XLOC_041836 (gene) - C. hemisphaerica

Overview
NameXLOC_041836
Unique NameXLOC_041836
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_462:7179..15838-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041836 ID=XLOC_041836|Name=XLOC_041836|organism=Clytia hemisphaerica|type=gene|length=8660bp|location=Sequence derived from alignment at scaffold_462:7179..15838- (Clytia hemisphaerica)
CGAAGCTTTTCGGTACCGTAAACTTTACCCGACGCTTTCAGCAGCGCGTG CGCAATTAAAAATTTATTTTGATAAGCGAGATCTCTCCTCTAGACGCCTG AAGAAATGGTTGTTGTTGAAGCTTGAAGGGAGTTTTCATCCATTAGCATC GTCTGAAATTTTACTGAAAAGGCTTGGTTTATAACGTTATTGCAAAGTAA GGGTTTTGAAGTTTGCTCTTTGGATTCTATTTTTCCAGTAGGAGATTGCA CAGCTCTTATATTGTCTATTTTTTCGCATTTCAGTATGACAGCTGAAGTC GAAACTGCACAGACAGAAACTGTCACTTCCCCTATGGAAGAAACTCCAGC TGAGGACCCTTGTAAGTAGAAATTTACGTAGAGCTAGAAGTTGCCAACCT CTGTCAAATGTTAGGGTAATTGATTGTATTTGCTTGTCAAATAGAACCAG ACCTTAGTTTTGCATACTGGTAGATAATTTAGTCAAACCAAAAAGATTTC TTTTGGGTCCATTAAAATGTTCATGAGGTGTAGGGATTTTTCCAATTCTT TGAATTACTGAGGAGTCCAATGATGCAACAGAAGGTCATACCCAATCCAC GTAATCTTGTCTAGTAGCGGTCAAATTTTTGTTTTGGATCAGCCTTTAGG CTTTAGACCTTCCTTCTAGGAAATCTGATCTTGTTCAGTCCTGACAGGTA CTGGCCACTCGTTAATGTTTAGGGGAGCCTTCCAAACTCGTACGGAAAAC GTCAAATGGACGTTTAGGGGGTAGGGGTTTAATTTCTTGACATTCTTTTG TGCCAAATAAATTTTCACCAGAAATATCAGGACCCTCCCAGTGCTCCAGA AACTTCCGGAGTTTTCCAGAGCAGCTAAAAAACACTAAAGTTCCGGAGCT TTTCCGGTGCTTCCGGAGCAAGCGATTTTTAACATGTTAAAACCGTTTAA ACGTAGTTACAAAAAATATTCATCCCCAGGTGATGGACTTTGGTCATAAA CAAGAAATTATCATGCGCGTCACTTGAGTTGATTGTGATTGATTATGAAA ACATTGTTGATTACATTATATTGAATGCATTATATTCAAAGTATCCACTG GTCATAATATCGAAAAAATTAAAAAGCGTGAGGTTGGCTGGTTTTTTAAA AATGTTAGTTTTTACATGACCGGTTTTTTCTGTCGCTTTATATTATGGAG TTGAAAATTCCGGGATTATTGGTGAACAAGTTTAGAAATTATCTCCGTTA ATTCTTAAATGTAAACTATGCAAGCTGTAGCAAAAATAAAGATGGCTGAC GAAACAACGATGGAATATTCACAGCGAGCAATGGGAGAAAGGCTGAATAT TTCGAGATCAAGTTTGATTGCCACGGCTGACATTATTTGAAGGGGGTGGG GTTCAAAATCAAAATCCATTTGACGTTTTCCGTGGCAAGTCTGAGTTTGG AATGCTCTCCTTATTAGATACAACATTGTCAAAAAATTGTTAGGGGATAA AGAGAACCCAAGGCATATAAAACAATGATGACCTGGATAAATAAATTGGA AAAGTCAAACATTTTTAGAAAAGAGATGCATATTTTTTAATCGAATAAAG ACAGACAAGTCACTCAAAGCTTTCAAAAAACTACAAAGAAGGTACTCTTA TAGGAGGTTACTAGAGATTGAAAGTGTAAAATCGAAATGAAAAATTAACT TGTTCTATGATTTAATTGCAAACTTTTGAGAATATCTACCTGGTTATGCC TTTGTTTTCGAAATTTTATTTTCCTGATTGTAAACTCCCCAAAACTTTTG