XLOC_043308 (gene) - C. hemisphaerica

Overview
NameXLOC_043308
Unique NameXLOC_043308
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_500:90080..96063-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043308 ID=XLOC_043308|Name=XLOC_043308|organism=Clytia hemisphaerica|type=gene|length=5984bp|location=Sequence derived from alignment at scaffold_500:90080..96063- (Clytia hemisphaerica)
CCTTTTCTACAAAAAGACAAAGGAGATGGATGTCCAGTCGTTTATATGTT CATGTTTTCAGCTACGAGATTCCAGTGGGGAGAGTGATTTATCCAGTGGA GTGAGTGATTTATCCAGTGGAGTGAAAAAATGGGCCATTTTTGGGAATAT TTTTCACTGAGGTGACGAGTGGGGTGGATTCCACTGGGTCACAAAGACAG GGGTATTACTTTAATGGGATAAACTTTCGCGGGGATTAAATTTCACGGTT GGACCTATCCATGAAATTCAAAAATTTCGTGGGGACTTAATTTCGCGGGA GGCACTATTTGGTGGCAATATTTTCACGATTTTGTGGCTTTTACTGCCCA CATTATTAGCGCTTCTTTGATGCAAGTAACCATTCAAATAGTATTTATCT GACATATTTTGGGTGTTGTTTAGAAATATTTCGCGGAAGAGGCCCTTCCA AATTTCCATTGGGACTTAATTTCGCGGATTTTCGCGGATGACACCCAAAT CCGCGAAATTTAATCCCCGCGAAAGTTTATCCAATTAACGTAAAAAGCAT CAGCCCATAATTTTAATCTTGACTTAAAAAAGTCAAAAACTACTAAATTT TCATTTTGGGGGGGGGGTGGATAAATGACAACAAATCGAAAATCATATGT CTATTCTCCTTTATTCTTTCAGGATAGTGTTTTGAATTATCTGCAAAAAT GGTAAAATGTAAGTGGTGCAAAGAGGAAGTTGAATCACGTCTTCTCGAGC TACATTACCATCAAATACATTCAGCACTTCCGAAATGTGATGACCCAGCT TGCAGTGGTCGAGTACGGAGGTTTAAAAATTTGAATAGCGTAGAACAACA TAAAGCAGCATTGTCTAGCCATCGTGGTATTTCTTATATTTCTGTTTCTG TCGGTTTCTGTGGTGTTTCTCGGAAAAAGCTGAAGAGTACAAAAGCTGCG AGAAAACATCAAAACGACTCTTCCAAGCATGCGATATGCGATCATGCAGA ATGCCGAAACAAAAACAGAATTTTTAGTAATCGAGCAGCCATGGAGTCAC ATAAAAAAGACAAACATAGGTCATCAAACTTAACAAATCAGAACCGTCTA TCACCACAAAATGTCCAAAAAAGGAAAATGGCGAAAGTTCTTTTGAGTTA CTACGAGAAGGAAGTTTTACCCTCAACTGAAGACAGAAAGAGGTCAAAAA GTCTAGCGAGAGATCACATTCTACAAGAGCTTTTGAAAAACTTATCTGAC CCAGATGATAGAAATTTGTACAAGGGTTCACTGGAAAAAGCTGGCAGCAC TTCAACAAATACCAAAATCAACCTTGCTGACGAGTTCGATTTTGACTTGC ATTTGAATATCAGAAGCTTCTCTTTGGACAGAAAATTTCTTCGTTACAAA TTTACTGCGGTAAGATTTTTATCCCTCGACTTTCTCTGGTTTAAAACTAG TCAATACATATATGATGAGCCCTAGTGAGTTTATACGTCCACTATCTTTG ACGACGGAGGAGGGACCGAAACGATTTGGGATAATTCAAAGCTTTGACCT GTAATATAGATTGGCAAACTATTAATCATTAAAGGGCGGGAATCAAAGGG TATTTGCTAAAATCGGAGCTGTGTAGTAAAGACAGCTTTATAAAAAGCTG GCGGAGAGAGAGAGAGAAGAAAAGATCAACTCCTTCCGTCAAAAGATTTT TCTCCCTACGCTTATTCCTATTCACATCATCTCGCGTGATATTGTTCCAA GCGGATTGACGTGCCAGTCTTATCCAGAATACCTGAATATGTCTCAATGA TTTACTGTCATTCAAAGTCGTTCAGGAACAGAAAAAGTAAAAATATAAAC CATTATTGGCGCAAAAATCATGACTTAAATTCGCCAATATTTGTTTTGTT