XLOC_043261 (gene) - C. hemisphaerica

Overview
NameXLOC_043261
Unique NameXLOC_043261
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_5:74656..84877+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043261 ID=XLOC_043261|Name=XLOC_043261|organism=Clytia hemisphaerica|type=gene|length=10222bp|location=Sequence derived from alignment at scaffold_5:74656..84877+ (Clytia hemisphaerica)
attataaactattattgtttttttttcagcaaaatatCGAAGAAGGAAAT TACAAAGCAATGGCTTGTGATATTTAAGAAGCTGTTTTCATCATTTCATC CATTGATGTGTGATTTTGGAGCTCTTACTCTTCAGGAAGAGCAGTTTTGC AAGACAATCATTAGTGTTGGTGAACaatttctttttcgcataaaaacATT TTCTACTCCGAATAGTACTGTAATATTATTTTTACCAACAAATCCGAGAG GAAGATTTCTCATACATAAATGCATTGAAACTATTCCAGAATTAACCTCT GTATCTATTGGTAAATCTTTCCAAAGGAGAGTTGTGATTTTTACCATTAC TAACAGAAAACTTAGCAAAAACAGCATAAAACGAAGAAGAGGACACACAA AATCCATCCATTCACCTCATTTTCAAAGAACAATGTCATCACCAAGGTAA AGTTGTTTAAGATTGATTCCTGATTGAATAACTACCGTGAAGCCGTGAAG TCGGGTATAAACTTGCATcggtggagggaaacttgcatcatagccatcaa atgacttaccaatcaaagcagcaaaatttcaaaacaaaggaactaCCCAG CTCCGCTTCCAGCTCTACCctacagttagtcacactagaaaatcaagctt tcagaaaaaacaatatCAGTcttctacaggatgtatttgcaacaacaaga atGAGAgtttacctgaatcaagttcgagttcccaagacaattaattaaaa cttaaaTCGAGACAAAATGACTGATCgcaaacgtgcagcagccagaatat caaccaaccaaatatTGTCATTCAATTCCAGAGACAACAGCACTTCGATT tctaaggccttgtttatacgctaaagtaaaagtaattccacacatgtaaa tgggtcagtgtttgaggtctgacaaaatttccgggaaatagcctgtCCGG CGGTGCGTGGAACGGACCTAGGTGGGTTTcttctcccccgtagatctttt tcttgagaagttgatcttcaaattaccGTCAATTGGTCTAATGTTGATAC CCCTTGTCTAAATTCGACTGCTGAAAATTAAAATAGGTTGCaatcatttt tctttccttagtggtaagggaggataaatcatttttcaatcaccgattct aattttcatattattcctatctctaaagaagggtgtcgaagttagaagac ggatgtcgagattagaccaacttacggtagtttTTATGGTTGCGGCGAGT CAAgtaccgtgagagtgggtaacttgcatcagtggaggctaacatgcata gccctaaaatgaatgacctggctggtcattgaaataaactatattcagct ccgctcgcagctctagtctaccatttttgttttgatttaactttgtattt taatgaccagacgggtcattcatttgagggctatgcatgttagcctccac tgatgcaagttacccactctcacggaAAACAATACAGCGCTTTCccgcat taatctttgatatacGCATTTCGgcaggacgctagtgtgactaactgccc taccattttagaatctcatATTTGCTGTGCGAGTAATTTTGGCGAGTTAC TCGCCGACAGAATCACAGGTAAATGAAACAGGGTGGGTTGGATAATAAAA ATCATGCAAGGTCATAAATTTCAAGAAGGGGGGAATTCAGACATTTCTCA TGGACATTTACAGTAACCTCAAGTTTAATAATGATATCAAACataattat gcatgtcattcatttgagggctaccatcaactgctctaacttggggcGAT