XLOC_042480 (gene) - C. hemisphaerica

Overview
NameXLOC_042480
Unique NameXLOC_042480
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_478:587026..595929-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042480 ID=XLOC_042480|Name=XLOC_042480|organism=Clytia hemisphaerica|type=gene|length=8904bp|location=Sequence derived from alignment at scaffold_478:587026..595929- (Clytia hemisphaerica)
CCTTAGACTGTAAGAAAGTAAACAAAAATAAGATAAAAGAAAGGACTTTA CGCAATGACTGATGTAAAACAACCCATTTTGCCATCTAAATGTTCACCAC GTGGGCGTGGGCGGATGATGAGTAGAGGGTGGTTGGAAGATTTCAAACCG AATCCGCCCCCTTTCACGGTAGAGGAATTATGTAAGTTTTTTTTGTTCAT TATTTTGACATGTAGCACACAATGTTGTCTGGACATGTGTTCTTATCTGT GCCTCCTAACCTTTCTCAAACGAGAACTTCGGTTTTTTCGTCTTATGGCT GGCAAAATATCCTTTTGTCGTTGCTAAAAGAAACGTAGAGCAGAATACTT ACCAGAAAATCTAATTTCACTGAAAATTATTAATTAGTCATGTTGTTAAC GCGAATCGAGCCGTTCTGTTGATTAAAACCATCTAACAATATTTGAGCCA TTGTAATTTTCAAAAACCCTACCTTTTGCGTTAATAAATTGTGTTACTTT TTGTACCCGCACTAAATACCTGAGTCTTTTTGCCAAATCTACTTTTGGTT TTAACTCTTCTAGAGTTTTCTACGAGTTCAGACTTTATCTCACTTCCCTA ACATAAAGTTATAAAAAAACTTCAAAAAACTCTTTCTAATTCGAACCTCT ATGATTCGAATCTCTATGATTCGAATCTTTCCGTAATTCTTCTCGTATTG AGTCCAATCTCCTTCTGACGTGAAAAACTTTACTTTGACTTTCTTCAGCT AAATCATTGAGCGAATACTCGGACAGTATCAAAGATTACGCCTCTAGTAA AAATCAAACCATCAACACCATTATTCCAAACACTACACCATATGATGAAA AACCACCCACTCAGAGCATTCAAGGTTTGTCAGGTTTTTATAAATACAGT TGACGCTCTTTAAATTCGGTTTTTAAGGGAAATCGGATATTATCGAATAA TGGAGTATATCGAATAGTAGAGCGTCGTTTATGAAAGTTTCTTGTTGATG GTGACTTTCAATATTATCGAAGAAGGGAGTGTATCGAACAGTTGATTGTC GTTTATGAGAATTTTTTGTTGACGGTGACTTTCAATATTATCGAATAATG GAGCGTATCGAATAGTAGAGCGTCGTTTATGAGAGTTTTTTGTTGACGGT GACTTTCAATATTATCCAATAATGGCGCGTATCGAATAGTAGAGCGTCCT TTATGAGAGTTTTTTGTTGACGGTGACTTTCAATATTATCGAATAATGGA GCGTATCGAATAGTAGAGCGTCCTTTATGAGAGTTTTTTGTTGACAGTGA CTTTCAATAATTATTGAATAATGGAGCGTATCGAATAGTAGAGTGTCGTT TATGAGAGTTTCTTGTTGACGGTGACTTTCAATATTATCGAATAATGGAG CGTATCGAATAGTAGAGCGTCGTTTATGAGAGTCTTTTGTTGACGGTGAC TTTCAATAATTATTGAATAATGGAGCGTATCGAATAGTAGAGTGTCGTTT ATGAGAGTTTCTTGTTGACGGTGACTTTCAATATTATCGAATAATGGAGC GTATCGAATAGTAGAGCGTCGTTTATGAGAGTCTTTTGTTGACGGTGACT