XLOC_042549 (gene) - C. hemisphaerica

Overview
NameXLOC_042549
Unique NameXLOC_042549
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_48:316356..326416-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042549 ID=XLOC_042549|Name=XLOC_042549|organism=Clytia hemisphaerica|type=gene|length=10061bp|location=Sequence derived from alignment at scaffold_48:316356..326416- (Clytia hemisphaerica)
GATGCATTAGCCTGGGAATCCAAGCGTTAAACTTTTTTCACAGTCTAGTT
TATGATATTTTTGCTGCTGGTGTAACGCTTGGTNCATGAGTAAGTCGAGT
GTAGTATTTCTCGATGATGACTCTGGCAGCCTTCTTGACGGTCTTGGTAC
GGACTCGACCCTACAAGATCAACAAATAATTGAAAATTCTTCGGTTGAAA
TAAAATTTCTCAAGAAATATCGACATTAGCAAGTATTCCAAATACTATCG
AAAGAGATTACTCATCGGCAACGATAAGCTTAAAGTGATTGCTAAGATAT
TAGTCGCTTAAAATTCGTCTAACCAGTAAAAATTACTTCAAATTTCACCC
ACCATTTTGGCAGCTTGATGTGAAAGAATCGAATGAAGTCGAAAGTGAAA
TTATACGGTAGACGATTATAAAAAACACTCTAACAAGGCAATCGATCACT
ACTTCTCATTTAAGTAATCTATTTCCGCGCGGACATGGATATAAATATGA
CAATCTTTTTTTTTTGTCAATCCCCAATACTTTCGACTTTTAAGCTCTAT
TAAGCAAAATTGACATTTTTTCATCTGAAAAGTCAGGTCTTCAAGAGTTC
TACCTGGAAGTCCTGGCAGAAACCCCAGGTTAATTATAAAGCCGCTTACC
GTTCCTAAAAATTCCAATATTACCAGATATGACCTAAAATGATCGGTAAC
TTGTCTAAGAAGGAAATAGTGAGTACTGATTGGCTGACCTATTCCGAGCG
GTTTATTTTGGAATGTTGCAAAAATATTGAGGTCAGAATTGACAAAATCG
AAGAGGAAAAAGACAACAAATAATGATGGCCAAGAAAATCAGTGTACACA
GTTCTGTATTTTTATCCCCACCCAACTCAGAAGAATTCTTACCTTCAGGG
AAGGTTGCTAGTAGGATAAAAGAAGATGACAAAGCAATACCATTCGATTT
AGATGATGGTTTTTCTACTACACACCATTTTCCCAAGTTGGATATTTTAG
TTGAGTGCAGCAAGCATAATTTGGTCAATGTTGTCATTTCTAAAATTTTT
AATGAATTATCAGAAATAGAGTTACTTAGGTAAGTCAATGATTTAAATAT
AGCCTAGTTCTTGATGCAGTTGTGATTTTTTTAATTTGTGATATTTCTCT
TTTTTATTTTCTATACTTTTTCTATTTTCTACAATATGTCTTCTGCCAGG
CGTAGTTAATCGATATAATCGATAATCTTGAGTAATCGATAAATAATCGA
TAAGTAATCGATGGATTAGATAGCGATTAACCGATAGAATCGATAGGTAA
TCGATACCGTGAGTGATCCGACAGCCCTGACTCTAAATCCGATGGGGTCT
TTCAAAGATACAAACTAAAATAAAAACAAACTTTTTGCTGTGACGCAATG
AAGATACCAAAGTGTCGACTAAACTGAGAGATTTGATTCACTGAACCAAT
TGAACCAAAACATTAATTGCTTCTTATACAAAACATAATTCTTTATTACA
AAATTGTTAACGTTTAAACACAAGCAACGGATTCAGAATAATATAATAGA
