XLOC_042138 (gene) - C. hemisphaerica

Overview
NameXLOC_042138
Unique NameXLOC_042138
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_47:130668..137315-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042138 ID=XLOC_042138|Name=XLOC_042138|organism=Clytia hemisphaerica|type=gene|length=6648bp|location=Sequence derived from alignment at scaffold_47:130668..137315- (Clytia hemisphaerica)
GTTTGCGGCATTCTAGAATTGATTTTCTGCAAGAAATCTCAAAAAAATCA AAACTACAAAAAAAATCAGTTTATCTAAATGGTCAACTTATTATCGGAAC CTTAAATTTTCGGATGAAATTTTCGATTCGAGATGTATATATCTCATGAA ATTTTCTTATTGTTCATCGCGACATGGTCTTAAGAAGTTGTTGGCAATCT ATGGTGGTCATTTTCATTGCGCTTTCCATCTCTTTAACTCACTTTCGGAA AATATCAGCTTATCCAAAACCAGGTAGCATTGCTGAACCTGCAGAACCTG GTCTTCCTGCTTTACCAGCTTTACCAGAAGGTAAGTGATCAGTTGAGGGT CGCGGTCTAAAATAGACGAATTTACCGTGGAGTCTCTCTAACTCGAACCT CGAACCCTTAACTCGAGATTTCCTTGACTCGACCAAGTTTGTGTTCCCTG TGCGTATTCGAGTTATGTAGACTCAATTGCATAACGGAAAATTGCAAATC TTTGAATATAATAAAAATACTGCCTACTGTTGGAGCCCTTTCATTGTTGA AACGACCTATAACTAATACTTTTGCCAAGTCCTAATATAAGGTGTCCGAT TTTTCGTGACACCTCTATCTTTGGAATTATTAAAACTGCTACAATTCACA CACACACACCAATAAATATTAATGGCCTTTTCCGTGTACAGGGAGCAATC TTCATCCTGAAGCTGCAATAAAGTCGTCTTCTGAAGCATCATTCAACGCN TTTTCCGTGTACAGGGAGCAATCTTCATCCTGAAGCTGCAATAAAGTCAT CTTCTGAAGCATCATTCAACGTCGGTGGTCAATCACTGGCAGCGAATTCA CACGCACATTCTGATCATGATCCTCAGAAAGGTCCAGCACTGATCGAAAA TCATGCAAAAGGTAGTGTGGTGCTGCCAGCCAATTGTGGTCCTATGTGTA ACCAGCAATGTCAGCCACAAGAAGCACCACCTCAAGATTGTCATCCCAAT CAACTATCTCCTCATCCAGAAAATCCTGCACCGTTACCAGTAGCACCTCC TCCTGCACACCCCCCAACCACCCCTGCACCACTACCACCAGGCGAAACAC CAGAGCCAGGTGAAGTGGTGGATGTTCCATTAGGACCACATGTCCACCTC TCATATCAACCTGGTTTGGAACCGGATGATCCACCGGGTGAAGAGGAAAC TCCTGGAGAAGCCCCAGGGGAATCTCCTCATGAAACACATCACCATCACC ACCATCATATCGATCTCACCGTTCACCATGACGGTCCCAAAGAAGATAAT CATGAAGAAAAAAAGCACGAGGAAGGAGAAAAACCTGGTGAAGAGCCTAC ACCAACTGAAGAGCATAAGCCTGGTCATGAGCTGGTTTATCATCAAGAAT GGCATCCTCCAACAGAAACAGAGGACGAGGTTCATCACGACGAGGTAGCA CATTATCATCCAATAGAGCATGATCAACCACAACACGAGGGGGAAGTGGC ACATGAACACGACTCCACTCACGATCACCATGACCAGGCAAGGGAAACAC GCGAGGAAGGTCATCACGCATATAACCCAGGATCGTATCACGACACATAT CGTGATATTTATCATCACGAAGACGCGATACACGAGCACGGTCCTGACCA ACATTATCCACCACCCTACCCTCCCTACCACCCACCGCCTGATCCTCACG AAGAACATCAACAAATACATGACACTGATAGACACACAGATCAATTTGAT CACGGACCTCACTACGACGTTCATGTTCCGATAGGTGGTCATCCTGACCC TCACGATCCACACGATCACTTGGACGCACACAACCCAGTCGAACATTTCG ACCATCGTGACCCACACGCTCACATTGCACCCAATGAGCATCCTGAAGAA TGGGATAAAGACATAGTACACCATAACAGTGTCTACTACCCTGAACACTA CCTTCCTCCTCCACCTCCGGTTGGTTATGAGCACAACCCTGAAGATGGAC ACCTTCATTACCCAGGGGAAAAGCACCTCTTCCCCCCAGGTAGCGTCCAT