TTCAATAATTATTGAATAATGGAGCGTATCGAATAGTAGAGCGTCGTTTA TGAGAGTTTTTTGTTGACGGTGACTTTCAATATTATCGAATAATGGAGCG TATCGAATAGTAGAGTGTCATTTATGAGAGTTTCTTGTTGACGGTGACTT TCAATACTATCGAATAATGGAGCGTATCGAATATTAGCATCGAATTATTA AAGAGCATCAACTGTAGTTAGCGCTCTTTTTTGATTCCACATAAGTTGAA CGAAAGATAAAAAAATTCTCCATTAGGATCATACGGTAAATGTGCACATT CTTTGGCAAACGAGTTTTGTTTGATTGATATTTCGATCGTGCAAATTGCG CAGTATCATAGCAGAGAAATAATTCGAAATCACTGTATTGAATTTGCCCC ATCTTGCGCAAAAGTATTGTACATTTCAAGCCCTTCACTTAATCAGGAAG TTCAGACAGTTAATCAGTGTCTCTGGATACTGAAAAATCTGAAGTTCGTT TCTGTCTGAGACAAGAATCCTTGCTTTGATCATTGTTTGATGTTATTCGT TTATACGACACAGGTGACACATCCAAAACGTTTCGTAACATTCTTCAGAA AGCAGTCAACGCCAACGTGTTCGTACCAACGGCTTTCAATATACCATCCT ACTCTGAAGATGAGGCAAGCATACCAGATGAAAAACCAGCTCTCCATAGG TATCTATTCATTCCTCTTCATTTTTTGTCAGATCTATCAAATTCCGTTTT TTTTTAGCTTTTTTAAAAAAAGTAGGGACTTAGGGGTGCCGAGTTTTATA CATTAAATCTGCATTGTATAGATCATTTTTTGTGACCTTAGCCAATAGTA GACGTATACACGGCTTTACGCAGCAACGTTTATTCCACTTTGCGACTTTT TCCATTGTAATTTTCGATGGGTTCTTCCAGAAAAATACTACCCATGTTGT TGAGGATGTTTTTCTTCTGTTCAGGNGCTCTTCATTTTTTCAAAGATCTA TCAAATTCCGTTTTTTTTAGCTTTTTTAAAAAAAGTAGGGACTTAGGGGT GCCGAGTTTTATACATTAAATCTGCATTGTATAGAACATTCTTTGTGACC TTAGCCAATAGTAGACGTATACACGGCTCTACGAAGCAACTTCTATTCAC TTCTATTTGCGACTTTTTCTAATGTATGCCCCTTTCCTTTGTAATTTTTG ATGGGTTCTTCCAGAAAAATACTACCCATGTTGTTGAGGATGTTTTTCTT CTGTTCAGGGGTACCCTCGACAAACCTAAATAAATACAGTCAATATAATC AATAAAAATTTTGAAAATCTAGGGGAAGTCTCCAAAGTTGGTCCAAGGAG GCATATCAAAATTAACTAAAAATCCACGGGGGTTTCTAAAATCTAGTTCA GGGGGTCACTTTTTTTGATAGCGTAGTAGTACCGAAATCATCACAATACC TTCCTGTGAAATTTATACGTGAGGCTCACTAAAGCTCATTTTATATAAAT CCTGGAAACAGCTTCCCAATCCTGGCCAAGCAAAATCTTTGATCGTAGTT TTTTTGAAAAGTGGTAGCCTAAAGGTTTTTGATCGAATACTTGTGATGAT GTAGTTCCTTTTATTGGAGTTAATTCAACACTTCAATGGCTTTTCTTCGA ATACCACTTCCAAAGAACTCCCATCAAAAATAGAGAACATAGCTCAGTCC AGGATGTCTGAGGCTAATCTAAGGCTAATCTAAGGCATGTCTTTTTCTCA CCAGGACCAACAGTAACAGCAGTTCACCTCGTGATTTTCTCCGACAACTG TCCGATCATTCCGATGATGAAAAAGCCGAAATCTTCCTACAAGATTACAT TATGACGTTAACAGAAAACCCTGGGGAATTCCAAAGTATCATAAGGGAGA TCTCACCGTCGCTGTCAGAATTGAAATCAGAAGAATCGGTTAAAGCTATT ATAAGAATCATTTTCGACCATGTAAGTTTTCTGGAAAGCATCTCTTAAGT