TGGTCTAAACAttggactgttgatatctggcctgtattttcacttactgt taaatctgtttgacaaaaaaattgtccaccaagtttatcaatcatacttt ctctcataacatgtcacgagaactttcactgatagcaagccctttttaac ttttttgttttcagtcaaaatgaccggatgccgattggagaattagagaa cgcccgccacCTAACTACCTATCGCACAATGGGATTAACTAATAACAAAT GTGCAACTTGCCATGCAACTTGCCACGCAAGTGATGTTCAACGCTCCATC GCTTTGCCattaatttgttcttcttcgttccagacacttgcgtgtgttcc actacagatttttctcatattttgatttaaaagcctactcgatgcgaaag agaaatcgtgtatatttttaatacaccgttcattaactcaaatcaaatga ctttggaggttcagtgaaatggtggccgaattgccgttccatgttttgtc agatagtcccaagttagagcagttgacagtatgcaagtttccctccacct atatataacaatccaaaaattcccttaacaatcaaatcaatttgATTTGT TAAAACTTGAAATTATGATCAATGATGTAATTGACCTTAATAACCAATCA TTTCTCAAAATAAGCATTTGTTTGTTAAGAGAAATTTTGGATTGTTATGG TATAGCATAGGTAAGTACAGCACTAGCTATAAACCGGATATCCAGGGGAT ACTTTACAGTCAAGTTTTTACAGGTTCgatcacttgccaagtgaactgtt GCGAGTGAGAATCGAACCTTAGTCgtctgtgcagcaaccaaggttaaTGA CCAAAATACCACAGCGCCTTACAAtggaaaataaaccagctgcgctggaa ggtcagccaagtaagcttaaaacgattagaaggaagtacaatcaagaaac ctaattcGATTAAAGCCAAAGAGgttgaaaagctcattttggttgaactt cagacaaaaaagaaagttaaacACAAAGTTGAATTTGTTTAAAGCAAACA GAGATGTGATAGATTATTTCATCCTTggagtttatttatttttttctcca gtcaAGGCCGCCCCTCCTTTATAGTTGAGTGTGCACGGTTCCGGGGGGCA TTGACCTTGACGGCAGACGGGGACGtaccgctggagtttgaaaactGGAc tctgtcagatatgaatttttggcaaaataggGACCCTTGtcagaacaaaa aattgaaaatttttcccattttcgccCTGAAAATTAAAGTGgacgaaaat ttgaaagattttctgttttccaccctgaaaattgtccaaaataataaaaa atcgaccctgtcagatacacatcttaaaaattagtaaatttgggaaccTG TCAGACATCTTCAGAACATCCTAAATAAAGGAACCCTGACAAGCGGCACG TCCCGTacccaaatttgcctaagtgcctCTCCCGGGGCACGGTTAGCTGT CTAGTAATCAGTTGAAAAGAATAGTcaattgattcagattgatttaaatG GAGTGTTGAACCTAGTATAATGTGAATGAATAGGGGCATTTTATATTGAG GAAGCTGCTTAGGaaattccgtccagtttcgataactcaatcaaaagtta tgacgattcTAAGTTTATGTTACGCCACACTTGGACGTTCCAGACCGTTC CAGACAAGAAAGCTtcaaaaccaatcataaaaaactttcttttacactct ctatttatttacaatgcaatagcttctttcaatttattgaataaacaaaa aaaattcaatcataataataaagctttacaggtttgcaggccaccgtgaa gacacatgggcctctataaaccgctcgtactttttacaatgatctttttg aaatagagtttttttCGCGGGCTCCCCCGGACTTTCCATTTTGTGTTGTC TTCCTTGATTTTAGCATTCATTTTTCGGCTTCCTTACACCATTCTTTAAT tatctgtctttcatttttggtcaaatcctctgtcacttggtaaggaaagc ctttttcttttgatattgcTTGCAATACTGTGTTCTTGTCCTCTTCGTTC GTAAATGTGACATTAATTGGTTGGTATctcgctttatcttctctttcttt cgtaaatttcccgatccgctgcgtctctgtaatctttatattcctcagat ggagccgccgaccaataattttgtcatggagaaattcttcgtcctcgatt