XLOC_042928 (gene) - C. hemisphaerica

Overview
NameXLOC_042928
Unique NameXLOC_042928
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_49:727518..733158-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042928 ID=XLOC_042928|Name=XLOC_042928|organism=Clytia hemisphaerica|type=gene|length=5641bp|location=Sequence derived from alignment at scaffold_49:727518..733158- (Clytia hemisphaerica)
AAAGAAGCGACAAACATTTCACAGTGGGAGGATCACAACAATAGAAGTCT GCCAGTCACCAGTAGCAATTTTATGTTGTCAATATTTATTTTTTTATAGC TTTCATTAGAGATAAAAATTCAAAGGCATTAAACTGTTGTGATGTGAGAG TGACTTCAAGGAATATGGATAGTACGTTTGTTGTGGTAAGCAATTTTTAT TTCTTGATTAACAATGATTAACAAAAAGACAGTCAGAAGAAAAAACGACA GTCAGCCCCGGACATAAGTTAGCATCTGATGGATAAGATTTCAAAATAAC AAGACTTTTGACTGGAAAAAGTTGTAGTTTAAAGCCTGAAATAGGCGTTA AATCATCTGATGAACAGGTTTAGTTGGCAGACGTTTGTCTTTGAACTCAG AGAGAGAAAAAAATAAAAACAACGATCCTCATCCTCTCCTCCTGCTGACA TACCCACCAAACTCAAGGAAGCTTCAGGTGCAAAATGTTTTATGTGAAAT GAGAAAACTTTTTGCAAGCAGAAAATCCAAACACTGGACGACCCGACTAA ATCAGACCATTTTCTGTCTGACTGCTATGTAAGCAAAGATTTATAGATTC AATGACCCATCATATGACATATGGTGGTATAGGCCTGAATATATCCTGAA CATTTTTGGGTTATGCTGGGGCAAAAATAGCGAAACATTCTTTAGGCCAA CATTGATGATCAGGCCATCAAGTTCAGGTCACTAAGCTTTGGGTTTCCAG GTTTGGGTCATGTTTCGGACTTTATATTTCAAATTCAAAATGGCCAAGTT TCCATTGCATTTACCAGCAGAGATTTTAAAGTTACATGAAATGACACTTT AATTTAAAATGACCCCACAATCAAATAGACCTTTTCGCCTTTCCCACCAT ATTGAATTGTATGCAAAAATTATGGTGGCCAAATTGCCGTGGCGAAATTC CCTTAGAAAGTATGCAAAACATATGCAAAAAGAAACTATTAATATAAAAC CTATATACATGCATAATTGGCATTATATTAAAGTGTGATCTTGTAGAAGA AAGATTAAATTTGCTTCTTTTGAAAACTAGAAATAATCTAATTCGCTCAT CTCTTAGAACAAGCACTTCAAAGAACCATAACATTAGACATAAACATAAG CTGAAATATCACCCGCGAAGGTACAAAAATAATCTATATTCGGCTGACGG TAAATTATTCTCCTGGGAATAGAACCGTCAGACAATCAAATCAAAACATT GATCTGAACCCGCTAAATGTGTGACATCATAATTACTGCTTTCAGTTTGT GTGTTTTGAAAGTTTGATGTGTGTATATACTCCGTCTTGGTGGAATTTTT TAATGGCATGAAAACAGAATATGCAATGTCTTTAAGAACAAATTTCTAAA AGGCTTTTATTGTTCTGTAAATATTTCTTTTTGAATTAAGAAATTCCATC TTTTATTGTTCTGATGATTATAATATTTCTTTATACTGTAAGATGCTTTG TTGTCTTTGTAAGATGCTTTGTTGTCTTTTTAATCTTTGTGTAAACTTGC ATATGTTTTGCATATTTTCCAACTAAATCCAACCACGGCTTTTCGTTCCT CTATTTTTGCATACAATTCAAGATGGCGGATGGAAAGGTGAAAAGGTCTA TTATAGATAGACAGAAGAAAAAAGTCCATATAATTATATCTTGCATTTCA TTCAGAATAGCTCAATTTTTCTAGCCATTAATTCTGTGGCTGCATTTGAA AGGGGCTCAAAAGGAGAGAAACAAGTCTCCAAAATATGCCTAATTTATGC