XLOC_041828 (gene) - C. hemisphaerica

Overview
NameXLOC_041828
Unique NameXLOC_041828
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_462:743841..752039+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041828 ID=XLOC_041828|Name=XLOC_041828|organism=Clytia hemisphaerica|type=gene|length=8199bp|location=Sequence derived from alignment at scaffold_462:743841..752039+ (Clytia hemisphaerica)
ttcacgaaAGATTTCTTCCTGATGGTTgaccaaagaaaatttcatcGTAA TTTGACGCTATTAGCGACTAATTAAAAAACGAATTACATAATACATGGCG AAAATTCATGTTTCAAACAAATGGAATATGATAATATAGCTCTGTGGTGA TGTCACGGAATGGGCGGGACTGTTAGAGGGGGAGGAGCTAGCCTTCGTAA AGATAAATGTTCATAATGCAATCTTTCAAATTATAAAGCTGTGAACAATA AATTATCATTGATAAGGTTTGGGCGAAAATGAATGGTCTTAgtgtaaagg cttggggacaagggaagttttttttgcgttggtgcaatgcaacatgctcc atcccaccaacctgaaaggCTTTCTCATGTCTCTATGTTgtattgcacca acgcgaaaaaaacttcccGTGTCTCCAAGCCTTAAGTCCTCTTcacgaaa aagtttttccatcGTTTTGAAACGATTCCCAAGTTGTTTTATCAATTCAG ACCTTTTAAAATCATACCTTTGATCCTTTGATTCAGAATAAATATCTTAG TAATTCCTTCGATCGGGTAATAGAAATCGAAAACAAGGCACGTGCTCCTT GCATGTCAAAAGGaaacaatatttttgaaatagatcttattggagttttt gatttttctaaaaaagccatGCATTGGTGAGATTGTTTCgagagtattac aatagaattccctcgaggaattcctaagagatttctattgtaatactccc aaaacaatcccacaatggaTCGNatttttctaaaaaagcgatgcattgtg agaTTGTTTCGAGAGTATttcaatagaattccctcgaggaattcctaaga gatttctattgtaatactcccaaaacaatcccacaatggatcgctttttt agaaaagtcaaaaactccgataagatctattgggTCATTGGACTGAAGAT ATTTTCTTTATTATCGATCCTtagttaattttcttcttcgacACGCTACT TTGcttcataaaatatttttgcaatttcttttCCATCTTCCTTCCTCAgg aaatcattatttttttcaaactcaaaATGAGAGGTCATTCCGCAAAAGAA GGTTAAAAGGTGTTTGACCAACGCAAAACTCTCAATACtaaattataaaa tataaacGTATCCACAATCTTATCGCCTTAGCTCTCAATAGAGTAAAGAA AACTATATGCTTTACAGTACACTTATACCACAAAGATTAAGACGTACGTA TGTTATGTGATGTAATGTAAGTATATGCTTATTATGGAAATCTCAAGGTA AATGCATCAtctaaatatttacaaaatggaATGTTATAAAATTGCGTTTT AAATGTTCTGAAAATACAggtaaaagaattacaaaatagttgaacgtgcg caccgcactgggctcaacttcagattttcccgttattagaaggcccaatt gtaacatttcaaatatttagtattaggtagcaaatataCTTTGTCCGTNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNAATGATCAATAATTTCGTTTCTTTTCAGTTCAGATTATACT TTATAACCAAATATGAAGTTCTAGCCATTAGGATTATAATAAAGAATctt aaaatcccaatgggaaatTATATTGCTGAAAACTCAAAATCCAATAGTGG TTCCAAAACTGTTTTGTACTGTTTTCTCATAGGAGATGAGATCTTCAAAA TGGGATGAGACTTTAGGTTTCTCCAATAAAGAAAATCTTAAGAGAGCCTT TCCACTGGGGGTGAATTTGACATCAGTTTTGTGAAATTGTTCTAATGTCC TATGAcaatgattctgctgcacaTCGATATGACTATAAGTGAATATACAT GTTGGAAGTCTTATAATAGGTGAGATTTTGTGtccaaatcaaacaatctt gAATATCTCCTCCAAATAAAGTTTTAGTTCTGTCACCTAACTAAATGGTT TACAGTATAATTTTCCCATCCTTTAAATCTTGAAACAATAACTCATCAAA CTCCACATAACTATCTccaaacaaaaagaatattttctcATCATCCATTA AATATTCCAAGTCAAAGCCTTCTTTCTTCAATTGTTCTTTTTGATATTTA AAAGTGCTTGTCACTTGCATTTCATTGCCAACACGAACGAAAACAGGTAG CGCATAAGATGGTAAATTGTGTTTCCAATTATCATTGAAAACTGTATTGA TCATTCTTAAATTTATAGATGGATCATTAATGTACACCATACCAGCTCTG CCTTCGTAACCAGGGATAGCTTGACCGTATACAATGCAATGGGTATAACT TTCAAACGACGACGAAACAATATTCTCGATTTCAACCGTTGATACATTTT