XLOC_042505 (gene) - C. hemisphaerica

Overview
NameXLOC_042505
Unique NameXLOC_042505
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_479:22678..27722+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042505 ID=XLOC_042505|Name=XLOC_042505|organism=Clytia hemisphaerica|type=gene|length=5045bp|location=Sequence derived from alignment at scaffold_479:22678..27722+ (Clytia hemisphaerica)
gggaattgaatgacaaattttggttggttgattttggcttatatgcacgt tttattttgtttcaaactttcaagttttaattaattgtcttgcgaacttg attcaggcaaatctcatccttgttgttgcaaatataCATCCTGTaaatga ctgatgttgttttttcttgaagctagatttcctagtgtgactaactgttt gaGACTGAaacataccgtaagttggtctaatctcgacatccgtcttctaa tttcgacacccttctttagagataggaataatatgaaagtcggAATTGgt tattaaaaaaagatttttcctcccTTACCCCtaagcaaataaaataattt tgaccttttcttaatttttcagctctagaaaaagggtgtcgaatttagag gagggatgtcgacattagaccaagttaccgTATCAATGATTGAGAAGAGT TAAAGTTTCGCGTCAACTCAATGGGGATGACAACTtccgaaaaaatgaag aagttatataaaaaatatgttcCCTTAGCGTCATAAAACATCCCCAATAT AGTCGGTCAGTAGCACattttgtcggatttttaaTATCTAATAAATCCAG AAGATTCCTGTCGGCAAAAAACTCCAATGAAATGCGTTGACCTTAAAACT GGATCAGATTTTCCGCCCTTGGGTCCCAGCTCTATCACGTCAGTGAATTT CAAGTTGACAATTTCAATGAGGgtggatggaaaaaaaatcaaatgagact caatgtgggtgaagtaaacaaaaacttgaagcAAATGATGATGTAGAAAA GGGCTTAGCTATCAAAAAAGTTATTCCGACATTATTGTGACTGGGCCCCG ACTCgggatttatgttttgaaggtgagtTGGTTGGGCAAGAAAATAGTTG GATAGAATTAACAGAGGGTTGGACTAGAGgtataatcaaatcaatgaaTT GGACCAAACGGAAAGCAACCACTGGAAAAGTTGAACCATCGAAACAAGTT TTTGGATGAAGAACGTCTGACATatcagaaaaaatatcaacaactGTACA CAAGAACGATATTCCTAAAAGTCTAATTGTAAATCTAAATCAAACACTGT TATCATATGTTAGTCCAGGAAAATACACATTTGCTTTGAAAGAGTCAAAG ACCGTTCCTGTGAAGGGTATCAATGATAAACGACAACAGAAACACAAAAA GATGTTAGCCCAAGTATCAGTTCCCTAAGGAATTTGACGTTacattttca gaaaatcagtGCTCAACACAGAAATCTGTcagcttttttgaaagtgttaT TTTCCCATATTTCAAAAAAGTGCGCAGAGCAGTTGGCTAGCCAGATGAGC AAAAGAGTCTTGTTATCATGGGCACCTTCAAGGGGCAGGATTACGATGTT ATCGCCaaactttataaaaaaagcattgtCTGCTCGTTAAAAATATGGAG ATTTGatgtttcacagaaaagtgctaccaaggggtattttggGTCCCATA TCTCCCGAAGGACTTTttcgtttgccttgaaatttgacaatctTCTTAAC CTAAGATTGAATTACCACTGATGTAAAAATGAACTTAGTatcgaaaatag aaaaaaaaaatttgcaatcgAAAATTTAACCGCttaaaatcgcaaaattt tcagccaaaagcattcaaatatagcgcttttgattcgctaaaacaagcaa aagaaTTTCCGCATATTTCATTCTAAGATTGAGTTTTTTTGGCATGTATA CggacataaaaaagtgctttaAAAATCCTTAGTAGTGActgaattttgtg tttttttttgctttcagaATCAACAGAACAAATTAGAGGAACATGTTTGG AACATGTTTTCACAACAGAGCCAatgacagaaaaatattttgaacttgta ttcacaacaattcactcaacatgctccattttttataaaaagtgaaaccc tggcattcatttgcttagaccgagcatagcagtgaatattgtgtttacat gctttcagaatgaacagagccaatgacgggaaAATAATCTGAACTTgttt gtattcacgacaattgactcaacatgctccattttttataaaaagtgaaa ccctggcattcatttgcttagaccgagcatagcagtgaatattgtgttta cNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNaaaaagtgaaaccctggcattcatttgcttagaccgagcat agcagtgaatattgtgtttacatgctttcagaatgaacagagccaatgac gggaaAATATTCTGAACTTGCTTGTATTCACGataattcactcaacatgc tccattttttataaaaagtgaaaccctggcattcattccttagaccgagc atagcagtgaatattgtgtttacatgctttcagaatgaacagagccaatg acatAGAAAAGATAATTTCTAGCAAAATTTAACTTGTATGTTGTTAGAAA