CCGCATCACGCGGATGATGGACATGAACATCAGATCAGTTACAATCATTC AGATTATTACAGTCATTTCCAAGACAATGATGAACATAAAGACAATTTTG AGCACAAAGATGATGTCCAACAAGTGCACAACATACCGGCACACGATCCA TTGCCACGCTACTACGATGACCACTACCCACCACCCCCACCTACCCCAGG AGAAGAGCATCATCACCACTACCACGATGGTGAGCATCCTCCCCCACCAC ATCCTGACCCTCACTACCTGCCACCTGAACAATACCGATCCGTTTGCCCT GGTTGCTACCAGTACGGCTATTCATATGATCCGCGGTGTGGCTATTGTTA CGACTATAGCCAATACCACCCTCCTCCTCTACCCCCACCACCACCTCCAC CCCCGCCTCCTTCTCCTCCTCTTCCACCACCTCCAGAAGATGAGCATCAC CATGACTACCACCACAACGAAGACGGGGGTCACCATGAAGTAGATGGGGG TAGTGATGAGCACCATCATTACTATGACAACCCACCACCAGAACCAGAAC CGAGATACGATGTGCATTACCATGAACATAACCACAATCACCCTGACGAC CATCACCATCCCATCATTCAATTAAGTAAGAGATCTATCTAATCTTTTTC GCCTTGATTAATCTTTACATATATTGTATTTTTGAAAAATTTCATCTCTT TTCTTTCTGACTGAATCTCCCCCTTGTCTAATTTTCGAATAGCTAATTGA AAAGAAAATAAAGCCGCAAGCTTTTTAATGTTATTTAAAAGCGTTTCTGT AAAGAACGATTCTTGTGGCTATTAGATTTATTTTTTCCAAATGTTCAAAT TAAAAGAAACTACCTTATTGGTATATATTTTGGCGTGTTACAAATTTTCG CGGGTACTTAATTTCGCGAGATTTTTGGTCAATTTTCGCGAAATTTAATA CTGTTTAAATTTTTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTATTT TGTTAGTATTTTTACATCAAAAACGTTGTGTTTCAAAAATACCTAGTTTA GTGAATCGCGAAATTTAATACACGCGAAAATTTTCCAGAAGTCGGCAATG GCAAAATTTAATACACGCGAAACACGTTTTTTCGAAAAAATTTCGCGAAT AACACGCGAAAATATATACCAATAAGGTAATGCATAATTATACCTTTGAC ATTTTCTTACAGCATCAGGTTGTTGTCCTATCGTCATGCCAACAAAGAAA CCAACCACACCAGCTGCGGGAACCACACTGGCACCTTCACCTAGTAAGTT CTTTCTCTTCTCTCCAGTCCACTTTCTTTATTGAGTATTTCATTAGTATA TACCTTTTCGAGTGAGATTATAATATCATTATCAAAATCGCCAATTTCCA TCTTTTCAGCACCGCCACCAAAGTTCCAATGGGCTTACAAGGAAACAGAT CTTGGTAAGATATACATAATTTATAACCACCTATAATGAATGCATTCCTA TATCCCAACAATATTCCCAAAGTGCAGTGTAAGGATCGAAATCAGCAAAG ATGAGGAAAATTGCACTCTAAGGGTGTACAATTTGGAAAGTCTGACCATA TTTTGTATATTTTCAAGAAAATGCACCGTAAGGGTCCTATTATTCACTCA AATTTGCTCAAATTTTGCAAAAGATTCTCTGCACTGTATGGGCATGATTA GAAAAGCCTAATTTTGCGTCGCACGTACGATCATNTTCTCTGCACTGTAA GGGCATGATTAGAAAAGCCTAATTTTGCGCCGCACGTACGATCATATTTT TCGGACAAAGAAATTGTTAAGTTAAATCCTTTGTTAGAGAAGCTAACAAA ACCTGACAAAAACCATTGCTCGATTATATTTCAGCCTACGGTCCACCAAA TTGGAAGCATTTGGCGCCATTGTGTGGTGGTCAGATGCAGTCACCAATAG ACATGAGTGCTTCCAACTCTGCAACACTTCCATTACAAAGTGGTATAGCA ATGGAAGGAATCGAAGGCATGATTCGTGGGAAATTATCCAACAATGGAAA GACTATAGGATTTGCCATAGATAACAGCATTGATAACAATGCTGCTAATG ACGACCATGCAGCCATGTTGACTGTTCAAGGAGAGACGTATACTTTGAAA CAATTTCATCTGCATTTTGGATGTGGTGGTGAACCTGGCTCTGAGCATGC GCTAGATGGACAAAAATTTGCAGGAGAGGTTTGAAATTTAAATTGGTGAT ATTCTTTTCACCATACCTTCGATTTGATTTTGATTTTGGATGGTTATCAA ATCTTTTCATTGACATTTTTTTTGCCAACAAATTAATGAACAGTACAAGA TGTTACGTGGTTTTCAATCCACTTAATGGTGATGATGTCTTACTCTTTAC TTTTTAGGTTCACCTGGTATTCCAGAACACCTTGTTTCCGAACCAAGGAA