XLOC_042546 (gene) - C. hemisphaerica

Overview
NameXLOC_042546
Unique NameXLOC_042546
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_48:234918..243980-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042546 ID=XLOC_042546|Name=XLOC_042546|organism=Clytia hemisphaerica|type=gene|length=9063bp|location=Sequence derived from alignment at scaffold_48:234918..243980- (Clytia hemisphaerica)
AAAAATTACAAAAGTGCTCTTTAGATTATATTATCGATACCGTCGTCGAA AAGAATTTCTCATGTCAATGTTTTCAAAGGCTGACTGCACTGCTATGGGT TGCGATAGGTGTAATCATAATTTTTTATTAATCATACATTTGTTTGTGTA TTTTCAGCTGAAATAAGTACAACAAAAAGAAACAAAATAAATAATATTAA TCAATGGATGTGGAACACAATGACAGCAACCAGAACGTTATGATGAATGG TGATCAAGAAAACCATTTAACGAACGGACATTCCATCGAAGATAGTGCGT TTGCTGATGAACCACTTTTAAATGGTCACCACGGTGACGCAACAACAAAC CTTTCCACTAGTCCTTCCAAACAAAAAGTCATCGATACTATAAGCGAGGT GATCAACGATCGATTATTAGAAGACAATTCGGCCACCTCTTCCATGTTAC TGACAGATGAGAAAGAAAAACCTGATCAAGACGTCGCTTCAACCATGCAA AACATTCTGGGGAAAGTGGAATCCACTCAAAACTCAGCCACCATCAGTCC GTCTCAAGCAAACACGGAGTCGCCGACAGAAACCTTATCTCCTATCTCAT CAACCAATCAATCCTTGACTCCTCTATCTGATACTTTTGATTCACCCTCG GAAAAAACTGATGTTTCTTCACCTTCTAACCATGTAGAAACGGTATCTCA AAATAACGAATGTCATGATAAAACAATTAGTAAAGACGCCATGAGTGGTG TTGTAGAGAAAGATGAAAGTCCTCTTCCGGAAGAACCAGTTTCTTCACCC AATGATTATTCTGGTGAGAACCATCTAAATATTAATGAAACTGAACTCGA CTCTGAGACATTAGTTATCGAAAGTGACTCAGTCCAGACTTCAAAAGAAA GTTCAACTCCTGAAGAAACTCTAGATAGTGTTAAGCAAGATATTGTTATG CCAGAGCCAACGGAACCGAATGACCCAAAAGAAAATATTCAAGAATCGAA GAATGAAATAAATGAGATAGAGAACGCTCCAATACCAAAGGAAAATACAG AATCTACCACTGAAAGTTTAATTAGTACTGAATCTGATGTGCCGACCAAC GCAACTGGTACAGATGAAAGTAATGAAAAGGAGGCGAAGAAACCTGCAGA GGAGCTGGATATGCTTGGTAATGGACTATTGAAGAAAAAGGTTAGTCTGT AACTGCAAACAGTTGTTCAACTTCAACCTAGCTTCTTTTTTTGAGATTTC ACTTTTTTTTAATCAAGTCACGATTTAGCAATGATGGTCTGATTGATTCA AACGGCACTACTTGCAGTTGGGAGGAATTAAAGTTTCCTTTTCCTTCCTT TCAGATTTTAAAGGAAGGCCTTGGGCGGGAGAGTCGCCCACAACAAGGCG ATTTGTTGAACATTCGTTGTGAAGGGAAGTTGGCTGATGGAACAGTTGTT GACAAACATAGTCATTTGCAATTGGTGCTCGGTGATGCTGACGTCATTCA AGGTAAACATTTTTTGTTTGTTTCCACAGTCTAACATCATTTTTTCTGCG CCACTACGAGAATACAGATGTATGGTCTGTAAAATGTAGTGTCAAACAGC