XLOC_042634 (gene) - C. hemisphaerica

Overview
NameXLOC_042634
Unique NameXLOC_042634
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_482:517634..521986-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042634 ID=XLOC_042634|Name=XLOC_042634|organism=Clytia hemisphaerica|type=gene|length=4353bp|location=Sequence derived from alignment at scaffold_482:517634..521986- (Clytia hemisphaerica)
AAAGGACACTCTTACAGCTTCTTGAATAAAATTTTATCCATTTGTGATCT
CAGTCTTCACCTAACTTTCACCAGTACAAACAAGCAAGACATGGGTGGTC
AAGACTTTATTGTTATCCTTTTATGTGGATTTTGTCTCAGTTTTTTTGGT
AAGTTANTTTAGTTCTGCTTTTAATTTTATCGAAAGTTCAGGAAAAACTG
AGAAAGATTGCCACCGCAATCAAAAGTGGTAAAACAGTACTGGCTCATGA
ACGTGGCGTAATTAAGTCAAGTTAAAGGAAGAATTTTGGACGGACAAGTT
AAGTGTCCACCTAAATTCGTTTCTTCCGCTATCCACCAAATTAAATACCT
ACCAAATTTAATTAATTTCATATACTTTCCGCTATCCACCAAATTAAATA
CCTACCAAATTTAATTAACTTCATATACTTTCCTCGGATTTGTACTATTT
CCGGCTTTAAAATAGTATTTTTGCATATTCAATAATAATCTTTGACAGAA
AAGTAATACTATTTTTTCAGGCTTCCTGCAGATTAAATTGCCGCTAAATC
TTTTTTTCCTTTTTAATAATAAACTCACCTCTACATCACATTCGTTCTTA
GGTGACAAAAACAATGGCTTTCGATCTCTATACAAATGCTTGTATTGCCG
TTTGAAATTCTCACAACATTCAAGCATGTTTTTCTCTTTATCTGTGTTCG
TCTGGTAAGACGGTGGAAACTTTTTCACTTCAGTTGATGATTTCCTACAA
TAAGAAAAGAAAGAAAGCAAGTCTGTTAATTCTTGGTTTGAACATGTTAG
ACAATTGGGTCCATTAGGCAAATGCAAGAACGCAGAGGGATAGGATTCAT
TTGAAATTCATTTGAATACTTTTTTAATGAATGGTTAACAACATGTTAAA
ATGGGTTGTTTCAAAAACTTTCCTAATCGTGAAGAAATCTCATATTGTGC
TGTGGGAGGAAATGCCTGAAAATCTCTTACTTAATTTTCAGCATCAAATT
ACTATTGGCATTTGGAGACACTCAAGAAGTCTAGTAGCTCATTAGCATTC
CATTCTATTTCACATTACTAAAAGCTATTGTAGAGGAAATTTGACACTGG
ATTTACAAAAAAAAAAAAACTAAAAAAGTACATTGCACGATATCATATTG
CCAAAATAAAAGGACACTCTTACAGCTTCTTGAATAAAATTTTATCCATT
TGTGATCTCAGTCTTCACCTAACTTTCACCAGTACAAACAAGCAAGACAT
GGGTGGTCAAGACTTTATTGTTATCCTTTTATGTGGATTTTGTCTCAGTT
TTTTTGGTAAGTTACCTAACTATCATAACATTAAGAGACTACTTCAATGG
GATAAATTAAATTCAAAAATTAAGTCCCCGCGAAATTTTATCCTATTAAA
GTACAAGGGTTGATTTTATCATAGTGTCCTCCCCCCCCTTTATAAAGGGG
GGGGGGAAACCAATTTTCCAATTTTGAATGACTGAGGGGGGACAGTGAAA
ATTTGAATAGTAAAGGGGGGAAAAAAAAGAGGGGGGAAAACATCGGTAGT
TGGCAAATTTGGTGGGGGGAAGTGTGAAATCACTTCAATTTTATCTCAGC
AACCAAGGTCAGTCCACATGATATCATGTGATTAGATCATGATTGNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NAGATTTAAAAAAATCAAGAATTTGGTGGGGGGAACAAACCCTGGAGGAC
ACTATGTTTTATGCAAACCCTGGCCCTAAAACTATTTCTTTGAACACAAA
ATGTATATAATAATCCTGATGGAAAAAAAATAGAAATAAGAGGCTATTTT
TTCTGAGGAAATCATCGTCAAGGAAAACACTTATTTCTGCGCATCGACTT
CAGTTTGATAACGAACTACAAAACTGAAGACTATAGTGAGATGCAAAAGC
GCCAAAGTACAGATATACAAGTTGGCACATCATTTGAAGTCGCCAGAGTT
TATTTAATATACTAATTCATTAATTTTTGTAAGGGAACAAAAAGCGCAAA
CTTAAATAATCAAATTATCAAAATCATTTTGTTTACTTCTATTTCACGTA
