XLOC_042632 (gene) - C. hemisphaerica

Overview
NameXLOC_042632
Unique NameXLOC_042632
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_482:463190..471146-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042632 ID=XLOC_042632|Name=XLOC_042632|organism=Clytia hemisphaerica|type=gene|length=7957bp|location=Sequence derived from alignment at scaffold_482:463190..471146- (Clytia hemisphaerica)
CACGCACATTATGTTGACCTTATCGTTATGGAGATATCTATAAAGATCCA AGCAACATGCAATGCGAGATATAGATAAAAGTCAACAAGGAAAATTTTTT GAGAGGAACAAAAATAAAATTTTCATCAAATTAATGCGCAAAGAACGGGA GAAGGAGATACGAGGTTGAAATTGAAAAGTGAGAAAGAACTACACACGTG AAGATAGTAAGTCATTTTACTTCTACAAATTGTGAAGTCGTTGCATGCAT AAACTGTCTCCGATAAGAAATGGAAGAAATTGAAGAAAAGTATGCAAGAA AATGTCACGGTTTTTCAAATCTGATCCTTAAAATCATTAATACTCTGTAC CAGAGTGTGTCTCACGTATAACGTAGTATAGTACACATCTTTACGGAAGT AAATTCGTAGATACCGGGTCTGTTTGCAGGTAATAAAGTCATGAGTGGGA ATAGTAANTACCCAGGGTAATTAAATACTAAAATGGGTGGTATCTATGTG TTAAATGTTGAAAAAATTTTACTACCTGGGTAGTTAAAACTGGTAAAATG AGCAAATTTTAGCTATATTTTGTAATTCTTTTAATTTTCTGGATGACTTT TCTGAAAAAATCTGAACATTTTTATAATATGAAAAAATTTGCAAACAAAA AATTCTCGAAATTTTTTGTCAATATAAAAAGACTAATTCTAAGGGAAAAA CATTAATTTTTGCACTACGTGAAAAATGTGTCACAGAAATAATCATTTTT TAGCTTTTTTTTCAAAATCAGTCCGAAAAGCAACCAAAAAATAGGTGGTC TCCATGACAAATTGTCCCAAAAGCTTTTACTACCAGGGTAGTAAAATACC TCTTCCAAGAGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA GTCTGGGTGGTGGTATGTAAAAATTCGTAAAAATCCTTTTACTACTCATA TATGTCTGAGATTTTACTACCGACCCCCCCTGGCAAATTAGGACGTATAA TAAAAATTGGAAAATTTACCTTTTCTTTATAATATAATGTAAAGAGGCGA TAATAATATCATCAAATGATGCCAATGATGCCACGCACATTATGTTGACT TTATCGTTATAGAGATATCTAGAAAGATCCAAGCAACATGCAATGCGAGA AGTAGATAAAGGTCAACAAGGAAAACTTTTTGAGAAGAACAAAAATAAAA TTTCATCAAATTGATGCAAAGATCGTAAGAAAGAGATACGAGGTTGAAAT TGAAAAGTGAGAAAGAACTACACACGTGAAGATAGTAAGTCATTTTACTT CTAGAAATTGTGAAGACGTTGCATGCATAAACTGTCTCCGATAAGAAATG GAAGAAATTGAAGAAAAGTATGAAAATGTCACGGTTTTTCAAATCTGATC CTTAAAATCATTAATACTCTGTACCAGAGTGTGTCTCACGTATAACGTAG TATAGTACACATCTTTACGGAAGTAAATTCGTAGATACCGGGTCTGTTTG CAGGTAATAAAGTCATGAGTGGGAATAGTAAATTCATCCATACTCTAAGG TCCCGAATAGACGTCCCCCCCGCTTATTAATTTTCGAAAATTTTTCGGAC CCCCCCGTTCTTATTAGGACCCCCCCGTTTATTAATTTTCTAGTTTTTTT