XLOC_042512 (gene) - C. hemisphaerica

Overview
NameXLOC_042512
Unique NameXLOC_042512
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_479:14185..18560-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042512 ID=XLOC_042512|Name=XLOC_042512|organism=Clytia hemisphaerica|type=gene|length=4376bp|location=Sequence derived from alignment at scaffold_479:14185..18560- (Clytia hemisphaerica)
GTTCACTGCTAGGGTACACCATTTTAAAACGGGATTTTTCGCAGTCCTAG CTACCAAACCGAGAAGATTTTTGTGGCTTTAAGCCAAACCCTTCAAGGTC ATTTTGATAAAATCATCGGTTTGAAGATGTGATTTATATAGCAAATTTTA TAGCAAATTTTCGCTTGGGATAGAAGTTAAAGGTACGTGCACAATATAGC AAAACTGCTTCGCTCATAAATTCGCTTCGCAATAAAGCCGCTATAGAGAC AGGGTCATAAGAGCCTTTTAATGCCCCAAACACATTACATAATCCACGGT GGCACAACACCCGCCGCTGCGTCCCTGCGCATCGCTCTTTTGTTTTCCTT CTAGTTATTTTAGTGTAAACAGTGCCTTAATAAAATCAAACGATATTCGT CGAACGATCGAACATTTTTATTCGAATCACGAATCGTCTGTCGAAATCTA CGATGGCCCCTATAAGGCTCACCACGCACTTCCAGTTCTTATAAAATTTG TGAACTAGAACTGTCTAGGGTCATGGCCCAGAAGGCTCACAAGACACTGG GCACTTCCGAGTTTTTTTGTGACGAGACTGCACTTCTAAAAATGTTTTAG AGACGCAAAAGTACCCCTCGAAAAGATAGCCCTTCTGGTCAGCAAAATAG ATACAGAGTTGTAATAAATGACAGCCTAGACTAATGTTAATTTTTCTTTC AGAAAAAAGACTATAATTTGTTTACCTTTTTTCCTGCAGCTTCCCAACAT CCAAGCTCTCCAACATCACAAGCCGAATGAAATTACTTTCAATTTCCCGT AGAAATTATGCGATGAAAAATCCGGGGGTCGAAGAATGAAGACTTATTAT TTCCGAGCAAGTTATCTTTGCTTATAACGAAATATTACTTTTCAATATAT ATTTGCTAAATATAATGTTTGATTACAAAAATACTTTACACTGTATTTAA AGTTTGAAAAAGTCGATTCTACCATTCTACTTAGCTCTTTGTTTTCATGT CTAGCCCTCGTCTCAAAAGAAGTCCCAGAATCCCGAGATGTTTGCAGTGG GGCGTTCAAAACAAAGGCGTTTTTATTTTTCCGCCCACTTAGTCACACTA GCGTCCCGCCAAATTGCGTATCAAAGATTAATGCTGCGAAAGCACTATAT CGTTTACTTGACTCTCAAGCAAGAAAATGCACCGCAAAACTTCTAAAGGG ATTCATGAAAAAATAACCCAGTGCTTTTTAATGAAATTAACATTTTCAAA AACTTTGAGAAATTGCCTAAAATTTGAGCCATAGATGAGAAAATTTGAGC CAAGCCAACCTTGAAAACTAATTTGAAGATCAACTTCCCAAGAAAAAGAT CTACGGGGGAGGTGGAACCCACCTAGATCTGCGCACTGCCGGATAGGCTA TCTCCCGGAAATTTTGCCGGACCTCAAACAATGACCCATTTACATGTGCG TAATTGTTTTTACTTTAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACAAGGCCTTAAAAATCG AAGCGCTGTCTCGGGAATTGAATGACAAATTTTGGTTGGTTGATTTTGGC TGCTGCACGTTTTATTTTGTTTCCAACTTTCAAGTTTTAATTAATATTGT CTTGTACCTCTTTGTACCTCTTTTTGGCTTTGGCTTGAACAGCTCGTCCA ACTCGTTGAGTCCGATGCTTCGACATTTCCTTGAGGCTGTTGGAGTCAGC TTGCCTAAGTAAGGTTAAAATAGTGGGCAAGCAGAGGTTCGTCCGGAACA GTTGTGAGGAAGGTGTCTAAGTGTTTTTTGAATACTTCTTTGGGGCAGTT TGACAAATCTCTTATTGGTCTGGGAAGGGTGTTGAATAATCGAGGGCCTT CTTGGGAAAGACTTCCCCTCCAGATATTTTTGTGTATGATATTGACAGCT TTTAGATTGCAAATTCTCCCCAATCTCTGATTTATATGGCAGGAAATGCC TCCTTTACTTTCGTCGTTGCCTTCAATGACATTCCAGGTATAAATTATTT GATACCGCTCTCTCCGTCTTTCAAGGCTATACAGTTTTAATGATTTGAGT TTTTCCCAATAATTGAGATGTCTGAGGGATGGAATTACATGTAAGAATGA TTTCTGAACTTCTTCCAGTTGCTGGACAAGACCACGCTTTCAGGGAGACC