GGTAATTATTTTAACAACTCGCACTTTTTTTATCACATTAATGGACATCT
TGACATTTTAGTCATCTTGTTAGATGTTTTGTTTCAAGTGTTCTTGCAAT
ATAGTTTATTGTTCAACTTAGAGAGGGAATGTTTGTAAACAAAGAATTTT
TTTTCATAGCAGTTATTTGGGGGTCGAATTTAGGCAAGGCTGTCGGATTT
AGGACCACTCACGGTACTCAAGATTTTTTCAAAGCTCGATTATTTTTCGA
TCAATTTTGTCATCGATTGTTTATCGATTATAGGTCGATTATACTTTGAT
TAAATTAAGTATTGATTAAAAATCGATCGGCTATCGATCACATCTTTTGA
TCGATTACATATCGATCAACTATCGATTTGTGATCGATTATTTATCAGAT
TTTAGGGAGTGGTACTTTAATTGGACTAACTTTCGCCTTCGCGAGATTAA
ATTTCTCGATTTCTCAAATTTTCGCCATTTTCGCCATTTTCGCAAAATTA
AAAGCAACATTTTTCGCTGATCTCGATAGGGATGTACTTTTGAATTGAAT
CCAATCCCCTGGTAGCATAGGGCCTAGAAAAGCTACTAGTACTACACTCA
TTTTTTTTATAAGCATACGGTAAATTTCGGCTGAAGCATTCTCAAACCCT
CTGAAAGGCTGAACAAAACAAAGTTAAAAAAAACAACAAAGTTACCGTTT
TATTTAGAGAAGGGGCGTTATTGAATGGTTTGCCTTTTTGGAGGAGCATT
ATTAATTCGAAAGCAGGCGTTTATTCAAAGTAATACGATCGGTATGAGAT
TTGGCGAATTCCAGAAATTTTCTTTACATCATTAAACATTTGACCCTTTT
TACGCCGGACCTTATTAGCGTTATTTTTGGGCTCGTTGGTGGAATAAGGG
CCGGCGTAAAAAAGGCAGGTAATGTAGTCAATAGTCGGTCACGATCGATA
TATAGTCGATAACGATACGTGATTGAAGATAAGTAAATAATTGATAAGTA
ATCGATGCATGAACGATAAGTAATCGATGATTGTTAACAATCGATACATG
ATTGATAAGTAATCGATAGGTTGTATGTAGTCGATATGTGATCGATAAGT
AATCGATAGCTTGGAAATAATCGATCGCTGATCAATACCCAAGATTTTTT
AAAGGTCTAATTACCTATCGATTCTATCGGTTAATCGATATCTAATCCAC
CGATTACTTATCGATTATTTATCGATTACTCAAGATTATCGATTATATCG
ATTAACTACGCCTGGCTTCTGTTCTGTAACATAACATCCACAGCCTCCCA
TCCAACGTACACCACACCAGTCAGTTCGAAAAATATCTCAAAACAGCTAC
TACATATCCAGACAGTGTCAATCGAACAACTTCAAACAAAAATCACAATC
GAACAAACTTCCAACAAAAATCACAATCGAACCAATCATATCGAACGAGA
TCGAATAATTGCGATTCGATTGTCAAATGCAATCGAATCTCAATCGAACA
ACCGATTCTTGGGTAATATTCAATTGTGTTTGATGATTGCGTTCAAATAA
CGTTCGATTGGTTCGATTGATTGTAAATTACCTTCAATTGATATTCGATT
ATGTTTGATTATGATTACCGTAAGTTGGTCTAATATCGACATCCCTCGTC
TAATTCTGACACCCTTCTTTAGAGACAGGAAACGACCCTTGGCATGGCCC
GAGAATTCTCGGGCCAAAACTTTTATTGGAATTCGCGTAAAGCCCGAGCT
GGCCCGAGAATTCGGGCCGTGTTCGGGCAACGCACGGGCAACGCACGGGC
CACACTCTGGCCAATTTTTGAAAACATGATTTAAACAGGCGTGTAATTTC
AGGACTGAATTTTTTTAACATTTTCTTTGAGAAAAACTTGGTTTCTCTTA
ATTATATTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGATATAAAC
