XLOC_042979 (gene) - C. hemisphaerica

Overview


Name	XLOC_042979
Unique Name	XLOC_042979
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_491:171945..179956+

gene from alignment at scaffold_491:171945..179956+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_042979 ID=XLOC_042979|Name=XLOC_042979|organism=Clytia hemisphaerica|type=gene|length=8012bp|location=Sequence derived from alignment at scaffold_491:171945..179956+ (Clytia hemisphaerica)
AGAAGACATTGTCTTGAATACCAAAATCACAATGCAAGGAGTTAATTTCG
AATTTCACAAGGACTATGATGTGCCAGCTAGGTAGGAAATAACAGTTAAG
TAGACTTAGAGTACTTGGTCgcaattttgaaagaaaaaaataaatataag
atTGGCCCTATCTAGTGATAAAAACATTACAATTCATTTTTaacttccaa
aaacaactaaaacctggtaaaaaatgaatttttcttttcaatcagGGCAC
AAATACGATGTTTTGGTGCTTCAGAATTGTCAGCTATTCCGTTTGATATG
TTTAATGTTNTTCAATCAGGGCACAAATACGATGTTTTGGTGCTTCAGAA
TTGTCAGCTATTCCGTTTGATATGTTTAATGTTCCTGGCGAAAAACCTAT
CTTCCAAATTCAAGAGTTTTCTTATACGCCTTCCTATATGGATGTGGAAG
AATTAGTGAAAGGAAAACCGAAAGCAAAACCAGCAGCTAAAGAAAAGCCG
AAAGCAGCTAAAGAAAAGCCAAAAGCAGCTAGATGGAATTCTCTACCAAA
ATATGACTCTAGCAAACACAAGAGTTTCCTCAGAATTACTTTTGTTCTGA
CAATTCCCGACAAATATAGTACAATACCCCATACATCTATAGGTGagcat
aaaaaacatttttaacataaCATTGACATTTTTATCAACATGGTTTTGGT
CATGACTTTTCATTCCCATTCGAAGttgaatgtaaaaaaattcactccga
AATCCCACTGGACTTTTTAGCTTGTCACAATAGAATTTcgatccccattg
ggatttcgataggaaTCTTTATCCCCACTTTGGGgaaaaattccaccggg
gcttAGCTtgccggggctgtgagacaggggtgtgaatGAGAATTCGCCTT
GTTATATTAAGTTTAAGATATCTGTTGGAGAACGTCTTAAAATTTGCCTT
TACTGATATTTCGACTTTTAGCTAAAATAAGATACAAAAGGAGAACAatt
ataaaaatgagaaaatatcgaaatattAAACTAAGGGTCCTGTAGCGCAA
GACCATAATACAAGAGACTCTCAGAAAAACATGACCCAAATCACAGAAAG
CTACACTAAGCAAACACCACAGAATGAAAGAAGCACACGAGCAATAGATA
ATTTagaaaatactaagaaaataaCGTAAAAATAAACTTACTAAAAGCGA
TTCCAGCGTGCACTAAAGCAAACACATGCTCCAAATAAACAATTAGTAGT
TTATATAAACTTCAATGCCTCTGTAACTtcgagaagaaaaacaaacactt
TTTATCTCGACATAGAGATTtactttatttcaaaattctcaaCATAGAGG
TCTTCTTTCTTACACAGCTTTTTACACCGTGATTATCGAAAAGCAAATGA
ACAAAAAAGGAGTCGCTTCTGAGGCcacaaaatttctaatttcacAGGAA
TACATTAACTGTTAAGAATATCTAAGACaaaaaatgcaattaaaattaaA
CTAGAAAAACAAAAGGAGTTGTAATAAAAACTTGATTTGCATTAGCTATA
AATTAACGTATCGTTGATTGACGTCATATCATATGGGACTATTCCCATAA
CAATATCATTCTTCGTTGCTGTTAACTTAGCAGATGAGACACTTAAATTA
GGTGATTTGATAAAGCAACCATCAAGTAACAAGGCGCTGAGATAAGATAA
GTCTTGTCGCTCTGCCCTACTGCAANATTAGGTGATTTGATAAAGCAACC
CTCAAGTAACAAGGCGCTGAGATAAGATAAGTCTTGTCGCGTTATATAGA
CTTTGCGAACGTTAGATaagcgttgaaacaacgttgtgtgccaactggga
aAGGTCTTTGATTGTAGAGAAATCTAATACTTCAAAAGCACTCTACTAAA
CGAATGTGCGTGTtagagttttagaaaaaaaaacctcAATCTGCTTTACA
GTAGTTGGAGTTTTGTGTTTATtcgattttttcaattctttctaATTCTG
TCTACTTCTAGGGCTTGGTCCAATCAAGTTCCACATTGATCAAGTACCCA
CAGGATGGAAAATCACTGGCCTTACcacaatcaaaataaaaggtttGCTC
ACATTAATAACCCTTAAATATGTTAgtactagccataattttcattaaag
tgccacagcagaagaacgatcaaataagttgttgaatttggaaagaaatg
ttactgatgaggcccccccagcgacaccgctaatcacgccatcacgcaaa
aaaattttctccatcacgcatcacgaaaatcgctaaaatttgtcatcacg
caaaaaatagcgaaaaatagcccaaatcaNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNattgattgattgat
tgattgattgattgattgattgattgattgattgattgattgattgattg
attgattgattgattgattgattgattgattgaaaaatatatattccatt
aattaacaaaatacttgaagaattcatgcagcttgataatttaataaaat
ttaaggaaaagctgggaaagcttctcaaaaatatatttcaaaagttatgg
tatCATCAGCTCACTGGTTTTCACATctcttctttgctttttttctccta
gtttctttcttacaacaatatatgtcatgattattattcactaaatagac