TTATCTTTTCTATTTCATTCTAAGACTGACTTTTTTGGCATGTATACGAA CATAGAAAAGTGCTTTAAAAATCCTTATAGTAGTGActgaattttgtgtt ttttttttgctttcagaATCAACAGAACAAATTAGAAGAACATGTTTGGA ACATGTTTTCACAACAGAGCCAatgacagaaaaatattttgaacttgtat tcacaacaattcactcaacatgctccatTTTTTATAAAAAGTGAAACCCT GGCATTCATTTGCTTAGAccgagcatagcagtgaatattgtgtttacatg ctttcagaatgaacagagccaatgacgggaaaatattctgaacttgcttg tattcacgacaattcactcaacatgctccattttttataaaaagtgaaac cctggcattcctttgcttagaccgagcatagcagtgaatattgtgtttac atgctttcagaatgaacagagccaatgacggggaaatattttgaacttgt atttaCAACAAACAATCatcaataaatcaaaatgtATGAGCTTACGTGGC AGTGATGTCATACTCCAATACACCACATTATCATAGATTTAACGTTGCTT CAACACCAAATGTGAATCAGCAGATTAAAGACATCGGGCTGCCAAGTCAT GACGTAATACATCACCAACAATGTGAATAAAATCAGACATCTTTTTTAAT AAACATTCAAATGAGGGACAAAATTCCCTCGTTTTTAATAATAGAGCGTT ACTATAAAGAGTTGACTCAATATCTTTGTAACAAAGATATTGAGTCAAGT TTTTAATAATATGAATCTTCTTTACATCAAACTTCTTTACAAAAACACAC AAGCAAAAGTTCAATCTCCTGATGGAGAAACAGAAGAATATTCCCCCTTG CCTTGGAATCTTGTGGAAAAACATTAAAGAAACTCACttccaaataaaaa ataagttagttatctcaaagaaaataatttggatTAATTTGTTTGACTCA ATAAGTACATCTTTTTTCTAGTTATTTTTCAGAATAATGATGACTGTTCg aaaacaaaaacaccaaaGGATAGTACAGACAACGCAAAAGACACAAAGAT CGCTATCTACATATTCTGGTCAAGATGACAATTTTTGTTGGGCTCCAAAA AGGATTAAAGGAAAAGTTGATCTACAGTAACTAATTTATGTTGAATTCTT TCTTTACATTTAATATATTAGTACCAGATTACCCCTTTGTCATTgctatg atttattttttttgctttagttTTTAATAGGTGCCAGTGGATCCCACTGG GTTATTTTAACCATTGTTTGCAAAGATTTTGAAGCCTGAAGACTCAACTC AAGCACTACAATCATCAATAAACGAAAATGTAAAAGCTTATGTGGGAGTG ATGTCATCCAATACATCAGATTAACACAATTTCAATGTTGCTTCAACACC ATAATGTGAATCAGCAGATTAAAGACATCAAATCGACATCAACATTGCAG CTGTCAAGTCATGAAGTAATACATCGCCTACTACTTACTAATTGGTTTAC TCTCAAGAAATTCAGATAGAATATGTTCATCTGACCCACACAAGGACTTC TGTACAGAATAAATCCCTTTTTCGTACGATGTGAATGAAATTAGACATCC TTTTCATCTTATCAAAATAACAGTCAAATGAGGGACAAGTCAAGATTCCC TCGTTTTTAATAATACAAATCCTCTGTACGTTAAAAATGAGCTTGCTAGA TTCAAACCCGTTAGTATAGAAATATTAGGCTTAGTCTGGCTTAGTGATTA TGTTAGATTTGTTTAAAGCAAATACTTATTTATTTCAGGTTCACACTGGA CCACACAGCAGAACGTATTTGCAGTACACTTGTATcaagaaaactttttt gcaGAATTCCACATTTGGAAGATTCCGATGATACAACCATCTCATCCATA CTTTTAGCTAAGACAAACGTAATATTTGGTAAGAGGTTTTTATACGCCAA CCAGTACTCGTGAAATACATGTCTGTCAATGTTGAGTAGGCttaaaaata tgtttgaaatcATCTTAGACAAATTTGCATAGGGTGCAGTGCCTCATGCG AATCAATCTGATGTAATGAAATGGTACTAAAATGTAAGTGGTTAATTAAT CACATCCCCAAACCTGTTCTTTTCTTTGTTCATAGCTTTTGATACAACGC TAAGTTTACCACATAGGgtaattttcaattatttcatggttttttgtttc aaaataaacTTCTGAAAGAGGTACGAATTAACACCTGAAAGTGCAATCAT AGATCGCGTTGGCggcgaaattttttatttttatggtCTTTTCCAAAAAT TGCGTAGGAAAGTAAAAAGATTTTATAGCATACATCTAAATAATGAAAAC AACtaataagatttaaaaaatcgtCCTTGTGTTGAAAAATTATCCATacg tttaaaactttttttttggaatgtCAAGGTAAGCTCAAGTAATTGAGTga tttttgatcaatttttttggCTTTGTCATGTCTTTAATATGGCCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00068078TCONS_00068078Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_479supercontigscaffold_479:22678..27722 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.2 2.57 0.96 0.81 3.72 3.07 3.67 4.76 2.55 1.52 1.58 1.47 0.96 0.84 0.59 0.81 0.54 0.63 0.7 0.87 1.03 0.81 0.67 0.83 2.16 3.79 1.01 0.79 0.6 0.51