XLOC_042805 (gene) - C. hemisphaerica

Overview
NameXLOC_042805
Unique NameXLOC_042805
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_486:165329..173005-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042805 ID=XLOC_042805|Name=XLOC_042805|organism=Clytia hemisphaerica|type=gene|length=7677bp|location=Sequence derived from alignment at scaffold_486:165329..173005- (Clytia hemisphaerica)
GAAGCAAGTAATGTGGATTTTTAATACTCAAATTCAAGTTTTAGCATCTA GTATTACCTAGTATTACCTGAAAAAAAGTTAATAATCGGGTCTGTCCCTT TTTCATTAACAAGAAATGCTTGCACATTTGCATGGCAACTATAAAAATAT CCCCATTAGGATCCACATTATAAGAAGTACAATGAAAACTCAAGAAAGTT TAGTCTAATCAGTCGATAAGACACTTCCTTGTTTGTGCTTATGCTTGAGT TCTTATAAACCTGAGATTTTAATTCTTATAAAAATTTTACATTCCAGAAA AAGTAAAATGTAAAGCAGATAATAAACAATGTGTCTGATAGTGGTTTGAT TATATAATCAATTATAATATATACCAAAATCTCTACACAAGACAACCACG ATGGTAAGTTTAGCTATTTTTTTATTGGTTAAGCTTTAATAAGGAAATCT TTTACTCTTTTATTTTGTTTTACTGTATACCTTATTTCTGAGTTCTACAT GGTTGTATATATTACATGAATATAAGTATCTATGGAAGTATTTAATGCAT TGAAATTAACACAACATCAAATTAACACAAATGAGCAAGTTTTAACTTTA GGATAGACAGGAGATAGGAGAGCTTGTCTTTGTATTTAAATCTGATGTTT ACTTGACTGGTCAGAGCTGTGAGTCCATTTACAGACTAAAAAGCAAAAAA AGCTCATTTTGTCGCTGGACTCACTTATATTTCATTCGGAAGTGAGTGTG ACCACCGGCACAATAAAGTATTTTGATTGGCAGATTCTTATCAACGGTTT TTTGGTGGGAAATTTGAAACTTTCAAATCCTCAGCTCTGGCCATGCTATT CATTTCGCCATCAGTATATAAATAAAGAAATCATAGCATGGATCTCCAGG CTAACTTTAGGAGTGAGCCTTCAAAAATTAACAAGGTTTTTATTAAGACT AAGAGGAAAATTTTCTATTTGTGTTAATTACACATCTCCTAATATTCATG TAATAAGGTACACATCTTTTTGGAGCAACCAGATGGCTAAGGCTTGGGGC CTTGAAATCTGCCAATGATTTCCCTCCCAAACAAGTTCTTGGTAGCAGAG AATTGGCCTCAGATTTTAGACATTTTGTCAGTCCACCATCCAAAGCCGGT TGCAATACTTTAATAAAGAGGTTTTCAGATTGACTGAGTTGCATAAATTC TGCCATTGTGTATGCAAACTTTTGCGTAAGGAACTGCCTCTACAAATTGA AACGTTTTCTTCCATAAAGCTTTTTTCACATGTACGTAAAATTTTACTTT AGACCTTACGGTAAATCGTTCGTAAGGCTGTCTTTTGGGAATTTCCCCGA CATTATGTAGAGTTTTTGTTGATTAAGAGGNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNAAGAGGGTCTTACGTGACTTTTCCTTCCGTTCAAAACTTTTTGA ACGTAAGCAAACTCTACATAAGGTCTTAAAACACTACGTAAGCTTAGGGA AATCCCCCACCCTTCAAGGTCTTAAGTAAAATTTTATGTACATTACATGT GAAAAAGCTTAATAGTGGATTTTCCTTGAGTAACATAACTTTGACAGAAC CTGAAAAGCCTCTAAACTATCTCTGAATTGTCAAATTTTCGTCATCTTTA TTTTTAATTGAGTAACTTTTACACCTGTGACTTTTATCTTTGTAGAACAA ATTAAAGTCATCACAACGTGACAAGGTCCGGCAATTCATTTCTTTCACCA