XLOC_042478 (gene) - C. hemisphaerica

Overview
NameXLOC_042478
Unique NameXLOC_042478
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_478:564806..567050-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042478 ID=XLOC_042478|Name=XLOC_042478|organism=Clytia hemisphaerica|type=gene|length=2245bp|location=Sequence derived from alignment at scaffold_478:564806..567050- (Clytia hemisphaerica)
TGGTCGACCGAACGCCATCATAGAAAATTATGAAGTTTTCAGTGGTAAGT
TTGAGATTTCTTTAGGCTCAGATGAAAGACTTATTCCCCAATGGTGTATA
TGCTCGAAAGGCTACAATCATGGTCAGAATATGTTGAAATTCTGGGTATT
ATAGGATTTTGTAGAATTAAAAGTTCCGACGAGAATGACATTTTCAGGCT
TTCTTCTTTATCTAATCAAATATTTCGATTTGGGAGGGGTACAGTGGCTT
CCAGTACTATATTCTCAGCCTAGTGAGTGGGACCACTCCCAAGCTTTTGG
ATCCTCAGATCCTAAGGTCCTATGATGGTGGTAATGTTAAAAGTGATCTT
ATGACAATTTTTAGTATTCAATTCAAAGAAATTTTACGGATAAGACCTTT
TCAAATTTCTATTGGGACTTAATTTGGATGACACTCAAATCCACGAAAGA
CACGAAATTTAAAGTATCAAAGTCTTCGTTTCATCCCATAGGACTCTCCA
AAGGCTTTTTGTTAGAAACAATCCCTTGCTTATCAAAACAATGGCGTTTT
ACATTGGTCATCAAACCCACTGGAATCTATAAGCCCTGGTATACAAACAT
CATGCAAGCAACTATCGGGGAGAGCAATTCCAAATATGGTGATCGTGTTC
CTTTAGTCTCCTTCAGACCAGATTCTACTAAACTTCATGTTTGTTCGGCT
ATCAATGGCAAGGTATGTAATAGTCTGAATCTGTAGATATACTTCCTTTA
CATATATAAGAAACTCTTTTCGCTAGAGTTCGAGCAGAAGCCTATAGATA
TGTACAGGAGTTTTATTTACCCCCTGCATCAGTAAGATTCTCGAATGGCA
GTAAATCGGACACAGTTTAAAATAAGCGAATATAAAATAAACGGGACAAA
ATTGTTGTCAGTTTGAACAGAATGATTTTATCTCGTAACAACTATCGCGT
AAGCATGTTACATGATAGCGAGTATGTCACTAAAAACCATTCAATCCGGA
ATGTTAATTGCGTAGAAAAAACGTGGGTGACGTCTAGTACTTTAGGCGTA
CAAACTTTCGCGAGCAGAAACTTTCGCGATTTTCGCGAATTTTGGCCCTT
TTCGCGAAAGTAAATGTATTTAAAAATTCTAGGNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCGAAAGTTTATGCTCGCGA
AAAATTCTTGAAAAAATAGAAAATCTGTAAAACTTCAAACTTTGAATAAA
ATGTAACTTTTATGGTACTTTTTTGCCTGCTAAAAGACTAATAAGTCAAA
GGACAAATGTTTCAAGACAATCCAAGAAGTATTTGTCCCTCCAAGCCATT
TTTTCATGTGAAAATTCTCAATTTTACGTCTTGATTGGCGAAAGTTTATG
CTCGCGAAAAATATTTTTCCGTTAAATTCGCGAAAGTAAATGTCGTGAAT
TTTGCGATTTTTCGGCCTCGCGAAAGTTTCTGCTCGCGAAAGTTTGTACG
CCTAAAGTATAGGCTAGTTACATGAAAATGAAAATTTTGCAGTAAACAGT
TCTTCTTAAGATTACAATTATGCGGTAGTTTTTTCCTGAACTAGCATATT
TCCTTGAGAATGAAAAATTGAAAGTGTCCGAGTTTTGTGTTCTAAGAGGT
TAAAGTAAAATTTTGCCTTCAATCTTATTAAATATACCCTTAACGTATAA
TCATAGCCGGGAATCATAGCTTTCTACAGTAGCCTATACAAGGGGGCGCA
AAATTTGTGTAGGAGAGCAATTTTTATGACACAGCAATTATCATTTCATA
TTATGAAAAGATAATTACAGTGTCATAAAAATCTCCTCTCCTACACAAAT
TTTGCGTACCTCCTGTCTACGCTACTGTTCTAGATATACTTGGAATGTAT
ATAACAATTTTTTGAATTCTAAATTTCTTCATCTTTTTAAAGGTCAACGA
GTGCAGAGACGATGATGAAGATCTTACCATGAATACAGATTCGACAGTTA
TCGTGGAACAAAAACTCATCTCGGGTGATTACTACTTTAGCGTCAAAGTC
AATGGCGTTGATATGTTCCCCCCATTCAAAAATGAGGGTGCCAACGAATT
CAAGAATGTCAAAGTCTATACATCACATCCTTGGAGTGAGCCCGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00068043TCONS_00068043Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00068043-proteinTCONS_00068043-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_478supercontigscaffold_478:564806..567050 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.4	0.31	0.15	0	0.29	0.18	0	0.12	0	0.83	0	0.82	0.09	0	0.75	0	0.21	0	1.07	0.13	0	0.31	0.29	0	0.79	0	0	0	0.31