XLOC_042194 (gene) - C. hemisphaerica

Overview
NameXLOC_042194
Unique NameXLOC_042194
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_471:316860..322979+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042194 ID=XLOC_042194|Name=XLOC_042194|organism=Clytia hemisphaerica|type=gene|length=6120bp|location=Sequence derived from alignment at scaffold_471:316860..322979+ (Clytia hemisphaerica)
TCCATCAAGTAAAGCTGCGAAGGACAGCTAGGACAAATTTCATTGATTGA TTTACAAGTTCCATCGACAACTGCTCCGTTTTCAATCTTGCAGAAAAGGT TTACTTGTTCTCCACTTGGCATTTCTATATTGTAGAAGTTGGTTTCGCAT GTTGGGCAATTATTTCTGATATCTTTACAACTTGGTTTTTCAACACCATC AGCAGTAAATTcacaaaacacttttttcataATGCAGTCTCTCTCTAGGG AATAAAAATCGGACGTGCAGGTTGGGCAATTTTCCTTCACTTCTTTACAA CTCGATAATGGAGTGTCctagaaataaaataaactcATGATTACTTTACT GGATATATTTTGCAGCGGActatgaaaaacaaaaatagttTTGAGTCTTT TATAATGCCGTGTTAGGCAGTAACATAGGTGTTGTTTGGTAACCAGATCG TTACAAGATAAGTGTacaggcttggggacacgagaagtttttttcgagTT GGTGCagtgcaacatgctccatcccaccaacctgaaacgctttctcgtgc cTCCACCCCgtcttttaataacatttgtgcttctTTCACTCTTGTCCCAg agacaaaatcagcgtgtcttttgggtatttccctcactttttgtcccatg aaacaaaaaaagaaaccacgAGACACGCGTTGGGacggagcatgttgcat tgcaccaacgcgaaaaaaacttcttgtgtTTTCAATAAGTAATGTTTTTT Tcaccatacacgttttttttaaaagatcatccaaaatttttgaagcctat ggatgttcttaactttttgaattttaagccttaaaatgttcttcacttgt tcttaacattttgaccctCGAAggctcatgttcttatatagtttgttctc ataaaaaacgtgtaccctatttacacccctgtctcagtgccccggtggcc tgatttcagtacatgatttttttcagtacatggtttcagtacatgatttt ttcctacgtcactgcagtaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNattactgcagtgacgtaggaaaaaatc atgtactgaaaccatgtactgaaaaaaatcatgtactgaaatcaggccac cggggcactgagacaggggtgtctattTAAACTCAAGTTAACGAGTTTCG TATTATCGGtgtttttcatttgactttttttttgtgattgtgCATGAATA CGATTGATTGCATGATATTTCTCAAACTTGACTTGCATCTTAATTCACAC TTACTAAGATATATTACAGAAAATTGTATGTTAGACATATTAAGTAAGGC TAACCACGGACTCGTAGAACCGAAGCACGTTGATGAAGAAACAAGATGGC TGATGAAAAGTACTTCACtatgaatttttgtgaattcAGCTATAATGTTT CGAAACGTATGGAAATGAATCAGCttgccttttttttttttttttttgtt gttttttttttttgcaaatttactGTAGTTTCAGGGAATGATATTTCCTT ACATATGCTTGCGAAAAGGCTGAATTGCTTTTGACCCGTTCTTACATCCC TAAATTGACAAATTGGTACTCAAATTATAAAGAAAAGGGAAAAAAAGGCT TTGATTCACTTTGTTGAAATGACCTTGGTCAAAGATTATTTAATAAatcc tttcttttaaaaactaaaaaaacaccccgtggcgtttattcgaagtaaat cATTACAATATATTCACGAGGGGCGTTTATCTAAAAGACCCTGCATTtat