XLOC_042342 (gene) - C. hemisphaerica

Overview
NameXLOC_042342
Unique NameXLOC_042342
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_476:40740..44758+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042342 ID=XLOC_042342|Name=XLOC_042342|organism=Clytia hemisphaerica|type=gene|length=4019bp|location=Sequence derived from alignment at scaffold_476:40740..44758+ (Clytia hemisphaerica)
aaataattgaaaaaaaatcatttaatctaAATTCtcatttcagaaaaata aaaaatgacacTATTAGCGACGCCCTCATCCGCCCAATTAATTCCTTCCG CCCCGTTTCTTGACGCTAATTCTTCAATACAAGATGTtaaaaaaaggtaa ataaaattgaaaatgacacGCCAATTTTGTTGATAGTTCGAAATAGTTTT TAAATAGTAGTGGGAATTCTTGGATGgtaaatgaagccacttattttcaA TCCAAACTACATGACCAACGCTACAGTTAATCCATACATTTCTTGCTCTT GTGAAAGGATGAAAATTCATCAACTCTATCTAGCCATTCGGACTTTAAAC TTAATGAGCCACACATGTGCAATGCATATTATTGGCAAGGTACCCCTTCC CCTCAGACCAGTGACTTAAATGAGATtgatatatttcaaaataattcctC ATCcccataaattattttgagagcAACGGATGTCTCGTTTTGAAACTATT ACCATAGTGATTAAATTCCATGAATAAAGTAAATTTCTTTTAAGCCCCTC TGGGTGGGAATCAacaggccttttcataaattacgtcacgaacaacactt gcctcgttttgaaacgaTTACCGAGGTGATTATCTCCCTTGAGACCTTAA ATCATACTTTTATGAAAAGAGTATTCCTCTAAGAGAATCCGTTGGGAATA AGTTGTCATATCATTATTTCATAAACGAGGCGTCacttatgaaaaggtct ataccaGAGATGctaaaattctttgaaataattttcattttcattttcgt ttacaGAGAAATGTCAAAGAGTAGTATTAACATACGAAAAGttgaagata aaaatgaaaatacaacaAAGGTAAGCATTTTTCGTGGAGGTGTGGCTGAA GTTAAAGTATGAACAAATTAGATTTAAATAAGGTACTTTTTCAGGAGGAG ACCAACCAAAACAAAGTTCCACAAATGCACGTAAAAGTTCtgattgaaaa attcaaaagtttacaATCCGTCCAGGAACTGTAATGGTAGACAAGATCAT TACTAATAAGGTTGTTTactaaaataataacaaaaacacAACATCTTTTG TAGAGAGAACCTGACACACCAAGAAGTAAGTCCGTTGCTACGCTACAGCC TTCCAAATCAAAGATGGCTACCGAAAACAAAAGCAGTCCCAATAGTGAAA CTGCGACACCAACGAAAGTACCTAGCAGCCCATCGAAAATCGGCGCATTT GGCGCGTCATTGAAAAGCAAATTACAAGCCATTAGCTCACCATTAAAGAC TAAAAGCGCCCCTGGTAGCCCAAAGATACCCAAAGAAGGGCGTAAAAACA GGCGAATGTCCGCAGTGACTATAGGTAGTAGTCGAAGCCTGCAAACGCCC ACAATTAAAGTAAATGACAGCTCAGTGGATTTAGATCAAGCAGTGGGCGG TTATCGTCAACGATTAACTAGGTCAGCCCGCCCTGGGCGGCTTACATCAG CATCTTCTTTaaagaaacgaaagaaaaagaaaaaacgatcaaaaagCGAA GCTGGTAAGAATTTCATTTTCGTAATCTCTAAAGTTTCCATCCTGAAGAA AGTTAGTTGAATCGCCACCTTTTCAATCAGAACATTAAGCCTTATTCAGC TATGGTACACAAGTGTTGAGTCCCGTTGAGTTCAAACCTTAGTTGGGAGT AACCACAAGAGCTCAATGATAATCGAACATTTTCTGAATCCAGGAAGGAA TCGTTTCGTCTCACTACTTTCAAGTTAGTTCAATGCTATGAATAGGGAGC CTACTTTTAATTACTCTGTaacagagtgtatctcacgtttatcgcttcgt agtacctCTGtccgcattgtctgtttgataaaaaaagttcCCGTaaggag acctctgcgatgaagtatgatttataaaatagcaacacttctctcaacat ctcccctctctcaccaacactccatcgcagaggtcggtttgaaaaatttc aagtgagaaaagacaatgacaacagaccctctacggcaatgaatttttta