ACACTGGCGAGAAGACGGCAATCTTCTGTTTGAGTTCTCATGATTGGCGA ATGGACATTGCTACGGACAATTATTTTCAACACCCAGAACGTTACTTCAA GGAGAATAGCAAAAGTTCCTCCTCTGATAAAAATCGAATCGACAAGAAAA AAATTTTACACTTGTTTGAAAAATATAAAGGTATACATCATTCAGTCCGT TACAAAGCGATTGCAACTTTTTTATCTTCTTTTTATTAAATAAACCATCT GTTTGGATATTAATTGAATTCAAATAGGAATGGTTTTGACCTTCTTTCAA AGGTTGACCTCAACGGGTAGAACCCCCCCTTGATCAAGTGGGATGGGCTT GGAGCAAAGATCTAGTATAGGGGGAAACTTTTATTTAGCTAGCGAGAGAG TAATTTAGGTTAATAGAGAGCAGGCGCAGAGGGACCTTATGCTAAGGAAT AATACCCAAATCTAATTGAAACTCTTTTAGGCACCTACTCTAATAAGTGC TCCCTAAAAGTTCTTTGCCATTATATTTTTCTCCCAAATCCCAAAAAATG CTTATTTGAATTTTAAATTTTTGCCCGAAAATATTTAATTCTTTACCCTG GTTTTAAGTTTTTACAACCCTTTCCAAAGCCTTTGGATTTCAGATGGAGA GGATTTTGGAGATAGTCATTCTAGCTGCCAGAAAAATGTCTAGTTAGATT ATTCTAACATATACTTTTGATGTTTCAACAAAAGTTTCATATGTCACTAT AAAAATCAATTTTCGTAGTTTTAGAAGGAACTTTTTAAGCTTTATTGTCA GGAAGAGCTGCAATCACTTTGATTATATTTTGACTGAATTCTGGCATCAA GATACTATGGTTTGAGATTATAATAGTCTCATTATCAAACAAAGCACCTT ATCTCTAAAAAGTGTGTCCCATATTTACCCCGTAGTGAAATCTTAATTTT GGGGTAATTATGGGACACTAAAGTTTGAGTTTCAAGTGTTTATTTTTTAT AAGAAAATTACAAACTTGATTTTCTAGTTTAATGGAATCATAACTACACT CTAAGTCTTTCAAAACCTGCAAAGGTTTGCATCTAAATTTACTTCAGTTG GTCTAGATTGCTCTATACAAATATTACTGTTTAAGTGTCCCGTTATTACC CCCAAATGGGAAAAAATCTGGGGTAAAAACGGGACACTGTCACTATTTTT GTTGAAAATCCTTTAAATGATATGTATGTAGCACTTGGATTTGAAGTCAT CAAGTGAATGCAAAACCTCAAATATCATGACCCTTTGGAAAGATATCTGG ATTTTTCAATAACATTTTATACCTGTCCCATATTTACCCAAAGGATGTCC CGTAATTACCCCCAAAATGCGGAGTAATTACGGGACACCTTTAAAGTAAA TTTTAGGAACATCTACTAAATTTCAAGGAAAAGTAATACATCTTATGTAA AGGTCATACTTTGAAAAATAAAATATCAAAAGATCGGATCTCTAGGATTA ATACTTTCAGAGTAATGCCCAAATAAGTCAAAATCGTCCCGTAATTACCC CAGATGACTATACACTTGTTCCTTGGGTAAATCTCATCTGGTGGACAATT TTTAAAAATTTAGATTTTCGGGGTCTGGGGACGAGTTTATGCACCTTAAA TGAAGTTAGAACATATTCTTAGTTGATTATACTTCTAGAACGCTCAGATT TTTTTCATCAAACTTACCTATTAATCTTATAATTTGAGCCTACGAATGAT GCAAAATAATTTGAGCCCACATTCGACAGTACCAATATTTTCTTCTCGTT TTTAACGAGTTTATAAATACTTGATTCTCATGTTATTTAGACCCACATGA AGACAAAATGCTAGCCAACGGTTTATCCAAATTCTGCGAAGACATTGATC TGGATCCAGCAAGTTTTGAAATCTTGTTAATCTGCTGGAAATTCAAAGCA GCTGTTCAGTGTGAATTCACAAGGAAAGAATTTACCGATGGCATGTTAGA ATTAAGGTACATGATTTTTTATAAACATTGCATTCATGATATGGCAAAAA AAAAATAGCATTTGCTCAGCATTACGTGACCCTACATTTTCTGATTTTTG CTGTTTTTGGCTAGATTTTACGGATATTTGGGATTTCCCTAAAATTTTGC