AAAACAGACAAATCTTATTTTGTACTATTTTGTTTGACTGGACATGCTGA
ATCAATTTAACATTTAACATGGCCCGAATGACTCGGGTCAAGTTCGGGCC
AAAAGAATTGATAGGGTCTCTCGGCCCGAACATGGCCCGAAGAGGCCCGA
GAATTCTCGGGCCATGTCAAGGGTCGGGACAGGAATAATATGAAAGCTCG
AATCACTGATTGAAAAAGGATTATTCCTCTCTGACCACCAAGCAAAGAAA
AACAGTTTCAACCTTTCTATCAATTTCAGCTGATAAAAAGGGTGTCGGTA
TTAGAGGAGGGATGTCAACATTAGACCAAGTTACAGTATGTTCGATAAGT
TTGATTGTGATTAAATTAAATTTGATCACTTCTTTAGAGCTTTTTTAGCG
TGGACGGCCGAGCGCGTAAGTACAGTTAATTCCCACATCTCAGATTAGAT
TAAAGTATGAGGCCCTAGGAGGTTGAGGAAAACAAAATACTGTAGGCAGA
CGAAGTAGACAAAGGTACGAGAGGTTTTTGAAAGTGTTTGAAATGCATTG
ATCTAAGTACCAAAGGATATGGGCAAACGAGGAAGTTAAAGAAACGTGGT
GATTCTGCGGTGATGGAAACAGTATATTTCAAAATGTAAAAGGAATGCTG
AAATTGTATAAATTGAACTTGGGATAACATTGGGGATGCATCAAGATATA
TAACTGAGTGCCTAACCCGTTTTGATGACGGGTGTCCTACCTAGTAGCCT
GTTTTGATGACGGGTGTCCTACCTAGCCCGTTTTGATGACGGGTGTTTCC
TAACCTGTTTTGATAACATGTGTTTTCTAACCCGTTTTGTTGACGCGTGT
TTTCTAACCCGTTTTGATGACGGGTGTCGAGCCTAGCCCCGTTTTGTTGA
CAGAGGTTGAACGATAACCAGGGATGCATGGTCGGTAGTAAAATCTCAGA
CATAATGATGTTTACTACCTGTTACTACGGTGGTGGTGTGGCGAGAAACC
AAAAAAAAAATTTTACTACCTACGAAAGCATCCACCGAAGGAGGACTTCA
AAATATCTGTTCTGAAGGCACGTTCCAGCTGGATATGACAGTCTGTTCTT
ACCGAACTAAAGAAAAAAGTCTGCTGGAAAAAAGTGGTCTGTTCTACTGA
AGATTGGGACCAGCTGGAAAAATATGGTCTGTTCTACTAAAGATTNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NTTAATTCTAAGGGCAAAACATTAATTTTTGCACTAAGTGAAAAATGTGT
CACAGAAATAATCATTTTTTAGCTTTTTTTGTAAAATCAGTCTGAAAAGC
AACCAAAAAATAGGTGGTCTCCATGATAAATTGTCCCAAAAACTTTTACT
ACCAGGGTAGTAAGATACCTCTTCCAAGAGTCCGGGTGGTGGTATGTAAA
AATTCGTAAAAATCCTTTTACTACTCATATATGGCTGAGATTTTACTACC
GACCCCATGACCGCGGTTGCCTTGGCGAACCTTAACACTGTTTTGACTAC
AGTGTTCTGAACCTAATCCAGATCTAACTGGATCCTTGACCTAGGGAATG
AATCTAAGTAACTGACTACTGACTTGCCAAGTTTACATAGTAACCCAACA
CTAAAACTAAACGTATCATGATGCATCCCAAATGACCTAATCTCTGGTTA
ACACAGCCTTGCCCAGGGTAAACCATGAGATCAGGATCCATCGCATCGCA
GCAGCAGTCAACATGCTCTGATGAGAACGCAGTTGATAACTAAAAGAGAA
AAGGAAGAAGCAGAAAGCAGAACCAAAACTACAGAGGGCAAGCAGGAGAG
GTTGGGAGGGAAAGATTAAAGTCGCAATCAATACAGGCTTAGCTTGAAGA
ACAACCGGCAGTCGAAATACACTATTTCTTAACCGCCTTGGCACAGTGGC
GGGATGAACTTCATTCGACTTGGAATTAACCTAAGCTAAGGTTTAGCTCC
