XLOC_042663 (gene) - C. hemisphaerica

Overview
NameXLOC_042663
Unique NameXLOC_042663
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_483:462747..468516+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042663 ID=XLOC_042663|Name=XLOC_042663|organism=Clytia hemisphaerica|type=gene|length=5770bp|location=Sequence derived from alignment at scaffold_483:462747..468516+ (Clytia hemisphaerica)
ATTAAGTTTAAAAGGATAATTTGAATTGAATAGTAACTGAAAGCTGATTG GAGGATGACACTTTCTCCACCTTGGGCCGAGTTTctaattatatttttat ttgggGAAAGACTTGTATGTCTATTATATATAGCAAGACATTGACAATGA TGCATTTTGGTCTTTGCTTTTCAGAGACTTTCGGAGTGTCTGGTCAATTT ACAATCAAAAAGCCATTTGTCAATGATGCGCCGTTATCACAAAAAGACCT TGATGATAAAACGTCTGACACTTACAAGTTCATGgttcaaactttgaaaa acaagGTATGTATAAAATACATACTTCAAAAATGCACAGGAGTTTCAGGA ATGTCTGATTTGATAAAGCCACCCACCTCCACCGCCAAATACTTATCATT TTCTGTTCAATAAAAACCGATTGATAGTCTGATACAGGCTATATTCGATA AGTTGATTTCCAACGTCCTACTAGTATCAGGTTACAAAACACTCTTCGAT TCGTCATTTTTCTAGGGTAATAATACAATAATTAGCGACACGTTAAATTT TTGAGCCATGCCTTAAATAagatttggagattttaaagaaaatactgTTA TGTGTTCTTCTATTGGATGTTCTGACATTCTTTTGTAGCAAAGATATTCG GAACTGCGTTTCCTTTGCAGTAAGACTTGAACAACCTAAATAGTCTAAGC CTCAGCCATTACTTacttgttctcataaaaaaacgctCATGATAGTTTGT TATTGAATAATTTATTGATTGATATGTTTCTCTTAGATCATGACGTcctt gaaaaacgaagaaaagaagATTTCAAGAATCGAGATTACAAAACTGACGT AAGTCGAGTTAATTTCCACCTTACAGTCCCCTGCTAGGGTCTGCGACCTG TCGGACTAAGTGGAGCCCCTTCCAATTCGCAACGATTTACTAAAAATAAT CTCTAGAAGCATCACTACTACCCTACTTGCTTTTGTGAGCTGGAAACggg aaattgataaattttcgaCTTATGGAAAATTTGATGTGTATAGACTTGat ggaaatatctttcaaatttctttcttcCTACAGTATTGGAAGCCTTGTGG TGGATTACGAAATTTACGGTACCGATACATTGAATAATGAAACTTTGAAT GAAGGAATTAAGAAATCATTTTCTGACGATTCGAATCTTCAAACATCAAC TGATACTCACTCTTTCTCTGGTACTATCGATCCTCAAAGCCAACAGTTAA ACGGTAAGGTtagatagatatgccctccgatgcatcggaatgggtcctac cNGATTAACGTCAgttgaaattgaaagaaaattcagactgcaaaataaat aattgattttggtctgtaaaataccaacaaCTAGCTGAGTTAAACCGTTA TCATTATTATCTATCTTTggtaaaaatttcaagttcatagcACTTTCCAA TCATAAGAGCAGGGTGATTAATCCGTAATATAATAAGGTTTTTTCAtcga aaacaagtgatacttttatggacatACCTGattatcaaaactaatcaatg aacatttaaacaatgaaaaacTTAAGAcataaaatggtcaaaatccaaaa taataatatttgTTTGGGTAAGAAGTGCTTACAAAGACACATATATAATT AATGCCTacgttttataaaaaacatgtttaaaaaaatttcatgatcaAAC ATAAGTATTCTTTCAAATTCAAGACGTTGTGagtaaaaaaacatctatct catcaaaaaattgagtaatttggctacaAACATTCATATTTGCTCATTAA