CATGAATTAAATTTTGAAAATGGCCAAAATTCGTGAAAAATGGGAAAATT TTTCCACTTTTAAGTTATAAAAGTATAAATTGTCTTCAATACTCCAGGCA AACAGCAACAGTCTATTGTATAGCTAATTACACCATACCTCAGTGAATGC AAGTAAATCCAGTGGGAAATTGATATAACCCAAAAATAAGAAGCTTACTT CAAATTGGCATGCTAACATTCTCCCGAAGTAGCACGCAATAAGGCTGTAA ATTTTCCTGCACAACATTCTACTAGGTATAGTCATCTGGGGTAATTACGG GACGATTTTGACTTATTTGGGCATCACTCTGAAAGTATTAATCCTAGAGA TCCGATCTTTTGATATTTTATTTGTCAAAGTATGACCTTTACATAAGATG TATTACTCTTCCTTGAAATTTAGTAGATGTTCCTAAAATTTATTTTAAAG GTGTCCTGTAATTACCCCGCATTTGGGGGTAATTACGGGACACCCTCGGG GTAAATATGGGACAGGTATAAAATGTTATTGAAAAATCCAGATATCTTTC CAAAAGGTCATGATATTTGAGGTTTTGCATTNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATT TGAGGTTTTGCATTCACTTGATGACTTCAAATCCAAGTGCTATCATTTAA AGGACTTTCAACAAAATTAGTGACAGTGTCCCGTTTTTACCCCAGCTTTT TTTCCCATTTTGGGGTAATAACGGGACACTTTCAACAGTAATATTTGTAT AGAGTAATCTAGACCAACTGAAGTAAATTTAGATGCAAACCTTTGAAGGT TTTGAAAGACTTAGAGTGTCGTTATGATTCCATTAAACTAGGAAATCAAG TTTGTACTTTTCTTATAAAAAATAAACACTTGAAACTCAAACTTTAGTGT CCCATAATTACCCCAAAATTAAGATTTGACTACGGGGTAAGTATGGGACA CACTTTTTAGAGATAAGGTGCTTTGTTTGACAATGAGACTATTATAACCT CAAACCATAGTATCTTGGTGCCAGAATTCAGTCAAAATATAATCAAAGTG ATTGCAGCTCTTCCTGACACTAAAGCTTTAAAAGTTCCTTCTAAAACTAC GAAAATTGATTTTTATGGTGACATATGAAACTTTTGTTGAAACATCAAAA GTATATGTTAGAATAATCTAACTAGACACTTTTCTAGCAGCTAGAATGAC TCCAAAATCCTCCCCATCTGAATCCTAATTTATAACAATAACACCATCTT TAGGGGTGTCCCATATTTACCCCTTAATTTTAACTGTCCCGTAATTACCC CAGATGACTATATTAGGAATTTAATCAGTAAAACAGCAGATATTAAAAAT TTCTCACCCAAATAGCTGGAGTAATTTAATATGTGAAACTGAGTTAATAG GTCATTGCATTCTCCCAAAAAACTATTTGGTTAATTGTAAATATTACCAA GGGCAATTAAGCCTACCCTGGAAGGGGTTTTGATCTCAGCAAATCCTTTT AGGATTATATTAAGTTTTATCATCTTTCCAACATGTGCATATCTTTTTTT GCAGCTGCCACCTCTGAAACAGAAAGTGATAGTGATGATGAAGTCCCCAT GTTGGAAGATGTAGAAGATGATGCAACTAACAAATCAGATGCTTTTGCTG CTGCTGGAATCCAAGAAGAACCTGTCAGTAAATCTAAACAAAGTAGAAGT GAAAAAAAGGCACGAAAAGCCATTCAGAGACTCGGACTTAAACAAGTTAC TGGTGTTACACGAGTAACGATACGTAAAACGAAAAATATATTGTTTGTTA TAAAAAAACCAGATGTATATAAAAGCCCAACTGGAGACACGTATATTGTT TTTGGAGAAGCCAAGGTAGNTTGTTATAAAAAAGCCAGATGTATATAAAA GCCCAACTGGAGACACGTATATTGTTTTTGGAGAAGCCAAGGTAGGTACA ACCATGGATGTTTGTTTCAATATTGGTTGTCGTGATTGCATGTCACCTTA CAAGGTGTCTTAAAGAAAACTACTACACTTTTTTTACAAGCAACCCCGAT TTTCGGCTCAGGGTTGGAGTTGCTATGGATTTAAGCCAAAATGTTGCTTA TGGAATTTCAGTCTAAAATGCCTAGCAACTTCAAAAAACTTTGCTTTTTA