ACAACTTTTTTGCAGGTTGTTTTATTAAAAAAAATCTTCTTCAACAATGA ATTTGGAAGGGAGAGGATCAGATTTTCTTTAAGTCGAGTATGAGCGTGTT CAGTTTTTATGTTCCTAATTCTGACTGAGTAAGTGTCGAAAGAAATGTTG ATATTATGTTTTTTTGTGAGAACACGATGCCCTCTCCCTTTCCACAGAAC AGAATGAAAATTGATTGATTTGATCGTCTTTCTTTCAAAATCGTTATTAT TTCCATCGAAATATTTTTCACACTGGGTAAGAATGCAATATCTACATGTC AAATGAATTTGATGTTCTTTCTCTTTTTGCCATGGTTACTGAACCTTTCC TCATGTCGGTTGTAATTAATCGCATGTCTCAGATGAAAAAAATTTATATG AAGACGAAACAATTGAACTCTTACAGTTCTATCAGATAGTATCAGATAGT ATTCGAAACTCAGGGGTTTGTGGTCTAGACTATTCTTGATACAGTATGAT TCTTAAATACATGTAGATTTTCGTCAAGCTAGATATAATTGCGATTTCGG TTTGTTTGTTCGATTCATTAGATTCTTTTGACATTTGAGTCGGTCTACTT GTGATAATTTGATATTAGAGACATGTTTTCAGATTCACATACAGTCGAAG CGTACTTGATATTTTTGCTATTGAGGTTAATTCATCGGTTATGATGAGTT TATTAAAATATTCCACTTTATCTTACTATCCTGAATACTTTTTCGCTTGA GTTCTGGATTCTCGTTTGAGCGTTTGTTTATTCTGATTCGCATTGAACGT TTCACAATATTCATTCATCGGTATTTTTTGTATAGATGCAATGTTATAAA TATTATACAACATTAAAAGAAGACTCTCAATAATTTATTGATGTGTATTG TGAGCCCTTAATCAAGTTATATCGAGAAAAAAGATATATTATTTCACGAA TTTCATCTTTGAGACACTGTTCATTAGACTCGAGCTATCATTGAAATGTT GGTTAAATTGTTCATCGCGCAGTGGTATTTGATCAGCAGGATTTCTTGTA TCCTACTCACATACCAAGTGTTCAAAGAGAATGTGTCGGTGAAAGACTTG GTGCCGTTTCACGAAGAAAAAATCTTTTCTCCCTTGAAATGTTATACCGT CTGTCAACGGACGCCGGACAAATGTTGTTTTGTGGAGGTGGACCAAGAAG CAGTGCAACCAGACAACAGTTATTTCTGCCGCTTGTTTGAGTTCACTGGG GATATACATAGCCATTTATCTCCGTCTGTTGGACGTTCTATATCTGCTTC CATCGCTAATCAGCGTGAATGTTTAGATTGGTATAACCAAGGGTTTCGAT CCGATGGAGTGTATTACATCATGTTTCAAGGCCATCGAATGAAGGTTTAT TGCGACATGACCACGTCGCCTGGCGGTTGGACGTTGCTCCAACACCGGTA TGACGGATCCGTCAGTTTCAAGCGCAACGATACTACTTATAAAGATGGAT TCGGTTCTCCATACACGGAATATTGGTTGGGCACTCGATTTCTTTACCGT TTCTTGAGTGATGTTCAGACGGTCACTGTGCGTCTTGAAGCCACCGCAGC GAACGGTGATCAAAATTATATTGTGTACGATGGCTTAAAAATTGGAAACG AATCTGAAAATTACATCATCAAATCTACGGGTGCATTCGTTGAAGGCTTC TATCGAACGGACTGGGACGTACGCAACAACGCACAATTTACTATCCATCT CGATGCAAATGGTGACTTATCGACAGGCTGGTGGTATAATTTGTCACCAT TCCCCATGAATTTGAACGGTTTTTATACTTCAATTGACGGTACATCCTCT GCTATGGACGCCTTTCGATGGCACTCATGGAAAAATACTGAACTTTTGAA AGGCTCCAAGATCATGCTGAGACGAAAAACGTAATTTGAAAAGATGGACA TTTTGGTCTCTAATTAAAGACTACGTGTTTTATCTCTATTTCTTTTCGGC