XLOC_042909 (gene) - C. hemisphaerica

Overview
NameXLOC_042909
Unique NameXLOC_042909
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_49:28971..34060-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042909 ID=XLOC_042909|Name=XLOC_042909|organism=Clytia hemisphaerica|type=gene|length=5090bp|location=Sequence derived from alignment at scaffold_49:28971..34060- (Clytia hemisphaerica)
TTTTAAAGGAGATGGTTCACAAAAGTGTCAGGCAGCAAAGTTTCAAATTT TTGGACCTAAAGATAGAGATCTTCGAGCTTATCAGTATAAGGCACATTTC GTAAGTAATTAAGCTCTACTAAATTAATTAAAGTTAACGATGCGTGCTCT TATCAGCATCTAAAAAAATTCGTTTGGAGACGAAATGTAATGATGATTCT CTTGAAGATCTCAAATAAGAGACTTCTCACAATTATTCTCAGAAAACATG TTAAATGTCCTCGAAGAAAGATAACTAATTAGCATCATGGCTATAATCCC CCAATTTATATCTGAGACACTTCACATGGCTCCCCTTTCCCCCACTGTCA GCGTTGAGTACTCGGCCATTTCCGGACTCAACACTGATAGTGGGGTCCGG GGCACGGATTTTTATCTTACAAAAATATTTAGAATTCTTCTGTCTCATAT TTGTGGGGGATTGTAGGTCAACATACACCTATTTCAACTCCTTCTAAAAT TGACACATACATGTGGGTTTGTAGAAAAACCACTAAACGAAAGTTATATC ACAAAGTTTTGGCAGCCATCTATGTTGCTAACGGAAATACAAATAATATT TACGAGCAATCAAGACAAACAAGATATTGTTTCAAGTGGAATTCATAAGA GAGCCGAGGGTAATAAGCTAGGATTGTGAAATGTAACAAATTGTTTGGGA GTTAATTGCTCTGTCAATTCAGAGGATAAGAAAGATACAAATAGAATGAA TGTGAATCAGAATTGTAAGCGATTGTCTAGACAGGGTATGTTTTACTGGT CTTGTAACTGTTTCTGCTAGAATTCAAGAAATGATAGCCAAGTTTTATCG AAATAGAGAAAGTTTTGGAATTAGGAAGGTTCGAATGATACCTAGTGAGT AAAAACACTAAACGTAAAATACATGTTTTTTTTTATAAGAACGTCCAAAA TTTTTGAAGCCTTCAGATGTTCTTAACTTTTTGAGTTTTAAGCCTGTTCT TAACATGTTCTTATTTTCACCATTTTTGAGCATTTTTGTCCATTTTCCTT AGAAAACAGGTGTCTTAGCCCACGAAGCTTTAAAATGAACTTGTTCTTAA GAGTTTGGCCACGGAAGCCTTATGTTCTTATATAGTTTGTTCTTATAAAA AAAACGTGTAAACGTGTAAAATCGATTACAATCTCATTTCGCGTGAAAGT TTGTATCAGTTTTTTGATCAGTGACAATTGGAGTCATTGAAATTGAAATC AAATCATGTTTCATTTATACAAATTGATGATTTACGAATTTGATGTTTTG ACGCCCTCGTTTTTTGATATGAGGTGCGAAGTTTAGAATATGATGTTTTG GTAGCCATTTCATATTTTGTGATACCCATAGGTCCTTATGTAATCATTTT CGAAAACTGAGAACCAAAAGAGGACTGAAAGATGAACCAAGTGTGAATCT TACACCTTTATGACGAATTCATTATGAAATTTTTAAAATACCTTTAATAG TTGTTACTTCCTTTGTAAAGTGTTGTAACCAGAGAAAATTTTGGTCCCGA ATCATTTCGAACGTCACGTCATGGAGTGCCCTTTACTCATAACCACAAGT