taatgattcttatagataaagttttttgcgttttttgagccgttaattat ttttttgcaaaatcaattTGAATCATCTTTTatctatgatggtaccctac tagatagatatgccctccgatgcatcggaatgggtcctacccacggtgga gtaggaatcacagcgcaatcagacattgcaaccctgcagatgcgagctgc cgagccatggtgtataccacgacactcgaactacacgggagaacggatgt cctcgcaggtgtagaacctcctgAGTGTCAcggcacaccacaatgtctga aacatctacccatactcttgtatcagagttatggtacccaattcccctca catggcatgggttgacccgggcgaaggagcattcacttgccaagtgaatc gtagtgccacggtgggtatcgaactcgagcctcctggacagaagtcaagc acgataaccactacaccactacgtacggtaccctactttcatccaaaaat tagaaaaaaattatgatccAATATTAATCACAAAAACCAAAAACTCTTTT CTAGCCAAAAATCggttccgtcacattcgagggtttatagttatgcatct ttgtgcaagaaatcataaaaaatgaatgagtcaatctcgagaaaagctaa taactaaataattgataatgtgcttataaaaaatattgtatttgggaaat ttttctataaaaaacacGTCTAGCAAGCAAAGTTTCATGTCCAAAcacaa atattctttaaaagtaagcctcgatgagcaaaaaaaacatctatcacaaa aattgagtaatttggctaagaacagtgatgtatgcttattaataatgatt cttatagataaaaatgcgttttttaagccaacaaattttttttgNTcgat gagcaaaaaaaaacatctatcacaaaaattgagttatttgactaagaaca gtgatgtatgcttattaataatgattcttatagatagcgttttttaagcc aacaaatttttttttgaaaagatctgctttagccatcttttacctatgat agtaccctacattcatgcaaaaaattagaaaaaatgaataatcCAACTTT TCACAAAGTGCGAAAATTCcaatttttagccttttttagGCCCACATTTG CCCCAAAATTTACTTATTCGAAAATCAGCTCCGCCattttcgagggttta tagttatgcagtattgtgcaaaaaatcataagaaATAAAAGAACCAATCA CGACAAAAGTTAAAAACTAAGTAATTGgtgatgtgcttataaaaaaatat cgaatttggcccatttttatctaaaaacaaccaaaattctATGACAAAAC ACAATTTTTCTTCAATAGTGAGCCTTCATAACAACAAAAAAATCtacctc ataaaaaaattgagtattttggctaagaacatcgatgtatgctatagtga ttcttatagataaacatgcgtttttgagccaacaaaattttttttggaat tatctgcttgagccatcttttacctatgattgTACCCGAccttcatgcaa aaaattaaaaacaattaatgatccaatttttcacaaagtccaaaaaaccc aatTTTTAGCCCAATTTGCGAAATCCGTGTgcaaaaatttatatcaaatc cagtgaaattttttaaaacctGGTCTCCATTAAATGGAGGTTCCTACACC ACAGTTCACGGTTTCAGGGTCTTACCCTGAAAGAAATGCAAATTAAAAAG CGCGGGAAACTGtttttttaacaagcgaaaaataggatttttaacaagcg aaaaataggatttttaacaagcgaaaaatacgattttttaacaagcgaaa agtgaaatttttaacaagcgaaaaataggatttttaacaagcgaaaaatg agattttttaacaagcgaaaaatacgatttttaacaagcgaaaaatatga cttttaacaagcgaaaaatacaatttttaacaagcgaaaaatatgacttt taacaagcgaaaaatatgacttttaacaagcgaaaaatatgacttttaac aagcgaaaatgGCCATTCTGTTTTAATCGcaataaataattttgaaacaa acGGCACGTCAtaaatttcNcacagggtccatttttcgagaAATCACCCA GTACAATCTCTACAGACGATAAGGGTGGTTGTACCGCCTCCAAGCACCAC