GATATCACACAGCTAGTTCCCTCCAGATCAATATTTAGGTCCCCTCTTGT TCGACATTCTAATCATTAACCTTCACCTGTTTTTAATGAATGGACGCATT ACTTTATGCCAAAACAAAATAAACAAATGTAGTTTTTGATTCTCGCGAGG CAGGAAGGGTAATTTCTTTTGTATAATAAATGCTGTGGCAACGAATGTTA GTTGGCCCAGCGCTAGCGATAGGGCCTTTCATTTGCAACTTTCCGTCCGT TGCGTCCTTTCGCTGTCTGTCCGTCCGTTTTGGTAGAAACGGCGCTTGAA ACTATAGTAACACACTTTTTAATTTTGCCGTTTGGAGAGGGAAAAGGTTG CTAAAGTCGGNTGTCGTTTATAAAAGTTTCTTGTTGACGGTGACTTTCAA TATTATCGAATAAGGGAGCGTATCGAATAATAGAGCGTCGTTTATGAGAG TTTCTTGTTGACGTGGACTTTCAATATTATCGAATAATGGAGCGTATCGA ATAGTAGAGCGTCGTTTATTAGAGTTTCTTGTTGACGGTGACTTTCAATA TTTTCGAATAATGGAGCGTATTGAATATTAGCATCGAATTATTAAAGAGC ATCAACTGTAGTTAGCGCTCTTTTTTGATTCCACATAAGTTGAACGAAAG ATAAAAAAATTCTCCATTAGGATCATACGGTAAATGTGCACATTCTTTGG CAAACGAGTTTTGTTTGATTGATATTTCGATCGTGCAAATTGCGCAGTAT CATAGCAGAGAAATAATTCGAAATCACTGTATTGAATTTGCCCCATCTTG CGCAAAAGTATTGTACATTTCAAGCCCTTCACTTAATCAGGAAGTTCAGA CAGTTAATCAGTGTCTCTGGATACTGAAAAATCTGAAGTTCGTTTCTGTC TGAGACAAGAATCCTTGCTTTGATCATTGTTTGATGTTATTCGTTTATAC GACACAGGTGACACATCCAAAACGTTTCGTAACATTCTTCAGAAAGCAGT CAACGCCAACGTGTTCGTACCAACGGCTTTCAATATACCATCCTACTCTG AAGATGAGGCAAGCATACCAGATGAAAAACCAGCTCTCCATAGGTATCTA TTCATTGCTCTTCATTTTTTCAAAGATCTATCAAATTCCGTTTTTTTTAG CTTTTTTAAAAAAAGTAGGGACTTAGGGGTGCCGAGTTTTATACATTAAA TCTGCATTGTATAGAACATTCTTTGTGACCTTAGCCAATAGTAGACGTAT ACACGGCTCTACGAAGCAACTTCTATTCACTTCTATTTGCGACTTTTTCT AATGTATGCCCCTTTCCTTTGTAATTTTTGATGGGTTCTTCCAGAAAAAT ACTACCCATGTTGTTGAGGATGTTTTTCTTCTGTTCAGGGGTACCCTCGA CAAACCTAAATAAATACAGTCAATATAATCAATAAAAATTTTGAAAATCT AGGGGAAGTCTCCAAAGTTGGTCCAAGGAGGCATATCAAAATTAACTAAA AATCCACGGGGGTTTCTAAAATCTAGTTCAGGGGGTCACTTTTTTTGATA GCGTAGTAGTACCGAAATCATCACAATACCTTCCTGTGAAATTTATACGT GAGGCTCACTAAAGCTCATTTTATATAAATCCTGGAAACAGCTTCCCAAT CCTGGCCAAGCAAAATCTTTGATCGTAGTTTTTTTGAAAAGTGGCAGCCT AAAGGTTTTTGATCGAATACTTGTGATGATGTAGTTCCTTTTATTGGAGT TAATTCAACACTTCAATGGCTTTTCTTCGAATACCACTTCCAAAGAACTC CCATCAAAAATAGAGAACATAGCTCAGTCCAGGATGTCTGAGGCTAATCT AAGGCTAATCTAAGGCATGTCTTTTTCTCACCAGGACCAACAGTAACAGC AGTTCACCTCGTGATTTTCTCCGACAACTGTCCGATCATTCCGATGATGA