AATACAAGATTGAATAAAATGGAATACAATTGAATCAATTGAATGTACGT
AATCGAACATACACGCAAAAAAAATTTTCTTAGTATTTTGTTAGTATTTT
CACATCAAAAACGTTGTGTTTCAAGCAAAATCAGTCTTTTTCTTGCTTTA
TATTCCCACTTCTGAAAATACCTAGTTTAGTGAATCGCGAAATTTAATAC
ACGCGAAAATTTTCCAGAAGTCGGCAATCGCGAAATTTAATACACGCGAA
CACGTTTTTTCGAAAAAATTTCGCGATTCAAAAATTTGTAACACGCGAAG
ATATATACCAATAAGGTAATCGTTACAATCGAACGGCAAATCCTGGGTAA
TATTCAATTGCATTCAACAATCAAATCGCAATTTTATTGTGTTCGATTGC
TTTCAATTGATTCGGAGATCGATTCATTTGATTGACACCGTCTGGACATA
TGGACAAAAAAGCTTTGTAAGAAAAAAAATAGGAAAAGTGGGATTTCAGC
TTCAATCTCTTGATCATGATTTCTTTTTGGGAAAAAATTTTCAGGGTGGT
ATATGCTATATTATTATAGAAAGAACAGAGCTAAGACAAAATGGTGGAGA
GAAATACAGGAAAAGTGTATAATTAAAACTTCAATCCCCGCGAAAGTTTA
TCCCATTAAAGTATACGCCTGTTCCTTATAAAGAAAAATACTTACAGTTA
CAAAGAATAAACCCACTCTTCTTCTGCACTGCCCCTAGTTTAATCTTCAG
TAGACTCTCGCTAATTTGAATTTCAAGGGGGAAGACATTTTTTCGAATTA
CAGAGAGAATTTTGACCCAGGCAAAAATTTTCACCCACGCAAAAAATAAT
GACCCACGCAAAAAATATGACCCACGCAAAAAATAATGACCCACTCAAAA
ATATTGACCCACGCACGCACACAACCCACGCAATTTAGCAGACTCCCTTA
AATAGACCTTTTCTTAAAATGCTATAACAATGCCCTATTATTGACTTTTG
TTTGTTTATGTTTATAATGAAAACCGTTAATTGTTTTCAATCATTATTTT
GAAGGTACAACTTATATTTTTGGCAGGGTATCTCACGTGAATCAAGAATG
GAGAAGAATAGTTCGAACATCATGCATGAAATCTGGGAGAAGGTTATCTC
GGTTTATCAAAAAATCTAAAGCAAACTTCATTGGCGACAAGGTAAGTTTT
ACTTCCAAGCACTGTTCAGTTCTGAAAATGTTCTTTTTAAATGCCTTTTT
TCTGATCAAGTCCTACTCTCGGGTACTCCGTAAGCACCTCCCCGCTAATT
AATTTTTCGAAAATTTTCCACCCAGGACATACATAGAATTTTTCCACTCA
CCCTGCTTTATTCCAAACTCCCCGTTTATTGGATACTCAAAAGTACCCAA
GGTTACTTACTTAAAATGAATTTAATTAGTATACAGGTTGAGCACAGAGA
AAAAGTTTCACACTATAAATTTTACTAGCCGTATGCGCAGCGTCGCACGC
TGCGTGTCCCAATCCAGTGAATCACTGCACATCTAAAATATTCTAACGGA
AGAAAGATAGCCGCCGATTGATGATTTGATTTTGATTTTAGGAAATAAAG
GAGAAAAATTAAAAGATAACATTGCATTGCTATTTTTAACCACAATTAAA
TAAATGGCTTAGCAAAAGTATATTTTAGATCTTCTTAGCCATCGTGGCTA
GCCATCGTGGTTGGACATTCGAGGGTGACTTTGAAAGACTTTTAGTTTAA
GACTTAAAGTTTTGAAAGTGTTAGGGAGCCGCTATTGTAAACAGAAAGTT
TTAAAGAGCATCTGAATAGGAATTCTTTAAAATGACAAAAAAAATTTGGG
AAGAAGGTTGATTTTCACGCATCAAGCTCCAAACTTGGTGAATAGAAAAT
AATATCTTGGGTCTCAAAGTTAGTCTAGTGGTAGAAAATCTGGCTGCTTA