ATGCATTGAAACAACCAAACGGTCTGGCTATATTAGCCTTCTTCGTCAAG GTATTTTTTTCAATTTCTTTCTGATTTAATGTGTACAGCAATGTAAAAAG CAAGTGCACACGATTAAGAATTTAGAGATAAAACGTGATAAAATCAGAGA TTCTAAAAGGTTTTTCCAAATTATAGATTGATCCTGGAGCACCGCCCAAC GCCGAATTCAGGAGGTTTGCTGAGAACGTGATGAATGTACAACAACCAGG TATGTTGAATACAATAACCCTTTCCCTTATTAATAAGGGAACAGTAGAGC CTAGTACTCAAAAAACACAAAAAGGTAGGGGAAAGTAAGTGTGCTATTGT AGAAACCCCTCTCTCTACAAGCTCTTTAGCATTAAGGATATTACCAATCA ATCTTTCAATCAATACTTCTAAATCATCGAGTTCAGTCATCGATTTTTAT TCTTGAAACACCAGGCGATGTCTTACCCATGCCAGGAGGTTTTTCAATGA CGGGGATGGTTCCACACTTCACTGAAGGCTTGAGAAACTTGAGACGGTTT GTGTACAAAGGTTCACTGCCCACGCCACCATGCTATGAATCTGTCACGTG GGTCATCTTCAATCGACCAATCCTGTTGAATGGAGAAACAGTAAGATACA TTTCTCTCTTTTTGGTTGAAATGTTTTAAATTAAAGAAATCACTAACTTT ATCTCTGTTCTCAAAAAAATGATGCTTTTGCTCGAACCTGAAACTATTCT AGCTACATACTTAAAAACTTAAGTAATCAAATCCATAACGAAATCTAAAT TGACTTTCCCTTAGGTCAATAAATTCAGCTCAGTGATGGGTGCTGGTCAA CAGCCACTGTGTGGAAATTTCAGACCAATTCAACCTGCAAACGGACGTGA AGTAAAATACTTCGCACCTGCAGGGGCTGCTGGACCTGCAGGAGCCCCTG GACCGACAGGGATGCCAATGGGTACAACTAGGAGAATGACAACCCCACGT ATGGGAACCACACGACGAATGACTACTCGTAGGAGAAGTACACCTATGGG TTAAGAGAAAAATATTACCATTTTAAACATGGTGCAAGATAATTCGAGGA GTTTGAACCAAGCCAAATTCAAGGACAAATGTTCACTCATGCGTTCATCA GGTTGTTGGCGTGCAACATTGCATCGCTTTAGCTTTTCAATTCCATCTTT GATTTAAAGGTCACTTTTATGTTGGTTAATATTAAATAACTTTGCTGAAA CAACAAAACATGACATTCGTATATAGCAGCGTTAATTTTTAAGAGACATT AATCGAAAAGTGCATCGAGAATAAAAGACGAAAATTCGTACAAAGATTAC AGAGTCCTTGCTAATTAGAAGATTCGATACTTCCAAGAAAACCCTAGGTG CATAGTTAAAATAATTTTATAATTCAATGTTTTTTGTAAATATTTTTGAA ATGGAGAATTTGTAAAATAAGAACGGAAAAATCAAATGAATATTTCGCGT ACTAGTTAATCTTCGTTTTTCTTATAAAACCTGATAAAACACAAAATGAT AAAATTGTGAAAATATTCTCTTCTATCTGGCATAAAAAATATTTCGATAA AAAGAGATAAAAATAAAGCAACAGGAGGAAAAAAACAAGTTAAAAACAAA TTTCATTTTTGAAAAATCATTGTGAAAATATTATTTGGCCCGATACCAAC TTCCTCCTTTGTCTTTAAAAAATTATACAATACTCATATTGCTATATTTC ATAAACCATTTCACGCCACCCACATTGTTCTTAAAACATTAATTCCGCTT TAGCAGATACATGGAGTCTTTGCTTATTCTCACTGACATTACAATTCAGA GAAGGGCGTTTCCACATAGACTGATTCCAAACGTGATGGCTTGAGTAACC TATACCCCTTTACAACATACGCACTTCTTCTGCAAAAATTCTATGTACAA AATTGATCCTTGATATATCCTTAAAACCTTCCTCGTCCTCGACCTACA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067466TCONS_00067466Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00067466-proteinTCONS_00067466-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_47supercontigscaffold_47:130668..137315 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.15 0.1 0.19 0.2 0.23 0.15 31.84 35.04 2.09 3.45 7.25 3.52 8.78 7.79 6.05 18.37 10.21 10.08 0.04 0.07 5.23 6.23 3.53 3.33 5.8 6.89 0.88 0.26 0.04 0.01