GTTTTTGAGTTGAAGTGTAAATCAGGCTTAACGTTCGAATTTTGGTAAAA GGTAAAAGGAAACTTCTAAATATTTTCAGACCCCCCGTTTATTCAGACCC CCTCGTTTATTATATTTTGCAAAAATTTCGGACCCCCCCTTTTATTCAGA CCCCCCTACTATTCGGGACCTTAGAGTAGATGATGGATGAGTTTCGGATA ATTTAGACAGCTATAACAATATCGACGTGAAACGACGTCTTTTCACAAAT AAATAAATGAATGGTTCTGTTGACAAAGGCATCTTGAAATAGGACAGAAG CGATGACGTCATCTTTTGATTCAACAGCAGCCAAAAGAAGGTTAATGATG TGGTTAACACATCGTTGTTTATACCTACTTTAGAAATGGAAATCAATGGG TATACTATATGCGCGGGTAATTGTTTCATGATTGCGCTATAGGTTATTAT TTGGTAAAATGGTTCTTTGACGAGACAAATCTTCACGGGGATTAAATTTC ATAGAAAAGCTTATCCATGGAAATTTCTCGCGGTGACTCATTTGCGCAGA TGAGTAAATAAAACTCCTTAATGCAGGGGTCCCACTCTAAAAATCCCTAT TATAGTATGATTTTATGCCAAAAAATGACCAAATTGTATGATTTTTTATG CCAAAATTAGTCAGATTTTATGCCAAATTGTATGNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACTT TGAGTCAACAAAAAATGTGTCTGACTTAAAAATGTTTGAAAAAACTCTCT TGGGAAGGAAAATAGAGAGGCTGAAGTTTGTTTTGGAGGAAAACCATTTT AGATTCATCTATTTTTGAAGTTACCAGAGCGATTTCATTTTTGACCTCCG TTCTAGGGGACATCCACTGTAAGGTTTTATCTTCAAATTCTGTAATTGAT TTTTCACTATGGTCAGAGCCCTTAAAAAGGATTGCCTCGCTGGCTACTTT CAATTATTGATAATAAATGCACAAATTCTCATTACACTTTATGCTTGGCC TTCAAGCCTCTAGGCTACTTGTTAGTCTAAATTAACCTTAAAAATCTTCT TTTTGCGACACAGAAACGAAATGTACTTTGCAGGAAGAAACCTTTCTGAA ATTCTATGACTATGAAATAATCAGTCTGGAACCTTTTTGCTGCCAAAATT CTTAAAACCTTTTGCAAAAACCCATATAGAAAAACTAATAAATATTTTGA GCAAAAATAAAGCTCATCACCAAATAAATTTTACAATAAAAATCTATCCT AGATAAAAGATTAGACCTAGAACTAAGTTCAGTGAATTGGTTTTATGTCG ATCTACAAAGTTTCTTGCCTTAGGAAAAATTCCTGGCTTTTTGGTCAAAT TTTATGCTCAGTATGCCAAGACCTTATATTTTATGCTATTTTATGCCAAT TTTGATAAAAAGATTAAATTGTATGATATTGTATGATTGTATGCCGAGTG TGACCCCTGTAATGGCAAATAATTTCACGAAGCATTTTTCTATCCGTTGA AAAGAGCAAGTAGGGATCTTCAAATATTTCGCAGATGAAATCTTTTCAAA ATTTCATCTGGACTTACTTTGCGGACAAAATTCATCCCATCAAAGAACAA GCAAAAATCCTCACATGCTAGAGAGCCTTCGAGACAGGAAAAGTGAAGAC CTATGTACAAAGACGCTAAATTCAAGAACTTAAGAAAGTCGATGTGAAAA ATGGCACACGAAAAAGTGAAACTCGATAGATGAAGATAGAAGATAGGGCT GAAAACGAGAATAGGCTCTTAACAGACATGCTGTCTGAGATTCTAGTACT GACCTCCGACCTCCCCCTGAAGGAGTAGGATCTTAATCCAGACGAAAAAT GTATTGATAAGACATTATAAGTGCAAGCTCAATGGAATGTTAAAAAGACG TCGAAACGAAGGCGTTAAGAAAGCGTACAATTGATATTGATAAATTTTTC GTTAAGGAAATGATCATTTAGTGGCAGAAATCTTGTGGTTTTCTGGGTCA GAATTTTATAAAAGATATGAAGGAAATTAGATCTAGTGGATTAGCTTCAG