TTTATTGGAATGGCCGTTCAGGCCTCCGAAGGAATTCAGGAAAATTTCGA TCAATTTAAGTTGGATTCTCCGGAAGTTTTTCCATCGATTTCGTTTGTAT TTTCATTAGCAAAACAAATTATAATTCGATGGGTAAATATTTAATCCAAG GACCCGCTTCAATCATTGCTTTAAAAATTTTATTTTCAATTTTAAAATCT TCTCTGCTGGTAGTCTTATGTTTACTGTATTTTTTTCTGTAATAATTTTT AATTTTATTGTTAACTCGTATATCGTATATCGCATAATATTTAAACTTGA ACTTGAAGGACCAATCGATTTACTAACCCTGTTCGTTCTGTGCTGGTTTC TTCGATGAGATCAAACTATAACTCAAGTCTTTATACAAATTGTATGGCTT AAGAAATGTCGGTTTCAATCCCTTTAAAGACGCTTTGTAGTGTTTTGATA AGAACGTGTGTTATGAGCCTGGAAACCACTTCTCCATACAGCCTCGCGTA TAACGTAGACGTAAAACGTAGAAATTTCCGTAATATCGTATTCAATATCG GTAATGTCTGTTTACTGATAAGAAATCACGAAAAGCTAAGAAAAGCAAAA TTAAGCGTCCAAGTCAAAGACATTATCCCAAAGGACCATTGTTCATAGTA TTTACTCATTCCTGAAGAAATAATGATATGTACGCCAGTGAAATTTCTGG GTGGATTTTGCTGCTTTCTCTCAAAGAAAAAAAGAAAAATGAAAAAAAAT AATTGCTTCCATAAAGGTATACAGACAAGCTTGCTGAAGTTTAATTCTCG ACCAATCTGGGGAGTCTTGAACTTTTTCATCTAAGAGATGCGGCGAAAAA AATTCATCGATAAAGAATTCACTGAGTTTGAAGGATCAATAAAGCAAGAT CTCATGAAATGCCTTTATATGCCATTAATCAACAGTTAATTTCTTTCAAT GATTCCTTTTTTAAGGATTTTCGACTTAAATATTCGACTACTACTTGAAT TTATTTTTTTGTAGCGATGGACATGTGTGTGGCCTTGATGGAGGATAAAG AGACGTGTACACTATACACTGATGCAAGATATGCCTACGGTTTGTTCGGA AGGTAGGATGCATGTTGTTTTACTACAAAGAGGATGACCATTTAAACGTT TAGATCTTGAGCCAATTGTACTCACACCGTGAATGTTGAAGTAACGACGT CTAAAATAATACCGAAGTTATTAATATATTAATAGGTGCATTGTTGATTG GATTGTTTAAAAGTAAGTTCACCTCTTCCCAGCCAACACGAGACTTTATA CATTTTTGATTTTTTCAGGTTGGACTACAAGCCAGCCATACCGAAGAACG CCAGTATAACATATGAGATCGAAATTCTTTCAATCGAACGAGGTGTCCCT CTCCAAGAGCTTTCGCCACAAGAATGCAGCCTTAGAGCGTAAGTACTGAT TGATACCGTTTTGAAGTTAGGAAGCCTTAAACAGGGGGGGGGTAAATTGA TAGCGAAATCGAAATCGAATTAAATCAATCCAAAAAATCCAAGTAAGAAT CGGAGGGGACTAGCTTTTACGATCTGTGACATCTTTCATGGGGCGTGACC GCGTGTGTTTAGTTCGCAAGTAGAAAGGGTTTTTTTTTAGAGGGGCGTGA ATTAGGAATAGAAAAACGATTGTACTTAGATCGGTTGGAGTATTTCCGCA ATCTCAAAATCAAATCATTCAAAATTTATGAAGCCTGTAAAATTAATATT ATGAAATAAGTTAAGGCCGGTCTCCACTTGCGCGCGCTTCAATCCTTTTT GCTTGGAAAAAATATTACGTCATAAAATTGTAGCGCGCGCTCGAAAAAAA ACAAATTTGGTTCCTCCCGGACCTAGATGGCGCCAGTTTTTTTTAAACCG GTTTTCCTTTTCTTTTCACAGCGATAAGAAACGAGGGCGTGGCAATGATT