taaaaatagacaaaaagaacgacaaatttcataaaagacGACAATTTTCG CCGTCCACGACcctgaccgaaagtgactgtaccacccacgtattcattcc tctttAATTATCAcaggaattaactacatatggttttaaagaacgacaaa ttacgcatgcgtgttacaatggaGGATTCTTTAGACGAACAGACTGCTCG TAACAGCCAATCGTGGAAGCAAAATGTTTGTCTTTCATCCGCCATTAAAC ACGATGCattaaataattaaattttttgtccaCGTGAATAATTGGGGGAA AATAATCACACGGCTGTAATTATATTTGTTAGGTGCAATTATGTAAACCA GCCaattactttaagggcagaaactttcgtgggcagaaactttcgcgttt ttcgcgattttgatcctttttcgcgaaagtttctgccaggtaaaaaatta aacctgaaaaacgcaaaggttttttttgcgaaaaataaactttcctcTTC ACttttgcactgtttgctaaatttttgcgtgttttatgagtttttgttac caaaaaaggtaaattttatatgaattcgcgaaagttctatctgtgaaatt tcggctaaaacCATAATTCGTGAAACTTAAATTCGCtgaatttcgcgact ttttgacttcgcgaaactttctgcccgcgaaactttctgcccttaaagta agtAGGAGCTGCAAATAGAAtatagaaaaaatataaaaattaattttgga gagcttcttaaaaaaattaggaaaattttctcttttggtACCTTTTACGC TTTAAAGTTGCCGCGAGACGGGGTTAAGTGATTTGAAAAGTGATTAAGCT GACACGAAGTAGGTACACGCTTCAAAGATTTCCGGGGGGGGCGGGTACCT AGGCGAAATGAGGGTAAGatatgtgccacccttaagggtcTCTTTTTTGG ATCCTCAaaatcccactaagggtcgtTAAAATCACATAATTCAATTCCAG TCCccctaagggttgtaaaaacagCTCAAATTCCATATCGTGACCCTCTT CTATGAaatagtcccaataagggtcacaaaataaggttttttctccattt tggtCCCTATAAGGGCCCAACCGCCAAAAGttgggcggcacatacccgtc atcccGCAAACCTAGCAAATCTGGGGGGTGGGGCAAAGattgtggatgtt cttataaaaaacgtgtttttcGTGACTAATTGTTGATTGCACTTCAAATT GTAAGATAACTACAttctttaatgggataaattttcgtggATTTCTGTAT CAAGTCCCAATTATAATATCCGCCAAACACGCGAAGATGTCAGATAACTA CTTTTAAAATGTTAACTAGCATCTAAGTAGCGCTAATAATGCGTCAACAA CCAACCAGTACGTATAACTTGGCAGAAAATCAGCTCAAAGCGAAATTTAA TcgccgcgaaaatttatcctatTAAAGTAGTGCANAATTGTAAGATAACT ACTTtctttaatgggattaattttcgtggAATTCGGGTCAAGTCCCAATT ATACAATCCGCCAAACTCGCAAAGATGTCAGATAACTACTTTTAAAATGT TAACTAGCATCTAAGTAGCGCTAATAATGCGTACTTCAACAACCAACCAG TACGTGTAACTTGGCAGAAAAAGACGTAAAACTAGAAAATATTGTCTCCC GATGCCATCCGCGAAATcaagtccccgcgaaatcttaaaattttgcggat CAGCTCGaagcgaaatttaatccccgcgaaaatttatcctatTAAAGTAT TACGCACTTGAATTACCTCTATTTGATGATAAAGAAATCCGGTGTTATTT TCACTtgcatatattttttgttcttcgtttttcaaacaaaaacattgact tttcttttctacataaaaaccttttttcaattgtcttttacatttcaaaa tacaCTCGGTAGGTGAGTGCGCGAGAACATGTTTTGAAGCATCCTCTGTA TCGACACGTTTTGAAGCATCCTCTGCATCTACACGTGCTGTTTTCGGTTG TTTTGCTTCGCCCAAATACCATTTTGAATAAACCAAACAGAAATTCGACA AGATTATTAGCAACTTCATATTTGGTAGTTCGGGTAGTTCTTTGTGTAAT