TCTCATTTTGTGTCCAAAATACCTCGTACACATTTTAATGAAGAATAATG CGAGAATTTTGAGGCTTTTTGGTTGCTTTTTTCAGTTCAAGCTCAGTTTC AGGGCTCGGTTGTTAAGACCAAGTTGCTTATTTGGCCATTCTCAGGCTGA ACCATTAGCAAATGGGTTGCTTATAAAAAAATTTGTAGTTATTTAAAATG TGCACAATAGAGGAGATATGGTCCCTCATTTTGCACTATGTAATGGTATA TCTTTACCCCCTGGTGACTAGGGTGCGTCATTTATATTACATTCTGTTCC TTTTCACCAGACCAATGTATGATCTCTCCTTTCATGGGGGAGGGGGGTGG ATAAAATGACACAGAAATTTTTAAGTCGAAAGAAATTGTGATTGCTCCAA ACAAAATTACTTCTTGTCATTCAATTAGTTCCCTTTAGTTGGAAGCTTCT TTGAAATTTTAGCTGTAANTGGATAAAATGACACAGAAATTTTCAAGTCG AAAAAAATTGTGATTGCTCCAAACAAAATTACTTCTTGTCATTCAATTTA GTTCCCTTTAGTTGGAAGCTTCTTTGAAATTTTAGCTGTAATTTTTAATT TTAGATTAAAAACATGTAGATTCAAAAAGTTCCTATGATCCAATAAGGGA TCTGAGTACAATTTGGAGGTTTCTTTTGTCATAACATGGTTTTTGAAGTA CAACCTTGTCCCCACCCTGCCAAAAGTGTCCACAACTCCTGGGGTAAACA AGAAATTATATTTAAAATGATAATTGGGAAAGTGGACTTGTGTAGGCTTT TAGTACTGTGTTATACTTTGCCGCTTTGTAATTTTGAAATGTATTCTCCA AAATTTAGATTGAAGACTTATCACAACAAGNTTACTTTACCGCTTTGTAA TTTTGAAATGTATTCTCCAAAATTTAGATTGAAGACTTATCACAACAAGC ACAAGTACAGGTATAACTAACTTTTCACCCTGTATACTGCATCAATGTTT CAACCTGTTTTTCATATTTTAAAACTAGGAATTTATAAGAACATAAATTC TCTACTCGCATTGCTAATGTTAATGCTAATTTTATCAATTTATCATAATA ATTTTGTTTAGTTATTGTTAAGTGAAATTATTTTAAAGGGCTAGGTCCTA ATTAATTCAACAACCGTTCAACTAACAGAAAAAATAATTAAAATGGTACA TCTCCATTTTCAGGCTGCTGAAAAATTCAAGGAACCAGAACCAGTGAACC CAGCTGTGTCAGATACCAAAGTTGAAGCTGCTGATGCAGAAGAATCTGAC GATGAAGAAGTAAGAAATTCCTTTTGAAAAATAGTATCACTTTGATTCTG ATTCGAGGGGACAGATGTAAATTTTTTAAATCGTGCTTGGGACTTTAACT GCCCTTTAAAGATTGAATAATACACAATTGAATGGCTTCATGAATCAAAT CTGTTGACAATGGATAAAACCAGTGTCATAAAACGTACAAAATCTAGCTG GAAGCGATTCGGGAGGCCAGCTTCAGCCCATCAACACAACAAAATATTAT TAGAGACGAATGCCTAAAAAGTCACAGGAAAAAATTATTGATTCCCTAGC CTAGGGATTGTTCATTTTCAGATGTGTTTTTTTATTCGGTCACATTAGTC TAAAATTTTAAGTTCGGGAAAGTAAGGAAACTAGGGAAACCTATTCTCCC ATGTTGGAAGTGTATTACCAATGTGTTAGTGAAAACGGATTTCCACATGT GGAAAACTAATATTTTTAACTTTCTAGTTGCCCATTCAGAATTGCATCGG GAAATTAAAAGTCCCAAGTTTTTCTAAACTGATTATGGATGAGTCGGGAA AAGAGAGATCACGAGTTTTTAAAATGATTACTTTCTACAGGCTAGGGAAA GGAAATATCACGAATTGTGACCTTGCTTGCTTTATTCTATTCTTTCTCTG GATTGGGAAATGTGATTTCTTGAATTAGGGAAATAAAATTTCCCACATTG GGAAATTCGATTTCCCGAACTCTTTAATTTGAGTGCATCCTTTAAACAAT TAATTAAATCAGAACTTATTTTTTAAACTGTCACAAATTAGAGCCTAAGT TCGGAAAAATTATTTTCAGGTTAGGGAAAATTGATTTCCCACCACGAGTG