TTTAAGGAGCTGATATTTCCGTCAGAGGTCAGTGGGTCAGTACAAGTCAT ATGTAACCGATACAGCTGTGGCATAAATTATTGATTCTATAACACATTTT TGGTCATTACTGATTCTTCTATAAAAGCAGGGATGTAAGTAACGGGTGTT GTTTGCATATTGTATTCTTTTGAAACAAACTGAAAGATGCCATCAGTACT TCAAATAGTGAAGCGTGCCACGAGGAAAAAATTTCAAGAATTTGAAGTAC TTTTTGAGAGGTAGGTCGAATCTGAAGTGAAGCTTTATTTAGACGAAACT CCAGTAACCAATAACATAGTCAGTTCAAGTTCGTTCCATAAAAGGGTATA AGAACTAATCGAGAGTACTAAAAGATCTGTACAGGAGAAAGAAATGCATA TCTTGCATTGCAACACTTTTTTGCGGTTCAGTTAATTCCATAGTACTTTC ATTTCGCCAATCGTTCGGTCTTTTTATTGTGTTCAAAATAAAATAGTGGA TCATTCTGCAACAATTTCACTCTCGAAATAAGAAGAGATTAATTTCCAGA TGGAGGCCAAGTAGTGTGGAATAGTGTTTGGTAATTCTGGTGAAACGAGA TGGAATTAAGGAGTGGTTTGATGGAAGTTTGTTCATTAAATGATAATTAA TTAAAATGGTATTGGATGATCAGCTTTTACTAGTAAATAGCTGCTTTTAC TTATTTCAGTTATATAAGATTTGTTGTTGGATAAGTATTGATAGGCTATC CCAGCTAGTAATCAACGTCAAAACAACGCCCATTTGACATTCATAACGTC CAAATAACGTTAGATGTACGTTAAAACAACGTTGTCTGCTTGCTGGGATA TGGAGTAGTTTTAGTACCTTTCAAAATCAATTTTCGATTTCTTAAGATTT CAGTGAAAATAGCATTCAACGATAATTGTTTTAAATGAGAAGGCTCGTGT TTAATATAGATAAGGAAACTTTCACGAACTTCTGATAAGAGATTTGTACT GTAAAATATACTCATATAAATACAGTAATCATCAGTGACGTCTGTTTGGT GATCGCTAAGCTCCTTTGCACTGAGTGCGTGGTCCGATGTGTGGAAAAGG AAACTCGTTGGAAAATATTTTTATTCTGATCGTCAGTTTTGTATAAGAAA CCTAATTTCCCCTCGATCTTTTTATCGATCTCATTCGTAGAGACTTATCA ACTTTTAGGTGCCTTGAAAAATCATGTTTAGGTGTCGTGAGGGATGAGCC CAAAAATCTCGTCACATCTATTAACGAAAATGCTTAATACGCAATCAAAC TCTTATCGAAAAGGCGCGAGTATTAGAATCGCTAGGTGCGACAAAAACAT ATGAAGCAATTGAGAGGTCATGCAATATCCCTTTTTATTGATGTTGACTT TAAGTACAAAATATTTCTTGCATAAGAAAACTGAAAGTTAGCTTGTTGAC TTTTAATTAGTTAGAATCAGAAATAAGTCTTTTTTTGTATGATACTTATT GCTAAATAGTCCCAAAGGTCCTTTGCGAATTTCGAAAGCATATTATTCTA GACAACAATAAGTAGAAACTTTATAACGTTGTCAGACTTAACCATACATG TTAAACAGTTTTAATTTTCTTACAAGAAAAATGTTGATATTAGTTTTAGA GATGACATCAAGATTTTGATTGCGTCAATCTCAATCGATGATCAAAACAT GATGTGAAAACCGGGTGCGTTTCAATTGTTTAAGAAAGCTGTTTGTATAA AATGCCTGATTATTACAATCAGAACTCATCATTATTCATTTTAATGAGGT GCGTCGTATAAAAGCATTTCAATAGCTCACAATGGTTAGTATGATCAGTC AGTCAGCATCGGAAGTTAGACCTGATAACAGCTTATTTAAATCTATTCTG TTATTTAAACATTCTTTACCTCTTTATTTCTATAGAGCGATTAAACAAAA ATAATCAAAAATCAATAAAAATAGAAGTGGTATTAACGAAAAGAGCTTGA