TAATGGCCGAGTTGTCAACGCTTGAAACCAGGGGTTCCAAGTTCGTTCGA ATTCGAATGTTCTGTTCAAAGTTCAGAGGTAGCCGAGCCGGCTTGCCGTG GACCACGTGAAGACTATCGAAAGACTATCTAAAAACTCTAGAATACTGGG CTATCCACAttaaatatcgactctatcccGCCCAAATATTCTTTACATCT GTTCATCATACACATAACACTGAAAATTAAAGAGATAAAGTATTTATTat tattctttttctttctttcttcttgAATGCCGAAAACATGTCAACATTTT TGACGtgaaaaaaaacgtaaaaatttacaaatcaaTGTTTTGTCAcgaaa tgggccattccattttatatccctACAGGGGGGTGGACAAACATTTCCAA AGGGTAATCCGATAACAATTTCCAGgaggtgttttttcatttttccaagg gggtaaaaagttattctaaaatatcCATGGGATAAagaactgattttagt tcgtccaccctcactttaaggtatgaagactattattcctctctgatggG AAATtagcccgctcctttagagttttagcgtgggcggccgctaATTCGTC ATCGAAATATCAGATTACTTCATTTCCCTTTTTAATACATTAGCAGTCTC ATTAGCAAAATGAGAAATGAATCTCTTAAGATTTTCTTCGTGTTGGCTCT TAGTCTGCACGAAATGGTATAACAACCTCCAGCAAACGTCTCTaaaacgt tcaaataacgttagatgaacgttataaCAACGTTGTGTTATAGCGCCCAA ACGTTGCTGGAAAAAATACCTCGTAGGGGTTAACAATAAATATACTCGTT TTGCGTTGTTTACTCTCCTCTTCTCCCTTTCCCCTCCAAAATGTACCTTT TTCTCTGAGAGATGCATTATTTTTGTCAAAGTAAAATTTGTCTGTCATGC ATGTAAGTTAACCACTGATTCTAGACCTTTTAataatttcagttttttga agCTAAAAGAATCATTTCAGCAAGCGTATAGGTTAGGTTATAGGATgaag aaagttgaaaaatgatttATTACAAACTGTTactaaattttaataaaaaa aaactcaaaaaataggCAAAAAGGTACAGGATGTGCAGCTGGCCAGGGTA CCTTTTTGCACTTTCACCAGTCTAACGTAGGGtcgaaaaaacacaaaaac agaaaaatctgTACCtctcagggtaccttttttgaaattttgggaaaaca gcagaaaatttatagaaaatttagaaagtttAGTCCCATACAGGGTggct tttttcgcaaattttggcaaaagttttcaaaacatgAGTTCTAcgtagaa tttatttttcagcgGAACTTCCCCGTCGGTTGGAAAGGGTAATACCTCAC CCACCCCCCGTACCccttttggtaaaaaaatctctataaaatttcaattg aatttttgatatttattttGCTCTTTTTATTTTCCAGCTGATCTGTGGTA ATTGGCATTACATGGCATTGACTTCCAATGGGCTTGTCTACACTTGGGGA TGCAATGATTGCGGACAACTCGGACATTACAATAAAATTGATCAGGTGGG TTTTTCTTTAGCCTGTGCCAAGCTCTTCTTTGCGGAAAAGACGTGGATAT GCTCATAAATGGTGAGCAACATGGAGACatctgaaaaatggaaaaacaaa gAAGAGAAAGTGGTGTTACAAAGGTGATTTTGTAACAAATCAATTTTGAg atctcaaaatttttgaaaaagtgacgttaGAAGTGGTTTCGGAAGAAAAT ACGTGTTCAAAGGCCTGCTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067565TCONS_00067565Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_471supercontigscaffold_471:316860..322979 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.97 1.36 1.23 0.36 0.44 0.58 1.39 1.03 0.92 1.14 0.33 1.31 1.66 1.21 1.51 1.27 1.51 1.68 2.08 1.09 2.53 1.68 1.15 1.86 1.29 2.97 0.6 1.75 1.8 1.62