TTAGTAGGATGTAAGCATCCTTCAAGTATTTTTCAGCCTTGTCAATCTCT AGGTCCAAGCCACCTCCGAGCCATTTATTGGAACTTTATGTGCTTAATAA AAAGAAACATGCTACAAAAATGAAGAAAAAAAAATTTTTGTAAACATTTT CTAGTTGTATGTAAGGAGTTTGTGTATTTTTATGTTGTTCTAAAAATGCG TTTTTAGATAAGTGCTGAATCTGGCTGAATGTATTACTTTGCTTAAAATT AATATAAGGCGAGGCCACTTTGATTAGTTGTTTTACGGGCTCGACCGACC CTGAAATTCCTAAAATTGAAATAAAAACTTTGGTAGTTTTTCCATGGTTT CGAGAATTCTATGTTCAATTTTTGATTTTATACATGAATTCGAGCTTTTT GTGCCTTTTTATTTTCTATTTCGCATTTTTGTTAAGATGTAGCAGTTTTT GCTGCCTTTTTAGGAGATTTTAAAGGTGAAATTCTACTTTTATTTTTATT TTTTTGCCGACCGACCGACCCTCTTTTTTGGGTAGCTTAACCCATAAAAC AACAAATTAAATTGACCTCGCCTAATCAATTCTTTTCATGTCTTTTTATC TGTCCAGTGTCGATAGCTTGGATGGGTTGAAAAGAAAAATGCCCAGTGTA GAACAAGAGTTAACAGACGCTGCAAAGTTTCGTGATTTATATCAATTCAC TTTCAATTTCGCTAAAAATCCTGAACAAAAAGGATTGGGTGAGAAAATTA TCTTTTCCCAGTATTTCAATGCTTTATTATACCTTTTTTATATCGATGAT TGTATTGCTCTATAGTACTGAGAATCGCTACCAGTAGCAAACATCAAACT GGATAATCAGATGGTCAGATGGTTTGAGATCTTTTGACTTAGATTTCATC CATGATCCTGAGAAAAACCTTTATATCTTTCTACCTGACTCCTTTCCTCC AAAGTCATGAAAAGTTAATTTGACATTTCTAAAAATGGGTTCTTACACGG TTCTTACGTTAGAATATTTTCATCCTAAAAGCCAAAAACTTTTCACTGGA ATATCTTGGCTTTGGAAAAGAGGTTTGGAGGTTTTGCTGGGAATTGTAAG AATCTACAGGCAAAACATCTAAAAAAATCTAATTAGTCCCTTAATTGTAA TTTCATTAACAATCATATACTTTGTTTCAGATCTAGAGNCTAATTAGTCC CTTAATTGTAATTTCATTAACAATCATACTTTGTTTCAGATCTAGAAATG GCGATTGCTTATTGGAATATTGTGTTCAAGGGTCGCTTCAAGTTTCTCGA ATTATGGGTGCAATTTCTTACTGTAAGGATTTTTTTGGTTTTCCGACTAG ATCTACTTGTTATGTTATAGTCAAACATTTATTAAAATCAGATACTCCTC AGAAACGTTTTAGAATACATCAGGCCTACAAACTTTTGCGAGCAGAAACT TTCGCCCTTTTCGCGAAAGTAAACGTCTTTGAAAATTCTTGATAGAACCA TTCGCGAGTATCAAGTAAATTTTTTACGTGACAAAAGTTTATGCTAGCGA AAAGTTCTTACCATAATAGAATAACTGTAAAACTTCTAATTTTAAATAAA TCGTAGGGATTATACAGTAGACTTTCGGTTATTCGAGACTGCCTATTCGA ATAGGCAGTCTCGAATCCCCTTGGATTTGCTTACCAAACTCACGCAAAAA CACTCTTAGCTATCCGAACTTATTCAAACTCTCAGTTACTCGAAGCATTT CTATATATATTCTGTCAAATTTGCGAAAGTCAATCTCGTAAATGTAGCGA TTTTTCGACCTCGTGAAAGTTTGTAGCATCTTCTAACTGTTCCGGAATAT TAAATAGATTCTATACAAGCCAACCCTAGGCGAGGATAACATCTTTTAGC GTCTTCTACACTGTCTGCACCACAAAATGTAGGTTCACCACAAAAATTAG GGTTTTTGGTTTGACGTCCGTTGAAATTTATTCAGTGTGTGTTTGAAACC AGAAAACTTTGGAAATGGAGGACCTATGATGAATATATCAACATATCTAA ATTGTAATCATTGCTTTTTTTGATAGTTTTCTTGCAAAACCAGGGATTTT TTTCCAAAATTAAAAAATAAGTTTGTCCTACAAACTGGAGCCAATTTTTA