CACCTTTCCATCGAAATGTGTCTCCTAAACGATCTAAGAAATATAGATAT CCGAATTGATCAGTCATAAGTAAATCTCCAGTCATAAAATAACTATCACC TGACTGAAAAACGTTACGGGCCACCTTCTTGACGGAATCATTCTTTTGTA CATATCCATAATACGGTTGATTATTATTGATTAGTCCAACCATAGTGCCA GGCTCACCAGGCTCACACTCAATACAGAATCCATTATCGTCTCTGATCAA TTCACCAgtattttgatcaattttaacCAATGTCTTTAGATTCAAAAATG GAAAACATTTGAAGAGAAAACCAACAGCACCATCAGTATTATCATCGTTA ATGAAACCAACGTTAGATTCAGTTGCACCATAAAACTCATAAATGTGCTC AATATTGAATCTAGATCTGAGCTGAGTGAACAAGGATCTTCGTAAACCAT TACCTACAATCTTTTTAATATGGTGCTGGCGATCAATCTCTTTCTCTGGT TGCGCTAAAAGATATCTCATCATTTCGCCAATATAACCAACATAGGTTAC ATTGTATTTCCTACAATCTTCAAGGAACTTTGATGCGCTGAACTTCTTTC TAAACACCATAGTAGAGCCACAAAGGATGGTTCCAGCAAAGAATATTAAA CTACCGCTGGTATGATACATTGGTAATGTGTTGTAAACAATATCATTGGT GTCAATACTGGTTAAGTATCTGAAGATGAGATAACCTGCAGTGAACTTCT TGCGTGCCATCACTGCTGGCTTTGGATGTCCCGTTGTGCCAGAGGTGAAA ACATAGGCTACTGGATAGTCAGGAGAAATGCCATAGTCTATTTGAGGAAG GTCAGAAGAGACATTCTTTAGCAGCAATTCAAGATTATTTTTACTATTCG ATTTTTCaccaaaagtaaaaaataatttacctgAGTCATTGTCAACAAGG TTTAAATTACGCAAGGTTTCTTCCAAATCAGTATGGTAAATGATGGCTTT AAATTCCATAACATTTAAGGAATGTTTTAATGTTTCACCCACTTGGTTGA TGTTTATGAATGCTGCGCTAACACCAATACTTGATAAGCCAAGATACATT GGAATATACTCGATTTGGTTAGGCAACATTATTGCAACATTGTCTCCTTT AGTAAAACCATTTGCTTGAAAGAAATTAGCAATTTTGTGAGTGAGCTTTA AGAATTCATTGAATGTTAAGCTCTGGTCAGTTTCAGCATCAATGATGGCA ATTTTGTCAGGATACTTTTTGGCAATGTTGGCAAATAATTCACACAAAGG TTTTCTTTGTAGTTTCTTCAAGTTAATCACCATCCGAATGATTTTGGACA GAAATTTCAATTCTCTTGGCAAGCAATAAATCATTACTGGTAACCTCTGG TAATTTGTGATCAATAGCAATGTCATGGTCGTTAATATTGTATTCGTGAA ACCAAATATTGAAGTTAAAATAGCAATTACGCTGAGTATCAACATCATTT TTATAGaaaccatttttttcttttgttgcaAAAGATATCTTGTGTGAGCA CACTTTTTTTTCTGTTTGCAATAATTCTGAGAGAGAGaataaaaaacaat ggaatgttAAAAATGCAGTTAAAAATATAAACAGTTTATAATGTTAGTGG ACATTTAATTGAAAAGtcttaaaaattgaaaccaTTAGAAACAGCTTTTT GGTGAGGGAAATCTGAAAACAGACTCAGAAATGCTTAGGTCAAGGCTTAC ACAGCTGAAAGATGCTTTAAAGGAAATAATTTTATTGACGATGCTTACAG TGAATCAAGCTCAAAATATACTTAAATTTGCTTAGATTTTAATTCTTGGC TAAGAAGTTGAACATTCAAATTTCTATGAAATGTTCCAATCCCTATACTA AACattccaatttttcagaaatcttTGCCATTTATTCACTAAAAAGCGTA ATGAAGAATGTaaatgcttagcatatgcttaaacTTATCCCATATCTCAG CCTAGATAGTCTTCAATATTAGTATGTAATATTTTAAATTCTCACAAATT TATTATAGAGGAAAAGCAAAATCAAAGTTTGGATATAATTCAAATTTGGT TCATTGTTCAGAAAttgtttaaaaacattttcaattctcactgaaaaaag gccaaaacaagcaacatgctgaatggacctacctgagatAGAAACATGCG AGGGGcaaatcacaaaaataaatctcgtacacaattttataaatcaaaaa taaatccaaaataaatcataaatcaaaaataaatccaaaataaatcataa atcaaaaataaatcagaaatgaatcaataaatcaaaaataaatcagaaat aaatcaataaatcaaaaataaatcagaaataaatcaaaaatacttcgaaa aaaaaattgacttttcaactttttttaattttttcaactttttttaattt tttgacaataattttgattatcagttcgttataatttgaaaaatcttttc cataaaattactccttttcataaataagagataaatcaaaaatagttcaa aaataaatcatgaataaatcataaatcaaaaataaataaaaaataaataa aaaataaataaaaaataaatcatgaatcaaaaataaatcataaataaatc ataaatcaaaaataaatcaagaataaatcataaatcataaataaatcaaa aataaatcataaatcaaaaataaatcaaaaataaatcataaatcaaaaat