GCGTAGATTCGCGTAGATACTgagtctgtgtacagacaaactttgggaca agctggagattttacaagctcttatttgatttggttggtcgttaagatgt aataaaagaatcttattactttttctaaagaacgcgtcatctctatcact ttaaatgaccaattagtgaagtatcttgtaaaaactccagctcatcccca aACTTTTAGTCTTCTCAggctaaattttatttgctctattatgatttttt gaagacACAGTGAAGTAACAACGTCATCTAGTATAATAATTTCTAAAGTG GCCACCAGCCTGCGGTCAAATTTACCCCCCTAAGCTGAAAGGGGGTTGCA TTCTACGTACTACTGACTATTTTCGACCATTTCTTCACTTTGTTTTCGTT TTAGTTCTCCAAGAGAAGAAAAAGGACAAGTGGGCAGATTACGCCATGCA ATACGCCAATGATATCGAAATGGAGGGCGGAatacagaaaaaagataaat ggGATAGCTACGTTAAAAACTGTATTGAGGCTAGTGAATCACCACTCAtg aaaaaagctgaaaagaaaGCTggaaaacaaactttaaaaatgaCATACTC GACAGATGAGGATGATTCTagcgaaagcgaaagtgaaagtgacaATAGCG ATGGTGATTCAAACAAAggtaaaaagaagaaacaaaaaaagacgaagaag aagaatGAGAAATCTACTAAAGGAAAAGGAGAAGAGAAGgaacaaaaatc aagaaaattatcaaaaaatgaaatgaaaaatatgttcGGGGACGATCAAG ATActtctgaaagtgaaagtgaaagtggttcAGAAGACGAGGGCGACTTA CATGCGCGATTATTAGCGAGCATGGAGAAAGATGTTATTCCTGAAGAATC GGAAGAAGACTTGGTAACTTCACGGAAGCCGAAAGATAATGACATTGCAA AGACTCCAGCACCAGCAAAAGCAGAGGAGAAGCCTATGGTACCGACGAAA AAGGAGAATCCGAAACAAAAACCACCAGAGAAAATAACAAACGAAGTCAA ACCCAATGTACCGGTAACCGAAAAGCCGAAACCAAAGCAAAGTGAAAAAC CCGCTCCGAAAACTAAGGTAGAGAAAAAAGACAGTTTAAAAACACCGAGT GAAGAGACCACTCAAAATAAGAATTATCAAAACGGGCCTGTTGTTGATTT CCATGAACAGATACGGAAGATTAGTACTGCGCATGGTCCGCAAGCACCTG ATTTGTCTCAGTTAGACATACCAGAGAAACATAGGACATCGAGTCAAAAT GAGGACGATATTCATAATACTATAGATGACATTTTGAAAGAGGAGCCTAA AACAGGGTCCAAGAGTCGACGTGGCTCAGCGAAAAGACCAATTTCGGCCG CTAATTCAGCGACGAATGTCATGGCCGAGGGtcctgaaaatgaagaagag aaaaTGAAAGCTTTAGAAGAACATATATTGGAAAATCATGGAAAACATAA ACAgaaagatgaaatgaaaaagaaagggTCCGAAATTGATGATTTAATAT CGGAATTGAATTTGGATACGTGATTGTTATTATATAAATCCGAGTTGGAG TTTTCGATacaaaacaagaaacaaaagaatAGCGCAACCTCGTTCccgtt tatcaaaaaaaaaaaacaacctatGATTGTTCGTTTTGGATATCAGAAAG ATTTGACGGACTTTGTCTATGGTGGACCCCAGAGATACAGGATATAACTT GTTTGTAGTTTTTGGCCGAAATTGAAACATTTACGTTCTTATAAAGATGT GTGGCTTAAAATCTCCTGGCAAAGATAGATAACCTTAAATATACAGAtta tataatttaaaaaatgcaTTCACACGAATTATATAAAGCCTAGAtatcaa taatttttatttcattagcTTTAAACACAGTGTTTCACTGTATGTATGTA AATATAGCGACATATGCTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067796TCONS_00067796Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00067796-proteinTCONS_00067796-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_476supercontigscaffold_476:40740..44758 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.02 0 2.66 1.54 1.02 1.29 1.5 3.51 1.84 0.62 6.19 4.14 0.19 0.28 0.11 0.42 14.81 13.07 1.04 0.9 0.61 0.73 1.3 2.6 0.14 0.1 0.02 0.02