AAAAGCCGAAATCTTCCTACAAGATTACATTATGACGTTAACAGAAAACC CTGGGGAATTCCAAAGTATCATAAGGGAGATCTCACCGTCGCTGTCAGAA TTGAAATCAGAAGAATCGGTTAAAGCTATTATAAGAATCATTTTCGACCA TGTAAGTTTTCTGGAAAGCATCTCTTAAGTGATATCACACAGCTAGTTCC CTCCAGATCAATATTTAGGTCCCCTCTTGTTCGACATTCTAATCATTAAC CTTCACCTGTTTTTAATGAATGGACGCATTACTTTATGCCAAAACAAAAT AAACAAATGTAATTTTTGATTCTCGCGAGGCAGGAAGGGTAATTTCTTTT GTATAATAAATGATGTGGCAACGAATGGTAGTTGACTCTTTAAATGATGT CCTTAAAGGCCCGACTTTGTGTGAGTTTTTGAAAACATTGGTAACGTTCT CTTGTTTTTTTATTCGCCTGATTTCATTTTCAAATATCAAAAAATTGTGT CCATAGAAATAAAGTCCCCACTCTGACAGTACTTTTCAAACGTCTGGCTT TGAAAATAATTTTTTTCATATTTCTTCCAGGCAACGAACAATACGAACTT TTGTTACACGGCCGCTCGGTTCTTCGAATATTTTGATCGAAAGAAAACGT TCGGGGAAGCGAGTAATTTCAGAAAAATCTTCTATACAAAGTAAGTAGTT TTCTTTTTACTCGACTCGCCTGCGTCAAAAGAAACCATCAGATTTTTTTG AATTGGCTCTTTAGCTTTGATATCATTTAATTCGCACCAGAAAAATATCA ATCAAATAAAAGGGATAGTAACTGAAAATGCTCTATAAAATAGTTCTTCT TTTTATCCCTTTCAAAACCAAATTTTTCGTTGAAAAAATACTTTTCTTTT CCAGCTTCAATAAAAGGAATAAGATTATACAAATATCTGGTCACTGTAAT GCTTTGTTTTAAAATGTAATGATCCGTGAACTACCTGACAGAAGAAATAG AAAAAGAGTTCGAGATGCCAATCAAAAATAAACCCCTGTTTTGTGACATT TTTTACTGTCCGCCACTAAATTGACCATAACTTGGGAAAATTATGTGGCA TACGATTGCTTTAATGGTTAAGCTGAGGAAATTAACTATCCATTGCATAA AGGGCGAATTTTTGTGGCTTACTTAAAGGGGAGTTACAAGCAAATGAAGT GTGGGGAAAAAATGTGGCTTACTGGTCATATGGCTTACCCTACCAAGAAA TTTTGAAGACTGCGTTCTCAATAATGGAAACAGTCAGAAATATACTTTCT CTTCAGCATTGACAGCAAAGGGCTAAATTTTTCATTAGCTGCACTGATTT GTGGCTTACAGTTTGTTAAGTGGGCAAAAATGATAGTTGAAATATAGGTG AAATTTTATGTCTCACATTTTTTAAGTTTTTGGCACTCAATCATTAAAGT ATAACACCTGTAGGTGTAAAAAATCACAAAAATTTTGTTGTAAGTACAAT TTTGTGGCTTACAAAGTCACATTAAAAATTATCGAAAAGTAAGCCACAAA AAACTACATTTAACAGCTAGAAAGTATGTACATTTAACATTTTTTGAAAA ATTCAACCTTTCCTCTGTCAAGTTAAGAAAGTCCCATTCTAAGATCTCTT ATCTAATTTGTGTGGCTTACATTTCTAAAAAAGATACAAATTTTGAGTTT AAGCCACATTTTTAGCTCAATTAACGAATTTTATTTATAATGTCTTAGTA TTTCCCACAACATTGTAAAATTTCAAGACTTATCGATTAAGACTTCGTCA GCTATGACAAAAAGTTGTTTTGGGGCATTTTTCAAAATTTCACACTATTT TTGATTGGGATCTCGAATAGCTAGCGGCGCGGCCTATTTTTGCTTTTTAT ACTTGATTTTTTTCCTGTGCATTGCGGTTTTATCTCGAAAGTCTTTCCAA AACTTTTTTGCATTATCAGAATGATTTGCTAAAAGCAAAATCAGGAGTTT