tttgtttcttcagTTTCATCTGTCGATTCATCAATCCCATGGATTGATTT CGTCCGAAAACGAAATTATAAGTTGAGtcttaaacaaagaaaaaaatcgt gaaagggatttgaagggtcaccggggctgaccaatTAGAAAACTAAAGTG ACTAAATTAGTGACTAAATACCCTGTGTATTTCATTGAGAAAATTAGATA GataaaattctaattttgttGGTAATTTATTTCTTGCATATTTCAAGATT AttgaagtaaataaatgaaGTTGTCGTTCAGATTCCTCTTTAgacaaatt ttgatttaaaggtCAAATTAACACATTATACCTAAGAAATCTTATCGCAT TCACGCAGGGTACGGAAAAACCGTTGGAAAGCTCATACAATTTCAAGGAC GTGCCAAACTGTTTTAACGCTGcacaataataacaataaatataaataat aatgctttctttttcaacaaattattatttacaatgaaatcagTGTAGGA CTTTGATTTGATTGTAAAAAGCAGAGTTATAGATGAATTTACCAGAGAGC ATTCCAatacaaatcaaaaatatttttcatctttttagaaatgTCAAAAA GAAGCCCGATCAAGCAATCTATGTACCAAGACATCGAAGAAATGGATCTC CTATCGCGGAGgataaaaacaaacacaatAAACCAACTGATGATAGCAAC CAAAAAAAGAAAGTTCGAAAACAGAAAGATctgaaaaatgacaagaaatt tGAATCATCTGAACAAGAGTTACTATCTAGCTCAAATAAGGAACACAATT TGAATGAAAAGGAACctctcaaaagaaaaatatccaatgaaaatacaata aacactgaacatgttaaaaatacaaaattaattctggattgtgcaaaatg tttAGCAGAAAGGCTATCACAGAGTATCATCTCTGATACCTACCAGAATT TAAGAGAAAACGCACAGCataaaaagccaaaaagaaaaattccaaaagTA GAAGTTATAGTAAGACAAGAAAGAGTTCTGCCAGGAATTGCAAATAATAT TGTTAATCTAGCAATCGAGAATGCAATGCAGATGATTACAGCAATTAAAA TCTACGATCGAAAAAAGGAATTCAACATTGATTCTGCTGCTAGTTTGAAA TCCACTCAAACTGAAGTTGCATCACAAAATCTGCCTGAAGTTAAACCAGA CACTGATAATAAACCTACCACTGAAGTTGAGCAAGCTCCTTGCAATGATA AGGTGGAAGATCTAGATGACAAAGTTACAAaggaaattaaatccacgcaa aAACCAGTAATGGAGACTAAGAAAGAagctgaaattgaaattttagaaTC CAAGAAAGAGACACACGGTAGTGAAATCACCACAATAGATAAAGAACTTG ATGCTAAACcatcgaaaaagaaaaagacgtCAAATATGGTGAAAAAAGAT GAAAGTGTCAGAccctcaaaatcaaaatcaaagaaaggtaaaaaactgaa aaagcaaaataatcatgaaaaggaaaataaagatACAGACAAAAGCAAGA AAGTTGTGGAGATCGAACCAGTAGTTAATGGTATAGATGAGAAATCTCTC CCTGGGAAGAAGGAGATTGTCAACGACCAGGGAGCAGAGGAACAAGAAGG AGATGATACTTTGGATGATTGGGATGCCAATTGGACTGAGGATGGAGAAT GTCTCAGCGAAGATATGAAAAAAGAGGTTCGGCTCttcaattttgtattt atcaaattttccttttttgtttcttctttcttcatattctttttttttta ttacaagATATTGTCACTATTCGTATATAATTCTTTGAGAGGTGAAGTTC TGTAAGGTCTATAAAATGTATCTTAAACACTATTGTCTTTTGTGTTCTGT TTCATCAGGCTAAAACTAGCCACTAGGGGTTTATTCCATCATTGGCTTTT AGTGGATTCATCCACTAGACCATGATAAAATGTCGGTATTATTTTCctgt tatttgaattttttttctagctATCCATGCTGACAGGGATTGATAAACCG AATATTGAGAATGCTGAAGGGATCGATTACCTCAACTTCACGCCAACCAA GAATATAGAATTAGACCAAGGAGGTAACGGTTTTATAGAGATTTGATCAA TTTATTGTATATAATTTCTCATTATAAATAACAGGCTGATAACTgtgata