CTTTCCAGAGTCATCTGATAATTTGTAAATTAAATTAAAGATAAATAAAA AAGAATAGAAAATAGAAACAGCATTTTGTATTAATAGATACCGACAACTG CTCTATCTTGGGACGATTAGTCGAAACATGGGACTGTTTGATATCTGGCC TGTATTTTCACTTACTGTTAAATCTCTTTGACAACAAATTTGTTTTGATA ACTCCACCAAGCTTATGATTAAGTTTATCATACTTTCTGTCATAACATGT CACGATAACCTTCGCTGATAGGGCGCCCTTTTTAACTTTTTTGTTTTCAT TCAAAATGACCGGACACAGATTGGAAAATTAGAGAACGCCGCCTATTGCC CAATAGGATTGACAAATAGCGAGTGTGTAACTTGCCGCGCGAGTGACGTC AAACGCTCCATCGTTTTGCCACTAATTTGGTCTTCTTCGTTCCAGACATT CACATAGTGTCCCACTATGGATTTTTTTCATATTTTGATTTAAAAGCCTA CTCGGTGCGAAGAGAAATTGTGTATTTTTTAATACGCAGTTCATTGACTC AAATCAAATGACTTTGGAGGTTCTGTGAAATGGTGGCTGAATTGCCGTCC CATCTGAGGAAAATAGTCCTTCCGCAGAAAATTTCAGTGTGGTGGGCAGA AAACAACCACAATCTGATTTCAGGCTATCTTTAAAGTAAAATCACCCATT TTGGAAATTGCTAGTCAGTCATAAAATAGTGTAAAATTGCAAATCACATT CAAAATCAAAACATATGATATATGACAACATATACACATGATATACCCTG AAGTTGAGTAAAATCTTTGATCTCTTACATCATAAGCAGATTAAGTGATA TTTTATTTCAATTGTTTCAATTTTATGGTTTTCTTTATTTTAGGGGTCAA AAGTATGGTTGCAAGTAGATGACGAATGGCAACCTGCTGTAATTTCTGAC AACAAAGATGGTCAAATATCATTTGCTATTGACAATGGAAAAGTATGATT TTCATATTTCTTGCTGAATTATTCACTTCACAAATTTATTGTTCTTGATT GTATAATCTACATCTAATTTTGTATTTAAAGGGTGCACCAGAAATCACTT ACCCTCTTTGATTTGAAATAAAATTGAAATTTCTTAAGTTTTCTCATAAC TTTAAAAAAAATCAAATCTTGTTTAAATTGAAACTTGAATTTTGATATGT CATTAATCCAATTTTGTACACTAGATCAAAAGTTTAAGATGAAAAATCTT TTGAAATTGCTCAAGATTGTCAAAAGTGGACTTATCAAAGTTCTAGTTCT AGTAATTCTTTGTAATACCTTTTGCTTGAATAAAGTATTTCAACTGCAAA TAAAAAACAGAAATGGATGCCTTTTTAAAGTCAAAATTGTGCTTATTTTG TTAGCAAAAGCCATAGCTTTTATCAATTTCCCATTGTTTAGCTTTTTATG AGAATATCCTTTAAATCAGCCAGAAATTGATCATTTCATCATTGAACTGG TGTAATTTTTACACTCTTATGATTGTTTTAATGAATTAAATAATTAAATG CGTTCTCTATTATCATGACTAAAATTTGACTATAAAATTTGATAGGTTTG ATTTGTCATGTTTTTGAGGAATCTCAGAATGGTGTATAGATTATGTTCTA CGTTAGCACCAATTCGATGAGCTATCAACAAATTTTTGAAATATCTAAAG AACTCAAAAAATTTCAAATTGAAGAGGGTAATTTATTTTCTTGCTTACCA TACCTGGAATAAATAAAATATGTTTTTATTGATAATTTTTTACGATAGGC TTTGAGTCTACCTTTAAATACCATCAATCATGAGACAGCCATGCCAATGC ATCAAACCAGTATTGATGGTGTTGATGATATGGCAAAGCTTGGAGATTTA CACGAGGCTGCTATTCTTTACAATCTATACCAAAGATATATGAAAGATGT TATTTATGTAAGTTTTATTACCTAGTAATGACATCAAATTGTACACTGTA GAGTTTTACCATCTCAGCAAGGTACAAAGAAAGGCTTTCCCTCTGAGACA TAGTAATTTGCTCTGAGGACTATTTTTTGGGTTGATCAAAATTCTTTGGT GTAAATACTTGCAATATTATAATTCTGACAAACTTGCCAGCACTTGCCAA TGTCTCTGCTCTTCTTTAGACTCATATTGGTTCAATCCTTGTTGCTATTA