TCAGAAATGGACTGTGGACGAATCCTTCCATCAAAGGATCAAAAAGAGAC
ATGGAAAGGAGGAGATTGTACCGTGAAATGGACACTAAAGCCGTCAGCGA
ATGAAAAAGCAGATTGGATCACTGTTTATCACCAAGCTGATGAAAACGAA
TACATCAAACCAATCTGGGAAGACGTCACCGGAAAAACTACATATGGACG
CCAAAAGTTTATGAAGAACCAAACCTTATCTGTGAATGTACAGAAAAATG
AAATTGAAATCGTCATTGGAAACATACAAGAGTCGATGATTTTATATCTG
ACAGCAGTGTTTCTAAATAAGGATGGGGAAATGAAAGATGGTCCGTTGCA
ATCGAAAGTCACCATCACTATCTCGAGTGAGTTTCTTCTATCTTTCCTTT
TGAAAGACGTACCTATACTGAATGAAATTCTAAATAAATACATCTTTCAA
ATGATGCCGAAATTATAAGATGTGATACAAAGTTTTGGGACTTCCATTTG
GGACAATCGACGTAATAAATTCACTTTTAGGAACTGTTGCTTCTTCAGTG
AAAATACTACTTTAGGCGTACAAACTTTCCTGAGCAGAAACTTTCACGCT
TTTCGCGAGTTTTTACCTTTTTCGCGATGGTTCATGTCTTTAAACTTTCG
CGAATAGATCTTTTCATAAATTACGTTGCACGAACATCACTTGCCTCGTA
TTCAAACAATTAGCATGGTGATCATGTCTCTTGAGACATAAATGATTTTT
TTATGAATAGGAAGTAGTTTTAATAAAATCCGCTGGGAGTTAATCACCAT
GGCAATAATTTCTAAACGAGGCAAGTGATGTTCGTAACGTAATTTATGGA
AAGATCTATTCGCGAAAGTTTATGCTCGCGTAAAACTCTTGTAAAAAAAG
ATCTAAAAAACTTTTAACTGAGAAGAAAATGTAAAGATTGGAGCACCTTT
TTAGCCTCGTAACTGTAAGTCAAAAGATAAAGCATTTGTACTTCTAAGCC
ATTTTTTTCTAATGGAAATTTTCATTTTAATACCTTGATTCGCGAATAGT
TATGCCTGCGAAAACGATTCTTCCATTAAATTTGCGAAAGTAAAAGTCGT
GAATTTCGAGATTTTTTTACCTCGCTAAAACTTCTGCTCGTGAAAGATTG
TACGCCTAAAGTAGTCGGAATCTATCTTACCAGTAAATTAACTTTCGAGA
CTGTAAGCCCTTACCTCATTGAATAAAATAAAGTTTTTATTTTTTCTAAG
GTGGAATGAAAATCAAAAATGGCACTCTGATTAAAACATTCGACAAATTT
TATCCACGATACGAAGTTTCATTTGAAATTAAGCCTTATGGTTTGACACC
TTGGTCTGATACCAGCATATTGGATTTGACAACTGGTGTGTATGATCCGA
GTGTTCTAAATGTGCGGTTTATATCCAACTCAACAACTCTATATATTTGC
TCACGTGGTAGTTGGTGTTACATTGGGAAAGAAGATCTAACGACAGAGAA
ATACACTCACATCGACATCAAACAATCGAAAACACAAAATCAAACATATT
TCGTTACAATCGCGACAGATGGAACAGAGGTTTATAGGAAAGTGAACATT
CACCCTGAAAACTTCACAAATGTTAAAGTTTATCAATCAAGTCCGATGTA
CACCCCAGCTAAAGCCTTCATCAGAAATCTCAAAATTATAACTAAACCAT
GACATTTAATAAGCGCTACTCAGGAACTTCATCATATTATTTAATACTAA
ATCGACGGAAAACGAGCTAATTTCTTTTTTATTCATGCTATAAAACCAAA
GGCTTAAAAAAGAGTGATGGTCTTTTTTACAATACTTTCATAATATTTTA
ACTGAAAATGTATACAAAGTTTCCCCAAGAAAAGCGGACAAACTTTTATA
TCAAGTAAAATCCTCATAATTGATGCCAAATTTTATGACTTGCATACTTA
ATATTTCAATCTCAAAAACCTATTCTATTATCATCTTGGGAATTGAATAT
ATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00068319TCONS_00068319Clytia hemisphaericatranscript
TCONS_00068318TCONS_00068318Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00068319-proteinTCONS_00068319-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_482supercontigscaffold_482:517634..521986 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.2	0.1	0.08	0.31	0	0.07	0	0	0	0	0.35	0.26	6.08	4.87	14.1	10.06	4.93	6.66	0.59	0.31	13.74	14.43	4.44	4.59	7.01	4.22	0.48	0.63	2.17	2.57