AGAGTTGAGAGCAGTAGTCCAAATGAGGGATTGCTAGTGCACTCCATAAA GTTATGCACTTATATTTTTACTTTTTTGATTTGTTCTTGGATATGTTTCT CATAAGTCAACTGAGTGTCTAGGGTGACTCCAAGGTCTTTAACTTCGTTA TTATTTTCGATTAACGTTGCTGTGTCAGAAAAATAGCGAGAACTTTGCTT CAGAGCGTCGTTTTTCCCGTAGGCAAGGTGCTCAAATTTAAGACCATTCA GCTGCATNNGTGTCTAGATCATTTTGTAGATGATAAACATCCTCCAGTTT GGATATTTCTTTCATCAAACGAGTGTTGTCAGCAAACGATGCCAAAATAG AATGAAGGATGCTGTTATCGATATCTTGAATCATGATCAGGAACAATAGT GGTCCCAGCACAGATCCTTGCGGCACACCTGAAATAACATCTGTTTCTGA GGACAAGTTTACTGAAACTCTCTGTGTTTGATGAGTCAAAAAGGATCTGA TCCATTCAAGTAGTTTACCGATTATGCCATTTTTCTGAAGCTTGTGTAAC AAAATGGTATGGTCTACTCTATCAAAAGCTTTACTGAAGTCTAAATAGAT AACGTCAATATTGTTTCCATTCTCTAGGTAATTCCAAAAAAATGTAGCAA AATTTTTGCCGCTAGATCTCCTTTAAAATCCGCCTGTCTCTTGGCTTGCG TTTCCTCTTGGATGAAAATATTTTTGAAGAGGTACATTATTTGAAGATAT AATGAATATGCATTGTTTGATAAAAGCATCATATTGGGCGTCAGGGTCTG AATCAAGTGGGTTCAAAATTTTGTGCCAGTCAGTGTCTTTGAAATTTTCA TTGATGATAGCCCAATTAATTTGATCATAATAGAAGTTGAAACTATCAAT CAGTGCACTGATTAAATTTTTATTATTGTTATTACTATAGTTGTTTTCAG TCATGGAAAAGTTCAGATGGCTTGTAACATCAATGATGAAGTGATCTGAG AGAGCAGTTGGTGTGCATAGGTATGAAGATTGAATCAGAGTTATTAGTCA GTAAGAAGTCTAAAATATTGCCATTAGAATGAGTAGGCTTATGGATCATC TGGTTCAAGTTTAAAATTGAAGTAAAATTGTTTAAAACATCTAGAAGTTG TTTGTTGCAACTAATTGATGGTATGTAAGAGTCATTTTTTTTGGTGTGGG GTATATTGAAATCACCACATAGATAAATATCGGGGGTATTTCCTTCGATT GAATCGATGATGTCCTGCATTGCTGAGATAAGGTCCAAGAATTCCGGAGC CGCTGATTTGTGCAGAATATTTGTTGGCTGTCTATTTTTATGTTCTTGCG AACTTGATTCAGGTAACTCTCATCCTTGTTGTTGAAATGTATCCTGTAGA TGACTGCAGTGTGCCCTAAATTATTTTGGTTTTGCTTTCAATTTCAAGCA AGGTCTTAGCAACAGGGCGGGCGTACATAGCAACGGGGCTGGGTAGAAAA ATCTAAACATAGAATTCAAAAAAAATACCGATCATCATATAAAAAATACC CCCTTTATATGTTTAGTTTGTTCTACCTTGGTTTATGACTGAAAATATCT TCAAAAAACCTTTGTCCGCTATCAGGCCGCGCAGTAATCTTTTGCCCGCT TCAATTAGCTAATGAATAAGAGAGGTGGGCTTAGCTAAGCTGTGCTCGTG GGCGATAAATTTACTTACTTACTTGGAATACTTGGAAGTGCTTTAGATGA TCTTCCATCTATTATTGATTTGATGTTTGATCGAGTTGGATGCAGCATTT GTTGTTGCACCTGGAACAGAAGGTTCATCCGGAACAGAAACAAGGAACTT GTCTAGCTTCTTTTTGAATTCTAGCACAGTGGCATCCACTTAAATTCCTC AATTCTTTAGGGAGGGAGTTGAACAAGATTGGCCCACAAGTTGATAAGAA TTTATGTCGGATTGACTGTAGGGCAACTGATGTTCCTGTGATTCGGGCTT TCACAAAGCACAATCTACCAAGTCTAGGTTGGAAAACAGATCGTAATTCG TCTGACTGGTTGATATTAGGCACAAGGTTTTCAAGGATCTTCCACGTGTA GATGATCATGTATCTTTCACGTCTTCTTTCTAGCGAATAAAGCTTAAATG CCTTCAATCTTGACCAGTATGATTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00068090TCONS_00068090Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00068090-proteinTCONS_00068090-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_479supercontigscaffold_479:14185..18560 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.51 2.65 4.52 4.58 3.55 2.91 2.87 3.33 2.22 2.32 2.33 2.76 2.04 2.36 1.46 1.62 1.61 1.75 1.76 2.1 2.57 3.06 1.03 1.32 2.97 3.3 2.99 2.87 2.27 1.75