ctttcctgataatgctgcagacatcttagattgtaggcaaaatatatagc
ggatactgcgtataaaatttatcaaaaggttctgcgccatcttaaattgg
gtgaaatagaaactaatcctagttaaggcccgggctccattTGCGTACGC
CGTGATtacacttctcaagcaaaatcttctatgttgtttgtcaaaagaaa
aataaagaaatgccattgtggtccctTCAGATGTatagtcgagaaaagtt
gaaatgcgcctaaattttttttcaagtgcatagtactttttaatgatgca
atcttttctccaaactgaaaggattgaagccattaagatgatcacagcgc
agacaatgaagacaCGTGTGCCTTCagaggaagctagactttttgaggtT
ATTGCTATATAcattcactttatggtgtttctgtatgactgtctgtgtac
ctagtctaaccaccgttaaaagccttcgggaaggtccctcctaacttgga
aagacAGAATttgagctatttcaccaaaccactggagcgtaagttattta
ggctatcacaactgcatgaaaaagttgaacgtgcgcatgtaaagttagtt
tttaggcttttaaaatagatttaccacacttaacaaacagtgaaaacatt
ctaagtgaggtaaatctatttttaagactaaaagaaaaagtttgttttca
ttgattgacattcattcgaccacttttggattcaactttacatatgcgta
cattcaacttttttgtactttgccggtatcttgttttaccaagttaagaa
ggactttctcgagttacgaccatatgatgatctttaaagctcaagaagct
ctataaacaataaaggtagttattaaaaaaataacagACAAACATAAATT
ACAGtctgaataaaaatatcaaatgtacatttgaaaaattaagccaattt
ctttaaagattctggaaaaagaattaaaatcattgctggaaatgaacttc
tgactaaattacagtagttagtattcagtttcaaaaacaagaaacaaaat
ttgacatacaaaacacttttttcagtcaatgaatcagctcatcatcataa
ccagtctgccattttttttattttgacttgcacaagtaatattgtaattc
gtgttatatatcatacactgttttaatttgcatttataacactcgcatCT
GCTTTTCAAAGCtgaatcaaaactaataaattgtaatatgtaataatggt
aatagcatataacgaaATATGACCCGtggggggaggggtactagggcaag
atgggttacgggaNACCCCCCTCCCCCGgggaaatatgaaaatattacaa
aaaccgaacatttaaggaggagactaactacggggatgcttgtgcaacaa
aacaaacaaacacgcgcaacaaaatttcgagattcaagtccaatatctat
gcgtgaggCTATGAGCGCCTCCTCGtagctacgctcctgcgggggcaata
atggtttgtttatatcatactaaacgctactgtactgtacattttactgt
aatagtcaaacgacaattttttgaaaggataaaaatttctaatttccgTT
GCTCAGAGCGGTTAATAACTGCTTGTGGTTTagatagggaatttcccagc
aAAAAAGGGATTTCCCTTAATTCAactccctgaggtaataaaaaaagaca
ttgagctttgaaaatgggtaatcagatcaaaacaaatccgGACAATTGTT
TTTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTCAGTCACCAcctaccatcagatttatcctagtgactgaa
tcaaactagcttagatttctaggctactggaaaatgttaaaatttgcaaa
agaccctcttggaaaaattcttttcatatcctaaaagtgagggtggacga
gcTAGTATTTTgtcccctggaaattttgaaatataatgaaaaaatgcttt
tttattaTCCCTTTTTTATAATTCTTCTCTGATTGACCtttggaaatgtt
cgtccaccccttgTCTGGATACAAAATGGACTGGCCCAACGACCGTCAAT
TTATGAACTTTATGAACTGATGGGTTTTGTTTACCTAACACAGTGATTAG
AAAATATAACTTCAAAGAATAACTTCTGACGTTTTAATTTGCAGGAATGA
AATACAATGTCAACGTGGCACATGCACTTGGAACACCCGGCTGGAAATTC
ATTttacaaattccaaaaatgtttgtaaaagattttcacaACTTTGTTAC
TGGTAATGAGGATGCAGATTTAGACACTGGGACTGCCCTTGATTCGTTTG
GAATTCAAGATTTGAGATTCGAGTATAATATCAATCGGGTAGTATCAAAC
GATGATAAAGGGGAAGAAATCAAAGATAGCAAAGGAAAACCGAAAAAGAA
AACCGATTTTGGTGATGTCAAGTAAGTCATTCAATTCAGAGAGCAAAGAC
TTTGCTCTGACGGATTGAACAGTTGAACTGGATTGAATTTagctttttct
ttgctttgcgTT

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00068974	TCONS_00068974	Clytia hemisphaerica	transcript
TCONS_00068975	TCONS_00068975	Clytia hemisphaerica	transcript
TCONS_00068976	TCONS_00068976	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00068975-protein	TCONS_00068975-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_491	supercontig	scaffold_491:171945..179956 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.24	0.31	0.63	0.18	0.53	0.08	0.31	0.19	0.27	0.08	0.08	0.26	0.05	0.11	0.04	0.1	6.3	6.41	0.17	0.44	7.1	6.84	2.25	2.81	3.12	4.29	1.28	0.81	0.47	0.18

You are here

XLOC_042979 (gene) - C. hemisphaerica