CATAACCCAACCACAGGGGttttcaattttccatttttcatttttgttct tTAGATTTTACTAAAAGACTGCATCTCTACAAccaaattttgttaatatt ttcagCCATTGATAATTGCGCGTCTGAGCCTTGTCATACAAATGCTACAT GTACAAACAACGTTGAAAAGAATACTTTCTCTTGTGAGTGTGACCAAGGA TTTGAAGGTGATGGTTTCACGTGCTCAAGAATCATTGAACGAGTTGTACA CAACGTTAAATTGAAAGATGACTGTAAGTATGATTAGTGAAATTCTACTC TCCTCTTGAAACCAGTGTACAAagtttttccgtctcagacggattttcgt ctcaGTGAGGTGCAAAAAGAGACTTTTCCGtctccaaattcaacaaaatt ctgcaaaacatGAAGATACGGAATTAGTGCCATTCAGATTCTcctttaat tttttaacgacgaaactaaaaaattgacaacgaaaataaaaaattgacta tgATGTGAAGTCCGAAGACATTGCAATAGTGGTGCATTTCATGAATAACA TTaattgaacgttaaaacaacgttgaaacaacgttgtttgccaGCTAAGT GAGTACACTGAGTTACGGATCAACTTTGAAATAATTATTACCTTCAAACC TTTCATATTTTCAGGGTCAGACGATTCGATCATCATCGTAGCAGTGTTGT TCTCCGTTTGTTTTGTTGTGATTGTTATCTTGGCTTTCTGTCTTTGTTGT TCCAAGTAAGTGCATTATGCCAactttctttgtgtttttcGATAGTAAAT TGCTTTTGTGTCGCccaaaggttgaagattcattGCTAAATTACTTAACG AATGTCTAAATTTCTGAAAGTTTTCGAATTTTGGAGTAcctaattttcaa ttttttgaaagtttttttcaaagtaTTGATTGCTTATTATACctctgtca aaaaatttttctcgaaaTCCTTTTAAAATTGTTCGATTATTTTCTCTTTG TAAGATAAACGccttttttacaaaacttttttattttattttctagacGA AGTCAAAGCAAATCACAAAAGAAGAACGAATTTTCGAATTACTATTCAAC TGACGTTCCCACAAAAGAAAAAGTGCCGGAAACCGAACTCATGAACAATG TTTACATCAATGATGATGTCAATGGGAATAATTCTACGGTAACCGATCCT AACAAtccaaaatatcaaaacattcgCCAAAACATGGTATAATGTGGGAA GATTTAAGATTTCACTGATTAGATTGAACAACGCTAGtccaatagatctt atcggagttttttatttttctaaaaaaacgatgcattgtgggattgtttc gggagtaacagaattccctcgaggaattcctaataTATTTCTATTggaat actcccgaaacaaccCCACAATGCAttcctttttagaaaaatcaaaaact ccgataaggtctattgcgaTTTTACTACGTTTTATAtgaatgtgataaaa aaaataaaataaataaatatgaaaaattataaCCTACAAGTGGACTAGCA GACTTATACCGATAACAGGATCCATCGAGGCGCCCCATGAATAATTGTAG aataaatttgtaaatattatgaataaatttgatatctttttgttgaaata ttttaaaatggatttttattttgaatttttttatttattattttcgaaaa aagtttttttttagatattattttttttatactaAAGAATTTAGCCTGTA AATATAAAAGACGAAAGTGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00068351TCONS_00068351Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00068351-proteinTCONS_00068351-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_483supercontigscaffold_483:462747..468516 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.79 0.68 0.44 0.37 8.9 6.41 3.51 4.7 1.97 2.4 1.94 0.56 12.62 15.27 1.66 1.64 0.45 0.71 1.43 2.02 1.84 1.16 1.36 0.92 1.22 1.79 2.76 1.57 0.81 1.53