GAAGCAGTCGACAGTTATTCGATCGAACAACGCGAACCAATCCAGAAGCT TATCCGTTTAAGAAGGCTGTTGTTCAAGTTGGGTACATAAATAGGACAGA TCGAAAGAGAAGAGAACTTGGGAAAATTGAAATAAGAAAGATGAGATCAC AACAAGAAATTCGTATCATGATCCTGGGCGATCATTCACTCTGCTTCGAA CATGTTTTACGACCCTATTTCAACCTGAAAACTGGACAAGATACCAAATT CATCCTTGAAGAATGCGAAACAAAAGGAATCAACATGAACTTAGACAAGA AGCCTGTTAACTTGAACGTTCGTGTAGCTACCACACGGACAGGGATGTCA CGTGTGCCAATGGATAAGATACGAATCAACGACTATAAACGCAGAATGGA AGATATTGATGTCATCATGCTGTGTTACTTCCAAAACAATTCCAAAACAT TATACAACGTCCGCACAAAATATTTGGAAGAAATCAAACAATACTTTCCT AAAACGCCTTACTTTTTGGTCGGTGTTAATATTGAGGAATCGATCGACGG ATGTGTGAATCCACTCAAGGAGACAATTAACATCCAGGACCGATGGTTGA AACGCGATCTACAAGTCACCTCCAAAGAAGCTAAAAGAACGTCGCGGAAG ATCAAAGCACGCGGCTCCGTCCAATGTTCCGTGTTGCGAACGAGTGAGGA AGGGACTGAGGAGAATCATAACGAACAAGAGGAAGCCGTCTTTGATTACG ACGTCGATAAATGTAAAACCGTCAAAACGGCTATCGATAAAGTCGCAAAG TTTGCATTGAAACGGAAAAATGCACCCTGTATTTTCCCATTCAAACAAAT TNTGTGAATCCACTCAAGGAGACGATTAACATCCAGGACCGATGGTTGAA ACGCGATCTACAAGTCACCTCCAAAGAAGCTAAAAGAACGTCGCGGAAGA TCAAAGCACGCGGCTCCGTCCAATGTTCCGTGTTGCGAACGAGTGAGGAA GGGACTGAGGAGAATCATAACGAACAAGAGGAAGCCGTCTTTGATTACGA CGTCGATAAATGTAAAACCGTCAAAACGGCTATCGATAAAGTCGCAAAGT TTGCATTGAAACGGAAAAATGCACCCTGTATTTTCCCATTCAAACAAATT TAAAGAAGGAGTTTAAAATTCTTGAGACAATGTGGTGTCGCTAGATAGAT TTTAAAGATAACGAACTCATTAACCCTCCTATAAAGATTAATGATTATGA TAAAAAAGCAATTAAAACAGGGGCAACCCTATCAACCGCTGTACGTGCTT TAGAACTGAGAGCAATTCAAAATGCTTGAAAATTGTGTTTGTTTTTTTTT CAAACTGTAAATATTTCTTATAAATGAGAAACAATTGTAAATATATTTAA AAGAGAATTTTTATCATTAACTTGTGTGTTTTTATGTAGGGAAAAAGTCA TAACCCAAAAACAGATAAACATAAATAAACGTTACGAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00068823TCONS_00068823Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
Rho GTPase family proteinTCONS_00068823-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_49supercontigscaffold_49:28971..34060 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02 0.07 0.17 0.43 22.27 17.23 4.73 5.76 38.17 41.82 21.92 54.69 58.19 39.55 59.42 27.87 28.57 35.28 43.53 60.07 9.06 7.74 6.08 4.65 8.96 6.04 166.87 108.11 97.49 91.31