AGGTGCAAAAAGATGATGGTTCAACGCCATGAAGAGAAGGCTTTGTAGGG
CTTTGTTAGATTTTCGAAAACTTTTTACAAAACTTTGTAAACACACACGT
TTAAGCGTATTAATATATAGATTAGAGAGACAATTTCAAAGTGAAAGTTT
GAAAGAAACTCTTGCTATACCCTTGAATGAAGTAATTAATTTTACGCAAG
CCACAGTTGGCTTACTGGTTCAAAAGAATGCACATTCTTCAAAAAGACCA
GAGTTCAAAGCGGGACAAAGTATAATATAAAGATACTTTGAAAAGTTTTG
AAAGTGTTAGGGAGCCGCTATTGTAAACAGAAAGTTTTAAAGAGCATCTG
AATAGGAATTCTTTAAAATGACAAAAAAAAATTGGGAAGAAGGTCGATTT
TCACGCATCAAGCTCCAAACTTGGTGAATAGAAAATAATATCTTGGGTCT
CAAAGTTAGTCTAGTGGTAGAAAATCTGCTTAAGGTGCAAAAAGATGATG
GTTCAACGCCATGAAGAGAAGGCTTTGTAGGTCTTTGTTAGATTTTCGAA
AACTTTTTACAAAACGTTGTAAACACACACGTTTAAGCGTATTAATATAT
AGATTTCATCAAGTTCTAACACCCCACCTAAAAACTATCGATAAGAATCT
AACCAATCAATACACTTCTTTGTGCCGGTGCTGCCACACTCCCTTTGTAA
CAAAGTTTGGTTTACGCATGAATCTAGCCTTATTGCACTTTAGGAAGTGG
TGATTAATAACAACTCGACTTTCATTTAGGAAAACAGCGTTTTGGGAAAG
AAACACCTTGCTCCACCTGCTGTCTTGCTTACACCCCTGTCAACACCAAA
TCCTTTGACTCAACGTAACGATAAAGTTCAAGATGCAACACCGATCAACA
GTACTTCTTCAAATGTGACTGTCCAACCAAGCTCTTCAACTTATAAACAA
TGCCCTGATTGTCAATCACCAGCACGAACTACATTCAAACAAGTGGGCCA
CTGTACAAACTGTGATAAAGACTTTTGTATACGTTGCTTATTTACCAATA
ACAAACATTCGCCAACCTGTCAAATGGTGGGTGGCACTGGCGTGTCGGGA
AATATGACCAGAAAATTGGATCAAAAACCTTCTAAACGTTATTCTATAGG
ATCCTCGGGTAATAAAGCCAGACTGAAACGTCTGTGAATAATAGTTAGAA
TGTTAGAATGGACGCCGATTAATGACAGGCAGATAGTTCAGAAGACGAAG
TTGGACACTTCACAACATGGTTGATCGAATAAAGACTACACATACAGAGT
AGTTTTCGAAGAACAATGATGCAAGATGACAAGAATGTACCAGAATGACG
TCACATTTTAAACAGCTTGCCACGCATGGAAGATCACTACCTTCTTATAT
TGTTATTTTAGTGTATACGAATCTTGTGCGGTATCGGGGGTCTCTCAATA
CTGTAAAATGCAGAACCTTTTAAAAGGGAAAAAAGTTTATCGGCTTTGAT
CAAACCAACTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00068171TCONS_00068171Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00068171-proteinTCONS_00068171-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_48supercontigscaffold_48:316356..326416 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.39	8.03	5.38	3.75	28.08	22.11	8.69	8.54	4.15	6.36	4.12	2.71	1.21	1.35	2.76	3.72	5.35	4.5	0.62	0.45	1.75	1.57	3.36	3.41	147.75	79.86	1.3	0.31	1.2	1.2