aaatcataaatcacgtACACCAAttttcgagtgatttgcccctcggaaac atgctgaatgaagatgaaaacgtTCAAACGAAAAACGAAATCGTtgaaca atcattcagaacacaaatatgacaatctattaaaattagtcgtttgtttc ttataaaaaaacgtttagaaaccaaaatttcatgctattgaaatgttctt ttatattcaagactttgtgagcaaaaaaacatctatctcatcaaaaaatt gagtaatttggctaagaacattgatgtagcttattaatagtgattcttat agataaagagcgttttttgagctgaaaaattctttttttacaaaaatctg cttgagccatctttatctacttccatgcaaaaaaatcagaaaaaaacaat gatccaatatttcacaaagtccaaaaaacccttttttagccgttttttgg cctaaatttgcccaaaaacattttttttttcgaaaattgggctccatcac attcgagggtttataattaagcatctttgtgcaaaaaatcataaagaatg aaagagccaatctcgagaagggctaatacctaagtaattgatagtgtgct tataaaaaaatatcaaatttggccagtttttctataaaaacacgccaagc aaccaaaatttcatgtctaaacacgcatattcttcaaaagtaagtcctca tgagcaaaaaaaacatctatctcataaaaatattgagtaatttgactaag aacattgatgtatgcttattaatagtgattcttatagataaacatgcgtt ttttgagccaaaaaaatttttttttgcaaaaatctgcttgagtcatcttt tacctatgattgtaccctactttcatgcaaaaaatcagaaaaaattaatg atccaatttttcacaaagtccaaaaaacctgttttttagccgttttttgg cccaaatttggctaaaatcgggctccgtcacattttggccaccaccattt tgcacctttgtaccaaaaatcaaaagattcctatgattcaatatcgagaa aagttggtaacgaacggacggacaaacggacagaggttaatttataggac ctcaaccccaccggggtaggtccaaaagatGATGAAGCTTGTTTGACACT GGCTTTTCGATGTTTTAGAGGTAAGGAACCATACTAAGTTTTGGgcacaa ataaaaaacaatcctttctTTCAAGTAAAGATAACTCTAGCTCTAAAGAT AAAATCTAATGAAACAACTTCCACAAATCCAAAATTTGGCTCAAATTCGg ctaaaactttttctttaaaaaaatcttgaagtcTTACATTTTAAGGATTA CAATTTCGCATCACTGtataaaaaatcaggaaaaactaaagaaggaattt cacacaaagtccgaACAACCCcattttaggcactttttggctcTAATTTG CGAAAAAAATCGGGCTCTATCAGATTTTAAACAatgccattttacatcag tgtgcaaaaaatcagaaaaaaataccaagttGATCgatagaaatgctcat tttgcCTAGAAATGAcaatagggaatttccccaaataagaaaatccaatt tttacaGTCAAAaatagatttccaaaaaaaaacagcttCAGTTCTTGGAG AACGTTGCCCtttatctttatgcaaaaatttagaaaaacaaataatgcaa tttcacacaaagtccccaaaaacacttttttagGCCCTTTTTGTCGCAAA TCTgaccaaaaattattttttcaaatattggaCTCCCTCAGATTTCAAAC ATAACGATTTTACATcatcgtgcaaaaaatcagaaaataccAAGGCAATC ACAAGAAATGctaattttccctaaaaatgataaaagggaatttccccaaa taagaaaattagatttttacggccaaaaaaagttttttcgaaaaaaaaca gcTTCAGTTGGAAAATCAGGCTTTgtcactttttttttacttttagaaGT GTCGAAGGTTATTCAACATCATCAGAAGTACAATTGACTTTAATCACAGT ACAGTagtaaaatattttacagaatgAATGTCACTTCAGAGACAAACACT GGCCATTTATTGGATCTCTGGCCAATATCAATCGCTACTGGACCAGTTGT GGCACCATAACTTTCTGCAAAAAGagactactaaaaaccacattaCTTTA ACACACCAGGTTAGCCCTGGATCATAGAGGTATACCTTTATATTTTTACT TTCAAGTCAACAACAAGGGTCTTGTGGCTGGTCACCCAGGCATTTTGCCA AATCCTGAGGAACAGCTGCACATGACAGTGAATCTGATATTCCCATGTGC AGCTGACCAGGTAAGGCGGTCattgaaaaaatgctctgttcgcgtcgcaa tgggtgttaaaaatgcatgcgggcggacgggcggtcaaaaaaaTTCCTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066899TCONS_00066899Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_462supercontigscaffold_462:743841..752039 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.95 5.81 3.46 3.96 21.94 9.61 6.52 9.29 4.07 5.25 6 1.33 0.97 0.64 0.81 1.06 2 1.81 0.69 0.84 3.57 3.66 5.82 4.84 1.42 2.81 3.87 2.28 3.71 3.44