TATATTCTCGTGGTGATTACGCAGGTGCCATTGATGTTTATAAACGTGCA TTGAAGTATCTGGAAGGACGTACTGATAAGGTAAGGAGAAATATTTTAAT GAGCAACCCATTGTTGATGTTGCTAAGTTGACTTTTTTTTGCTAGCGGGT GTCCCAGAAAAAAGTCCCCCCTCCTTGAAGTGAATTTTCTATGAACTTTT AAAGAATCAATTCTTTCGCATTTGGAAAAGGAAGGATGAACTTAGATTTT GAGTGGTCATTTGTCAAATTTGGTCATCTAGATGAAAAGCTATGCCTAAA TGCTAAAACATTACTTTTCAAAATAGTTAAAAAAGGCGAAAACGAGTATA TTAAATCATAAAGAAAGCACTTCTTTTATTAATTATATTAGCGATCACAT AGTTCGGGCCCCCCCCCCCCTTTCTTAAGGGGGGGGAAGACACCTTCCGA AAGAATGAAGAATGGGGATCAGAAATTTTCATCAAATAGGGGGAATAGCA TATAAGGGGGGGGATAGTTTAAGAAGATGGGTTTACATCTATATTGTAAT ATATTTTCAAGCACTGTTATAAAATTTGGTCTTCATGAAAGGAAGTTTTC TGTTAAAGTAGTCGGAGTCAAAATTAAAAAAGAAGTTTATTTATTTCGCT TTCTCTGTCTAGAGATATTTCACATATATTTGTTAGCTATTTTTGTTCAA AATCCTGGGGGATAGGTTAAGTTAGGTTCAGTTCAAGTTTAGGGGGGATG CCAAGAAGGGGGGTCATTTAAGAAGGGGGGGTCAAACCCCTTTCCGCACT ATGGATAAAAAACTCTTTGTTCTCTTCGTGGCCAGTTTCCAAGATAGGTG GTCAACTATCGAGGGGATGTTAAGTGGCCCAAAAGATCGCCGGATCTCAC AGTGTTTGATTTCTTTTTGTGGGGTTGTTCATGAAACAAGAAATCTGGGA GCAACTCAAAAATTTGCAATCCCAGACCCTTGATCAATTGAAAGCTTCAA TCAGAAATATTGCAGCTCATCTCGACCCTCAAATAATCCAAAACGCTTTT TCAAAAATGGTTAATCGTGTAAATAAGTGCTTCCGAGGAAAGTAGAAATA CATTTCCTGATGAATAAACAACGTGTCTTTGTCTTACAATAAATTTAATC TCGCCTTTTTTCGACTTTTTTGAAAAGTAATGTTTTAGCATTTCGACCAC AACTTTTGATCTAGTTGACCATAATTTAAGTTTATCCTTCCTTTTTCCAT ATCACAAGGACTGATTCTTTAAAGTTCAAAGAACTCGAGAAAATTCTCTT TAAAAAAAGTGTCTTTTTTCTGGGACACCCGGTACTTTTTTAAGCATTAA CTTGGAAAGAAAGAGTCTGACATCTATTTAACGAGATCGCTGGGTCGGGT ATGAAATAAACGGTCATTAAAAGGGCAGTTCAAACACAAAATCTTATACT TTGTACTAGCTGTGTTCACAATCACAATCGTAACCATTTTCATTTCATTC GCAGGAGCTGCTAGACATGAAAGTGAAGTGTTTGAATAACCTGTCAGCTG CCCAACTCAAGGTTCGTCGACACTCCACAAATTGACACATATTCAAAACG TTCGCCACCTGCTACTGCTAATGTTTATTAAACTGCCGGTTTGAAAATCT TCTAGAATTCGATGATTCTTGGAGCCTTATGGCCAGGAACACTACTGATT AAAAACAAAGTTATTTTAGCCTAGTGAGCAGAATAAATAGACATTTCTTT TGACAATACTTGCGAGATTTGAAGGAGGGTTTGCTTAGAAATTTAAATCA AAAAAGATTAGCAATCGTTTAAAAGGTATCCGATGGTAGCTTTCAAATAA GTTTGTCTAATGATAGCAGTCTCTTCTCGTCTTGTTTAGGTGAAAGCGTA CATCATGGCCTTACAATCATTGGATATTGTTCTTGAATTGGAACCTAAAA ACGTCAAAGCTTTATTTCGTAAAGGAAAGGTAAGCTTTCTCAATGATCAT