AATAATGGCATTGGGCTGTTCCATTAAAAAAACCATACAGGGGGTGGACG AACCTTTTCAAGTCAAAAAAAATAATTATTGAAATGTGTCGATACCCCCT GGAAAATGACGACATTTGAAAAAGTACCCCTGGAAAGATTCTTTTCATAC CTTGATTAAAAGGGGGTTTGTACTTTTACGGTGTGACGGGATTGGCCCTT TTTTAGTACGATATTACGGGATTTGACGAAAAAAGAGACGAGAAAACGGT ATTTTAAAATCAGACGGTGACGGGATTTAGGTACAAGCCGGTGTGACGGT GTTATTATTTTTTCAATTTTCGGGATTCCGGGATTCAGCAAAGATTTTGA CGGGAAAACGGTATTTTAAAATCAGACGGTGACGGGATTTAGGTACAAGC CGGTGTGACGGTGTTATTATTTTTTCAATTTTCGGGATTCCGGGATTCAG CAAAGATTTTGACGGGAAAACGGTATTTCGAACCCCTACAAACCCCCCCA TTAAAGTGAGGGTGGACGAACTGAAATCAGTCTCTTAACCATTGGAAGTT TTTCTCGGAATATCCTCTGGAATTGTTCGTCCACCCCTCTGTATGGATAC AAAATGGAATGACCCATTACTTTCAGAAAAGAAACATTTTAATAACCTTT GTTTGCGTTCTTTATTTCAGATGTCAATCAGAATTCAAATGGTTGTCCGA AATTACATCGGGATCGTCCGAAATTACATCGGGATCGTCCGAAAGTCGAC CTTCAGCAAGTGATTACACCAAAATGACCAACATCGCTTTTTTCTTTGGA GAACTCTTTAATAATATGAAGGTATTTTGACGTCGTTTATAAATTACATA CAAACAGTTATAGGTGCTTTACAGCTATACGATAGCTGCTCCAGGATATT ATGGTTTGTAAACTTATAAATTTTACTAATTCCCCATATTGAAAGTTTAT CGTGGTTTGGATCGCGAGACTTACGATGGGCAACGTTTCGAAAGATTCCT TCTCCCATCATCGGGCAAGATGGAAGATGATTTCTCCACTATTTGAAGCT TCAAGAAAATTCTAAAAGATTCGATAATATCTACAATACACCTGCATTAA CTAAAGATTGCACCAGCATAAAACACCGTGTACCAATTGTATAAGTTAGT TCTTTATTTCTTGATAATGATAATTTTTGTATCCTCTCATGTACTTATTT TTTTTCTCAAAGGTCCAAGACAAACCAAATGCAATTTTCAAGAAATGTGT TTTCGATATNCGACGGAGCCCGATTTTCGATAAAAAAAATTTTTAGGCAA ATTTGGGCCGAAAAACGGCTAAAAAACAGGTTTTTTGGACTTTGTGAAAA ATTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00068048TCONS_00068048Clytia hemisphaericatranscript
TCONS_00068047TCONS_00068047Clytia hemisphaericatranscript
TCONS_00068046TCONS_00068046Clytia hemisphaericatranscript
TCONS_00068045TCONS_00068045Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00068045-proteinTCONS_00068045-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_478supercontigscaffold_478:587026..595929 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
52.04 48.2 14.29 11.98 21.97 18.57 16.35 18.33 16.92 17.65 19.67 13.81 19.2 22.24 20.51 21.38 26.06 26.04 15.37 15.26 17.18 19.75 43.42 41.04 29.86 30.95 8.08 8.48 25.05 26.7