ATTTTTCACTCAAAAGTGTTCGAGTCGTATGTAAAGCAAACCATTATAAG GGTGTATTCGATCAGTGTGTAACACAACGCTAAAGATGAAGCGTCCCGCC AGGGCGGCCTCATTCGTTCGCAATGGACTTGCGTCGCAAGGGCTTAGTGG ATCGGTGAGACGGGTTTGAGGTCATTAAGTTGGCTCTCTAGTGCAGCTCC ACTGTTGTGACAAAAGTGCTGGGATTCTCAAAGTAGCACAAGTACATGTC AGAACGAATGAGAACTATCGAACCAATGCTCACAGAATGATCGAATACAT TTACAGTATGTGGCCCCCAAAACGGCGATCAAATTTGAAATTTCTCTCAA ATCTAGAGGAAAAGAGATTTTACAAAAATTTTTGCTGCATGAAAACNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACAAAAATCGTTTAATTCT GATAAATCTACAAGTCAGAATCTTCATTTTAATGAAAACCTCCGTTTTGG GGGCCGTCTCCGTTTTGGGGGCCGTATACTGTATTTATTTTACCAGCTTT CTATAAATCAGGATTTAATTCGTGAATATGGGTAACCCTATGGGGTTTTA TTGGGGTTCGCTCAAGAAAAGCACTTTTTAATAATAGGGAAATTTAACAT CTATAGATAGTCATAAGATTGGGAAATTTCATTTCCATAACTAGGGAGCT GTTGCATCTTCCCTATCTAGGGATTGGTTAGGGAAAAATCTAGATTTCCA GATCTGGAAACATGCATTTCCATAGCCTAGGAAATCAAAAAAATTTTCCT TTGAGTAAAGCGTCTTCCCTAAGTAAAAAATTTCACCTTTTCATAGGTTG ACGAAACTGGAGTCGAAGAAAAAGATATTGAACTCGTTATTCAACAATCG AACGTTTCTCGTAAGAAGGCCATAAAAGCACTGAAAAAGAATGATGGTGA TATTGTTAATGCTATCATGGTAAGTGGTCCACATCTTTGCTTTTCTCTTT TTCTATGTATGATGGAAATCTTTCTTTCTGAGCTGGGAATTTATAAATAA TTTCGGGTTTTAATAAGAATTCCTTACAATGACTTCTCTCTTACTTTACC ACAGGAACTGACGATGTAAATGGCAAAACTATCAAAACCTTCAAGCATTC TGACATCTACGCAAATCAATACACAGGGATTGTGTTTGATGAGTGGGGCA TACAACCTCATGTACAAAACCACCAAACTTTGTATACAGACCTCTTTGTA ATAAAATATAAATAAACCACACCTCGTTCATTCGTTCTTCAGTATTCTCC GTGTGGTTCCAGTTCCCATTGTGATTAGCTCCTTGTCCCGGGGAGAAAGG GATGCTGTGAGCCATAAGGGTACCCTTATTTATACCGAAAAAATCTCTTT TCGAAATAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066940TCONS_00066940Clytia hemisphaericatranscript
TCONS_00066939TCONS_00066939Clytia hemisphaericatranscript
TCONS_00066938TCONS_00066938Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066939-proteinTCONS_00066939-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_462supercontigscaffold_462:7179..15838 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
NACA2nascent polypeptide-associated complex subunit alpha-2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1526.09 1547.18 1600.93 1519.26 1041.42 831.64 1043.92 1092.8 1450.26 1070.22 1511.01 1652.41 2086.95 2038.85 1962.08 1829.09 1853.54 2113.41 1008.32 1111.84 1935.18 1867.22 1833.87 1765.18 1507.22 1667.4 1854.17 1957.89 1102.21 1188.75