CTTTGGTGTTCGAATCATCATTCTCTATCTAACTTGAAAGAGTTAAGTTG TGCTTCAGGGCTCAGTCTAGATAATGTTATTTATTTTCCTTTCAGTGTTT GGAGCATTTGGGCAAAGAAAACGCAGCCTTTGAATGCATGAAAAAAGCTG CCGCATTGGATCCTGAAAATAAGGTATTATTTGGAATGCTCCATTTTACA AAACTAATTAATCAGTAATTACCAAAACTTACCAAAAAAACTGATCAGTA GTCGATCAGTATGTTATGTTAGGGTTAAACACTTGTATTTAATGATATTT CAGTTGATCACGCAAGACCTTGGTCGATTACAGAAACGAGTCGCAGTGAC ACAACAGAAGGAGAAACAGATATATCAACGAATGTTCCAACAAAACACAA AACAACAAACTGAAACTGAAGAAGGCGGAGATGAAGGCGGAGAAGGCATG GAAGAAGAAGAAGAAGAGGTGAGATTTGAATTCTCTGGCTTTTGTGAATT TTTGTCTTTTAATGGTCTAAAATATAGCTTACATATTAGTCGGCCCTAAG CTTTTTTAATGTGAATAACTTCTATAAAAATAACACGGCGAGATTTCGGG TTTAAGCTGGCTAAAAGCTATAGAGCAATACTGATAAAGTTTGAATTATA TATGCCAAGTCACATTATCATTAAATTACTTTTAGAAAATTTAGTCATAA ACAATGCCAATTCGCTCATCATCTTTTCGTTTAGGACTACTTTCCACTGA TTGGTTCACTGTTAGTGGCGGCTGCCGCATGTGTTGGTGGTCTCTTGTGG TATCGCTATCGATGATCCGTTACCATTGAGAGTATTTGTTAGTACCGTCG AGCCGTGAAGAGATGGAAAGGTCTATTGAAAGGAGGAGCCTGAACCGTTA CTGATTGTTTTGTTTTTTGTGCTTGAGATTTGCTTTCGAGATGCTTGCCA TAGACTGACACAACACGAACATTTGATGTAAAAATGAAAAGTCTTAAAAT TGATTTTAAAATACTTCACTACGTGTTATAGTGATTTTTTTCAATCTCGT TCCCAGAGCCACTTACAATCTTTTTTATTTTACTGATGGCGTTATGCAAT CGTGAGAAAAATGCGAACTGGGGAACTGGGTGCGAGTTTTGAATTTTCCC AACAATTTCGAAGCTCTGTTATGTAAAAGATGTCATGTAATCTTTTGGTC ATTATATGAGTATTACATTTCAAGGTAATTACCTAAGGTACTTACAGTAG TATATGTGATTATGATCCGCTTTTGTTCAGCAGTTTTTCGTAATCCTTTT GATATGGATTTTCATTCGGTATACGCTTTTATTTACCTGGATTATTTCAA TCATCGAATCATTTTTTTTTTCTCCGACGACTTCTTCTTAGATTTCATTT ATTTTTCAAGTGTCTCTGTTTATGTACATTTTTATAGAATACCTTAGTTA TAGTTATAGATATTATCAAAGTAAAATATTTTTTCTAAAAAGTTTGTACC TTTTCCTCGATAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00068166TCONS_00068166Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00068166-proteinTCONS_00068166-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_48supercontigscaffold_48:234918..243980 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
24.91 21.55 9.62 6.36 20.97 16.54 19.85 21.46 15.83 18.21 14.02 11.01 11.92 11.1 13.92 14.75 34.92 24.35 8.62 12.04 17.26 15.85 33.68 32.19 28.13 26.88 11.87 8.7 21.8 21.92