTGCCAGAAAAGATCACCATGAAttataaaaacttcatttttggtag tTTGAGATTCATGTTTAGAAAGCGTCCAGAGAATGTCATCATTGTATCCC TGTTATTAGGCTTGGTATTGACCATAGCTTCGACTACTCGCCAGATCTAT GCATTAATGTTACTCCCAGGACTCAGTACATTTCATATCACCATAGCAAT AAACAATACATTGACACCATATTGCCAAATCACAGACGTCGAAGAACAAT TACCCGCTTTTTTCCGTCCTTTGTCCGCCCTTTGCGTCGTTGTTTTTCTT ATCCTTGCCGCCCTAAGCGTTTCAACTTGCGGGACAAGAGGTGTATTCAG ACTACAAGTTTTGGTGTCGATGATATTCCTTATAACCTTGTGCACACATT ACAACGAACTCGCAAGTAATATTATACTCTATCTTACAAGTTTATTAGCA TACGTTTGCCCATGGACATTGTATTTATATATCAGTGAACTGTTACCAAC ACACTACCGTGGAGTAGGACTGGGATTTCTGATGCTCAATGGTAATATGT TGATGGTGATACTGACTCTCTTGTTATGGAATATTGTGATCTTGAGTTAT AAAATGCTGATGATTTTAATGGCCACTTTTGCCGCATTGTCTCTCATCTT GGGTTTGTTACTCccaaataataaattttatattAATAGCAGGgtcattt aatttttaaatagGTGATTTTATACATGTTTTTGTTACACGGTTACTTAA ATTTACCTAGTTTAACTAAATTTTAATCTCTTTGTAAATTATTGGAAATA Cgccttttcaaccgtagccgccaattgccgcactggctttttttgtccat tttaccaccctaaaaccgtcccagtcctttcaCACCTATAGACAACagaa aaaggtttcaaaaaaggattggattgagtttaggaggatgattaaataat taagtggcacgcgcctgaccgcgcgactacggtcgaataGGTGAATTCAA ATTTATAGTCTTAAGTTAGTATTTTGGGAGAAAGACACAGCCTTAGTACA CCCTCACCTTAAGTCTAAGTACGTCCAAACACATCTGCGTTGACTGGTAG CCTCGCTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066771TCONS_00066771Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066771-proteinTCONS_00066771-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_46supercontigscaffold_46:360412..370319 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.61 2.5 1.46 1.23 0.67 0.73 5.96 6.31 5.62 6 2.87 3.34 5.98 5.9 3.28 5.81 2.73 2.59 5.76 4.48 1.19 1.23 4.78 3.88 2.5 3.72 4.51 2.18 0.46 0.35