ATCCTTACAAATCAATAGAAAACATGTATGGTCAAGATGTAATCAAAAAA TATGACAATAAATATCTTGGTGATATGCCTCCACACATTTACGCTATTGC TAATGAGGCATACTATGCCATGTGGAGAAAAGGTGGAAATCAATGTGTGC TCATCAGGTATGATTTTCTTGCACTAGCAAATAAAACAAACTTTCCTTCA AAAAAGGGAGGTAATTGTTGAATCCCTGTAATATTTAGTGCTTTTCTTGT TTTTGTTAATTCAATTGCATCACTTTCAATTCATTTTAAGACTATTCTCA TGAAAGATCTACACAAAGATAATATTTGGTCACAGAATTCTTCTTCATCT AGAATCAGATTCTAGCCTTAAACATTTTAATGATAAAATGTAAATGAAAA ACCTAACAATCTATTTCAGTGGTGAATCAGGAGCAGGAAAAACCGAATCA ACAAAATATATTCTTCGCTTTCTGTCTGAAATGAGTCGAAGGGCTGTTGA AGAAAAGGAGTTAACAGTTGCAGCAAATGTAGAGGAAGCCATCGTTCAAA GCAGGTAGGCTGTGTGTTTTTTATCTGCCTATAAAAGCTTGAAAAACCAG TTAATTGCAAAGGGAATGGTGGCCAAGTTTGTTTCAATATAATCTGCAGT AATGTAGAATTGTGCTAGGATCACGATTAACAAATCAAACCAATCAAGAC TCTGATACCAAGTACTATTCTTCCTCAAGCTGAGCAAGCTGGATGTGGAC TCCAAAAATTTGAAAAACACTTGCATTGTTGTTGTATTTTCATGTTCGTT TCAAAACATACCTTTTAATTTGAAATTTTCTTTTTTACAGTCCCATCTTG GAAGCTTTTGGTAATGCAAAAACAATTTACAATAATAATTCAAGTCGTTT TGGCAAATTTATGGATTTGTATTTTGGAAAAGAAGGAAACATAACTGGTG GTGTCATTGTTGATTGTATCTTTTCACCTAAAGTCATTCTTCGATTCTTC ACATATATCTTTTTTGTCATTGTTTACCAAGAAATTTTCTACAATTTTCA TAGAAAATCACTAGCCGTTCATTTTAAACAGATACCNAAATGAGTCGAAG GGCTGTTGAAGAAAAGGAGTTAACAGTTGCAGCAAATGTAGAGGAAGCCA TCGTTCAAAGCAGGTAGGCTGTGTGTTTTGTATCTGCCTATAAAAGCTTG AAAAACCAGTTAATTGCAAAGGGAATGGTGGCCAAGTTTGTTTCAATATA ATCTGCAGTAATGTAGAATTGTGCTAGGATCACGATTAACAAATCAAACC AATCAAGACTCTGATACCAAGTACTATTCTTCCTCAAGCTGAGCAAGCTG GATGTGGACTCCAAAAATTTGAAAAACACTTGCATTGTTGTTGTATTTTC ATGTTCGTTTCAAAACATACCTTTTAATTTGAAATTTTCTTTTTTACAGT CCCATCTTGGAAGCTTTTGGTAATGCAAAAACAATTTACAATAATAATTC AAGTCGTTTTGGCAAATTTATGGATTTGTATTTTGGAAAAGAAGGAAACA TAACTGGTGGTGTCATTGTTGATTGTATCTTTTCACCTAAAGTCATTCTT CGATTCTTCACATATATCTTTTTTGTCATTGTTTACCAAGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00068899TCONS_00068899Clytia hemisphaericatranscript
TCONS_00068898TCONS_00068898Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00068898-proteinTCONS_00068898-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_49supercontigscaffold_49:727518..733158 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.95 5.01 2.09 2.01 20.8 14.56 19.5 23.13 10.16 18.65 11.28 8.58 11.23 11.48 7.73 11.77 12.52 13.31 11.54 14.45 9.84 11.61 4.95 7.36 16.34 15.93 14.46 12.85 11.99 11.92