AGAAAAATAACAGAGAAAATATTTCTTACGAATTATGAAAAAGAATCGAG ATAAAAAATGACTTACGTAAGAATTGATAAGAGAAAGAGGTTGGATCTTG GGAAATAAATGTTATTTTGTATAATATGTTGTGATGACAAGAAAGTATAA ATTTGAAAATTTTTTGCTTCGAGTTCATCCATACACGGATACACCGTTGT ATACAAGCAACGAAGCTTGTGTTTCCATATAAGAAGAATTCTGTTTGTCA TTTTGGAGCATAATATGTAAGTTTTGCGTCCACTGAAGAGACAGTGAAAT CACTGTGTTTCTGAACTTTTTAAAAAGAGATTTAGTGGAATAAAGAGAAT CAATCTCAAAGTGCTCTTAAGAGAATCCTAGAAAAAATCCGAGCAAAATA TCTAAAGAAAGAGAAAGAGATTTATAATGCTAAAACCAACCATTTGAAAG AAATGTAGTGAAACTTACATGAAGGATTTTGGTCTTAGTTTATCCCATTT ATTTTTTAAGCGAGAGACAAATTACTTGACATATGTGATACAATGTTTTC CTTTCACAAACATATGAATAATGACTAATGGCTCCTATAGACGATATCGG CTTCACATGAAAACTCAGATTTGACCCCCGCCGAGAATTCCTGACAATGC TTTGTGCGGAAAAAAATTTCACCGTGAACTTTTTGCGTAAAGCATTGTGG GCAATTTGCGGAGGTCAAATATGAGTTTTCACGTTAAGCCGATATCGTCT ATTGGGTCTTGAAACAATCATGGTTCTATTGTTTCAAAACAAGAGAATTT AAATCGTATGTGGAGCCTAAGGCACATGTCATTAAGAAAAACATGTAGCA ACATGTCATTAAGAAAAACATAGCATCTTACAATTCAATATTTGTAAGAA TATTCTTTCTCTATTTTCAGGTATTCGATAGCAGAAGAAAACGAAAGTGA CGAAAGCATGTCGGATGGAGTTTGTATTCACACTTTACTATCCACCAGAC GTGGTGAACGAAGCTATTCGATTCGTGTNTTCACACTTTACTATCCACCA GACGTGGTGAACGAAGCTACTCGATTCGTGTTCGACGCGCCCAAGAAACA CATCGATTGTTTCTCGATACGAAACGATCCGTTCGCAATGTTCGAGTATT TTATTCGTTCGAATTCGTGCGTGTCCGATGTCATACCAAAACTTCTTCAG CTATTTATCTTCCTGGAGATTACGATGAGTTAATACTGCTAAATCGTATC AATAACAAAAGGTTTTCGCTTAAAGATGAAATTAGAGACCGATCAGCAGT CTGGCTTGCAGTTATGAAGAAATTTCAGCACGAGAAACGTGATTTTGATG TCGGTGATATTCTGAAAGTCACAAAACCCTGGCTTGGTCGACGTGTATTG AATTGGTTCAAAAAGACTTCTGACCGACGTATTAAATATTTGGATACGTG TGTTTATCCACGTAAGAAATGCTTACGTATCCCCGTAAGTGACTTACAGA AATACTGTAAAGAGTGCGAATGTCCGACGAAGAAGAATTACAAAGCTTTG TCCGAAGCCATCGAGAGAGAGACGCTACCTTTCCTGATGACCGTACCCTT TGATCCTTTTTCCAGATCTGTAAGGCGCGCTTCAAAGTACGCAGAATCAA AGGATGAAAGCGATACAACTTATTTTGAGAAAGTTATCATTGACGGTGTG GAACGTTTTAATGTCTTTTTGACATCTATGAGTGATGAAGAAGATCGCAT CTCAGCTATAGTGATTCCACATGAGTTAGAGTTTCACGCTGAGTGTAACA TGATAAGTGGTGTTATAAATGACGGATGTGATTTAGAACTCAGTGAAATT GAACTGTTACAGATCCAACAACGACTAGAACCTCTGTTAATGAGAATGGA TACTGTTGATGACCTGACTCAGATTGATCTCGAGGCGCAGAACAGGGAAT ATTCAAGACGGGAAAGTCATGTTGAACATGAAGTCGAAATGGAGTGTTTA GTCAAATACAAAGCATCTTTCAAAAGTACTTATACCTCATCCCCAATTCT TCAGCCTGTCGCTAAAAACAATCCATATTATAATGTCGTTGTAGGTGAAT