ccttatcggggaaaacttcatcggggaaaattttcgtcggggaaaaatat ttgtcacttgctggtagttggtaaacggattaaggctggggaaaatttcc gtcggggaaaaatattcttcacttggccaaaatttcgtcacttttccccg acgaagttttccccgataaggtacatgTAAAATTCTTTTCAACGACAGTA TCAAAAACACAAGTGTAGGAGTGCTTAAGTGTGAAAAATGAAAGGTACCT TTGAATTGAAGTAATGTCAATTTAGGTAAGCTTTACCAACGAATAATAAA AGTGGACACTCTACTGCAGACAGAGTTTTTCGGAATTGTCTCTCCATATG AGATAGAAACTTTGCTGAGAATTTGCTTGGTTTGTTTTAAGGCAGTCTAA AAAATATTGAGCGTCGAGAAAAAAACCTCCGTTTGAATAAATTACCTACA TTCGAATTACATGAAGAATCACCTTTCTAATtcgaaaatgttcttaatgg CAGATTTTCATATGAATTTGACAACTTTGTCAATCCTGAAAGGTCTAAAC TTACTTACAATTTAGTGAATTTCTATTTCTTGTAACTTGCTCTTTTTCCA CACTtttcttttccaattttctatTTCCTCTTTTAGAGTTTGGTCATATT GTAGAGATCTTCGATTTTTCACCCTACTTGAAGAACCAAGATATATTCAA TGCAATGAATTCGGCTGGGTATTGACTATTTCATAGGTTCTCATGTCATT CtagaaaaataatttacttaTAAAATCACTATAGAAATCCTTACTTTTTT ATCTCGAGCTTTTTAACAACAGAGAAATTATTTCAATTGTATCTAAAGTT TTAGCTAAAGTTTTATGAACATCAATTATGAATTACTTTTCTAAAATAGA ATCAAAGATTACAACTTGACTTGGGTGGACGATACACACGCACTTGCAGT CTTTGGAAGCCAATCTGCCGGTATGTATTTTTGCCTTAGAGTTTTTCTTG GGGAAGGAGCTGTTAATGTATAGTTGAGGTataaatttatttctttttta taatttttgttggccatcaaaaatcataaaaaaagaaatcaatttaTACC TAAACTAGTTAATACATATAACATAACAATGAAATCGCAAATAGTTCCCA TTTTTGGCCTGTAAAAACGTCTtctcaaaaaataacaaatctaTGACTCA GTGTCAGTGTTCTAAGTTGCATTCTACAGTAACGTTAGTAAGGTaaccta aacttttgaaacatcTTTCAGCTCATTCAGCGATAAAACAATACGTTCCT GTTCTACAAATGCGACAAGTTGTCAACGGTTCTAGAGCGTCCAAAAGTAA AGCAAGAGACTTAAAAGGTGAGCATGTGAGATTTTTTAAGACTTGGAAAA ACGTGCTTTATAATtctaaatttcattattttttcatatattCAAATGTA TCAGTATTCAAAACATGAGATGCCACTGGGatgtattttcatatttttgg gcattttctAACATAATTACATTTTGATTCCACTATCGAAAAAACGACAA TTTAAAAACCATTTTTCTGCTGAAACTGAACGGAATGTACCCCGTTGTTG TTTTTAGAACCTatgaattattattattactataACATATAACTAAGATA CTTTACTCGAAAACTTCACAGCGTCAAATTAAAAGGGGGCGTACAGGTTG TCACGATATTGGCACTTTCggtgttttgaagaaaaaagtaacGTTATTTC CTTTTCAAACATGCCATGCTGTGAACAATGGATATTTTAGCAAGTTATAC TGTGGGTCCCGTTGACGGTGTTCAAAGAAAAACGCGTTTGTATTTCTGTG TACGCCCATCCTCATAACGGTTGTCTCCAAACCTCTTTTTATGATAACAG TACATGAATGATTGTTTATATACTTCTTGTTTTAGAGGTACTTCTTCCCT TCAAGAAACGACCAGAATCAACCGGAATGGTAGCACGTAACCTGGTTGCT GGTGCACTCGGTATTCGAACTAATGTTTCTAAAgaacaaagacaaaaaga aaaagaaatattgaaagaaGCAAGAGGTGAGTGAGCGATGATGCATTGTG CTTGAGAATAAAAAGTTTCTCAAACTCGACCAGTACCAGAATTATTGATC TGAAATTTGGTATCTCAAACCCGCTACTCCCCCTACTCAATGTGTATAAG