AAAGCTTTGTCCGTCCTGAACATTGTGTCAACATTTTATGTTGGAAAAAC AAAGAAAAACATATTTTTTGAATTTCTATTGATTCTGTATTGTATTAGGT TTTACCACACAAAATTAACAAGAAGATTTGTTGATTCCGACAGAAGTTAG ACGGAATAAGGCTCGCCTATATCTGTGGGTGGAGCAACTTTAAAACTGAA AGTTCGAACTTGACTGATTTTTATCCATAATGGTTTTTAGAATTGATCAC TATGAAAAAAATTTTTGTGACAAGTAAGTGCCATAAGACTCAATTTTGTA TTTCCAATGATTTCTTAAGGCATCAGAAAAATGCAGAATTTATCGACATA TTGGGGCGCCGGCAGTGTACCCGAAAATAGTTCCCATTTTGTCATAATTG TGGTCTTACTCGACCAATTGTAGCCATGTTGTTATTTTCTCCCCATGCAG GAAAATCAAAAACATTCTATACCAAAAGACACGTGGAATTTATTGTTGGA TTTTTCTAATTCTGCCAACGATGATATGTCGAATTACGATGAAGAAGGTA CTTATAGCTCTTTTTTTCTTTCAATTCCCACTTTCTTTGTCTTAATTTCA TTGGGTAAACTTTTATGGGGATTAAATTTGTCCCTCTTTTGATTTCGGTT TTTTTGTGGGTCATCCCTAAGCTAAAAATTTGAAATTTGACTTAATCTTA TTTCTAAAAGGTCTAATGAGTAGATTTTCAAAGAGATGGACACTCTATTT TCGCATTTTTTTTCAAGATCGTTTCATTTCGAGATTTGAATTCTGCAAAG TTATACATTCCAGTATGTTTAGATTTTTCTCATTTTTTAGACGCATGGCC TGTTTTGATCGATGATTTTGTAACATGGTCCAAACCCAGGATACAGAACA AAAAAACAACGCTGGTTTGAAGCAGGGAAAGTTCAAAGAAATTCAAATAA ATCTACGATCATCAAATTTTGAAGAAGATTCACACTACAGATTTTTCTCC ATTGAAATGAGATGGGTTTGTTGTTGTCGCAGGTACCTTGAGGAATGAAA ACTCTTCTCATAGGTTATCTTCGCACTGCAAACGCCTATAAGAGAATTCT TATATCAAATCCGTCCTTTAAGACCATGTTCACACGTTACGGTTCCGTTT CGCTCTAGTATGATTTTCTTTACTGATCGAGAGTGTTCATATTGGTTTCG GAATGTTTCGGAGCAAGAAAACGAAGCAGTTCCGTTCCGATAAAAAAAGT GGAGCAAAACCTTCTCGATCTGTTTTGCTTTGTTACGTTATCTTTTTTGA CGTTTCGAATTTTGACGTTCACACTAGTTTCGGAATCGTTTCGTTTCGTT TCGTTTAGTTTCGTTTCGGACCGTAACGTCTGAACATGATCTTAATCAGG ATTACGTTTCCATCATCGTTTATGCTACCAAGTAGTCAATGTAAATAGGT CACGTTCGAAATGAGTAAATTGTTTTGGTTATAGTAGTAGGGTAGTATAA AAAATAACTTTTTTAAACAAAATGTATATTGTTAAAAAGAAACAATTTTT ATACGCAATGGAAAGAGCTGTTGACTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00068624TCONS_00068624Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00068624-proteinTCONS_00068624-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_486supercontigscaffold_486:165329..173005 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
DCUN1D2DCN1-like protein 2 Homo Sapiens
DCUN1D1PREDICTED: DCN1-like protein 1 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
94.04 96.48 65.81 53.47 33.75 27.98 49.33 49.87 54.44 45.73 36.34 37.74 27.77 25.49 33.53 33.89 41.71 43.95 17.05 23.1 40.92 36.2 63.13 57.08 54.25 57.85 36.18 26.95 36.09 35.53