CAGGCCATCCAGGACCTGCTGATCAAAGGTTTGGTCTAGAGAAAGAAGGG TGGGAGAGTGAAGAAGAAGNTCATCCGGAACCTGCTGATCGAAGGTTTGG TCTAGAGAAAGAAGGATGGGAGAGTGAAGAAGAAGGGGAAGATATGCTTA GCTTCGATGAGAAAGGAGGCTTCCTGATCACCAAGGGTCGAACAAAGAAC AATAATGATTATTTAACTCCATTAAATGAATTTGCCAAAGATTATACGCG ATTCAAGAGCACCATCCAGAAGATACAGGATGAGGAGATGGAACATCCTG AAACAATGGTTGTTGGTGTGAAAGGATATGTTCAAGTCAATGGTGATGAA GATGGGAAGAAACAGCTGGTGAGATCTGAAACCAACCCCAAAAAGAAGAA ATTGTTCAACTTTTTCCACAGGAAGAAGCAAGGAGAAACATCAACTTCAA GTCCAGTTCTGGCAACAAATAGCAAACGTGGTAAACAAGAATCAGCAAGA CTTGATTACTATCAACCTATGTTTGATATTCACCAAGAAAAACCTCCGTT ACCTCCGAAACCTGCCTCACTGTCAATGTCCTCAACATTGAGTTCGCTTG CAAAGTCACCAGCTTCAACAGTTTCTCTGGGAGAAGGCCCATCAACATCT AAAGCGCAATCACCAAGAGACAAAGGCCGTCTAGTACGTCAATGGACAGC CTGCAAAGACGACGAAGAGCAGGTGGATAATCAGACATCTAGTTTACTTG CGAGCTTTAGCAACAATGAACTACCAGATAGATACCACTTTATGTCGGAT GATAGTGTGAACAGTTCACCCATTCCGACTGCACGAAACACTTCCAAGTT TGCGCATGCTCAAAAGAGAGCTCTGGTCCATCACCAGAGAACCATTATGA CCGATAAACGTTCGTCCACGGCTCCTTTATTGGGTTCTTTCGACGAATTA ACTCCCGAAGAGAGTCCAGTCAGATTACGAAATGAAACTAGAACACTTAA TCCCAATAAAAACAACATACCAACCAGTCCAAATAACTCGGAGAAGACTG AGAAAAAGAAGCCGGACGTTCCAAGAAAACCGAAGTGGAGCAACAATAAT CGTTCATCAATGAGACCTTTATTAGACTCTTTTGATAATGGAGATGGTAG TGACTTTCCACAAAGTCCAAAATCTAATGACAGTTTCGAGAACAGTATTA GTCAGGCTAGACGTAGCTATGGCAACAGATCTTCAACACATAGCGCTATN TTAGTCAGGCTAGACGAAGCTATGGCAACAGATCTTCAACACATAGCGCT ATATTGGACTCAAGGATACATTATTTTGAATCAAAGTTCTTTCAGTAGAA ATCTGGTGATCAATCTTGATTTTCTTAGACTTTTTTTTAGACCATTTCTT GTATATATTCCAGATATGATTAACTTAGAATTTCAAGACTTTTCTTCAAC TTTTAACAATTGATTTTTTTTCGTATAAATAAACAACTGTTGCTTTGAAT TCATAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00068316TCONS_00068316Clytia hemisphaericatranscript
TCONS_00068315TCONS_00068315Clytia hemisphaericatranscript
TCONS_00068314TCONS_00068314Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00068314-proteinTCONS_00068314-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_482supercontigscaffold_482:463190..471146 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.06 0.05 0.05 1.07 0.62 0.42 0.42 0.75 0.57 0.74 0.49 0.5 0.64 0.31 0.33 5.34 12 0.36 0.28 1.44 1.34 1.38 1.49 3.34 3.06 0.4 0.25 0.09 0.05