TTGTGCaccttttttcaaatcttttagaATTGTATTTAGCACTAGAttta ttcaaattcaaattttttttctgggtAGAAAATTTCTAAACTTAGTAAAC TCAGCCgcagaaaattgacaaaatttaaaTTCCCTAAGGTGACCAAATTT TACCCTGAATATCTTTTCCTCCGACTTAATTCTAGCCCTAATCAATGTTC CCAGATGAGTTAGTTTATTTGACCAGGCTATACATTATGTACATTCCTTT TTCAGAAAAGCGTCGAAAGAAGAAACAAGATCAGAAAGATGTTTGGGAAA ACCCATGATCTCTGAATGATGTTCAAAAGGTAACTATCATCAAATTATCC ATTTGTAGATGAAGGACATGGCTCTTTTTTTAACTAGAGCTGGATCTAAA ATAAGTctaaataaatttcaaacagttcttttttaagtactttaatggga taaactttcgcggggattaaatttcgcggccggggctatccgcgaaattc aaaaatttcggggggacttaattttgcggatggcactattgggtggcaat attttcactattttgtggcttttactgtcaaatcatacatgttggttgtt aaaatacacattattagcgcctctttgatgcaagtaaccattacaaatag tatttatttgacatattttgagttttgtttagaaatatttcgcggatgag gtccttccaaatttctattgggacttaatttcgcgcaTTTTCATACgtga aatccgcgaaatttaatcccagcGAAAGTTTANCAttgagacttaatttc gcgtattttcatccgcgaaatccgcgaaatttaatcccagcgaaagttta tcccattaaagtacaagATACGATTTGCTTTCAATGGCCACTAACAATCT CGGTAATGTTAGTTGAACCCCAAGCTCTTTGCATGACACACCATCAATTC TAGTTATTCCAATTAATGTCCTCTCGTATTGCGTTATCAAGATTTAGGGT TGATCCGTGATAGGTAATTCTGGCTCTTATCTTAAGCTCTGGTATCTATT CCGAGAGTAATAAATAGTAGCTTCGAATCTTAATTTTCATGGTTTTATTT CATAGAAAGCCTTGTGAAAGTCTGCTCGACGATTGACCGGCCGGCTCAAT TGACCACGCAATCTTCACGTGACCGAACGAACGATCAAATCAAACAACAT GGCCAGAAAGTGATGGTGAtcgtttttttgaaaagtatgaCGATTGTTCG AACACTAACACATAAATTCTCTATAAATACTCTATAATTATTTGTGAACA CAATTCATAATGCATATAAAAGCATCAAAAATATCATCTCAATGGCAGTG AAAAGTTATTGTTAATTCTGATTAGCAAATATAATGATGGATTGATGTTA GATTAAAATTTTACAGCTTGTATCAAGCTCCTTTTGCATTTTgttatttg atattttaatcAAGTACTTCATGGATTTCATAATAGCTCCATGTTCAGTT CCAGATCTAAACTTTTTATTCATCGTTATTCAGCGTAACTTCTATTTTTT GATACCATCTCAAATAACTTTACACTTGGAATGACAAGGCgtccaaattt tttaaaaatctttccaGACGAGAgaaattcactttttgaaagaaaaaatt caaaatattttgatcgtTTTAGTGGGTACAACGCCACAAATCTTACTCAA AATTCTACTCTTTCCAACAGTAGCTAGCTGAACGAGCTCTTGATTAACTG TCGAAAACCAATCAGAATTGTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069411TCONS_00069411Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069411-proteinTCONS_00069411-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_5supercontigscaffold_5:74656..84877 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.26 9.14 2.22 1.04 11.2 9.07 13.92 14.08 9.43 7.93 7.48 8.43 4.69 4.57 5.89 5.44 7.52 8.19 4.02 4.3 7.28 7.46 13.05 12.42 8.29 9.72 8.89 6.13 8.47 9.5