TGGACTGAGATTCAGATGGGAAAATGAAAGAGATTTGGAAAACATAAAAA CCCATCGACGTTTATAAACTCATGTTTCATTAGTTTGTGTATACATTGAT TCAATACAAAAGGATGATTTGATATTTTCAGGATGACGATACCACAAGCT TGAATGTGCAGAAATCAGTTGTAATGTTGAATGCGAATGCGAAAGAGCCC TTACCAAAAGGATTCATTCAAATCAAATCGGATCAAGCACCCGGTAAATT AAGGGTTGGAGAACATCTTGCTCCGAGACGGATACATGAAGATTTGTACA GAAAATTGAGCAACTTGAAGAAGGACGTTCCCCAAATCAAAGGCTCAGGC AAGTTAAGGCCTGTGCAAAAAATTCAATAAATCGTGACGGTCGTGACGGC CAGTTGTTCCACCCCTTTTGATGGGAAAATTTCTCGTTTTTTTCACTCTT CATATTAATACCTTTCCAAAAAGTCCTGGGCCAAAAATTCTGCCATTTTG GGAAATTTAAGGCAAAACACTTTTTGCTGACGTCAGCAAAAATTTGAAAC ACTAATATCTCCTGGAATATTTATCCAAATGAACTGAAATTTGGTACGAA GGTAGAGTGGATAAATGTCTTTCATTTCCAAAAGAAAATTTTTAAAAAAA TTGATGACGTCAGCAAAAATCAGCAATTTTCGTTTTTCCTAAAGAATTGC TGACGTCATCAATTTTTTGGAAAATGTTCTTTTGAAAATAAAAGATATTT ATGAACTCTACCTTCGTACCAAATTTCAGTTCATTTGGATAAATATTCCA GGAGTTATTAGCAATTTAAATCTTTGCTGACGTCAGCAAAAAGTGTTTTT CCTTAATTTTCCCAAAATGGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNTTGTTGGATTTTTGTGTTGGTTGCCAT GGAAATGACGGATATTTTTGACGTCAAAACTTAAAATGCCAATAATTCCT GGAATTTTTATCGAAATGAGCTCTAATTTTGTACATAGGTAGGGTTCATA AATATCTTTCATTTCCAAAAAATATTCTTCCTAAAAATTGATGACGTCAG CATTTTTTGAGAAAAAAGGAAAATTGCTGGTTTTTGCTGACGTCATCAAT TTTTTGAGAATTTTTTCGGAAACGAGAGATATTTATAAACCCTACCTTCG TACCAAATTTGAGCTCATTTGGATTAATATTCCAGGAGTTATTAGCAGTT TAAATTTTTGCTTACGTCAGCAAAAAGTGTTTTTCCTTAATTTTACCAAA ATGGCTGAAACACAATTTTCGGCCCAGGACTTTTTGAAAAGGCATTAATA TGACGAGTGAGAAAAACCAAAAAATTTTCCCGAAAAGGGGGTGGAATAAC TGGCCGTCACGCATTATTTGATTCGTTAATTTTTTGCACAGGCCTTAACT TGCCCGAGGGTATTTTAAATTTTCCATTTCTGTCATTTCTTAACATTTGG ATTTGGGTCTTTGTTGCTATAAAATAAGATCTAAATATACTATACAGAAT CCATCCCACCAAATATCGAATTTGATTTCACTCCTGGCGAAATATATAGT TTAGTTAGGGTTGAGGGTTTGAATTTCCCAGATCCTAATGGCAGTTGAAA ACACAGCCAATCAAATTCTGTTATTCTTTCACTGGTGATACTTTCTTAGA GAAAACGCAAGTTCCGAAATTTTATTTGTATTTTTGTAAGTGAGGACAGC AATAAATTCGAATTTCCCACTGTAAATTGTTTGAGGCAGATTTGTACCTC ACATCATGTACCCGTCCTGTATATATCAGATTATAAAAATACAGGACGGG TCTCCTGTCTAAAGTGACCTAGAAAAGGAATTGAGAAAACAAATGCTAGA CCAGGTGTTTTCAGAATACACTTTCTTTATATATTGAATTCTACTTTAGA TGTGAGCATCCAAAAAAAGCCTCATGGTCCTGCAATCACATTGACATATC ACAAGCCAGGCGAGCACCACATCGACATCGACCTCTCACCATCTCTATTC ACCAACGACATCGAAGTTCCAGAAAAGGTTTGGAAAAGGAAATTTTTCAA GACAAATCCCAAAGTAACAAGTATGCTCAAAAATGTGCCCATCCTTTTGG TTCCAAAAGAAGAAAATTGCTGGTTGATTTCTTATGAGAAAATCATGAAA GAGCTGTTCAACAGAATTGACGGCGAGGGGACATGCAGGAAAATTTGCCA CATGATTCTTAAGTACGATATTTTGAAGTGGAAATCACAAGATAAAGAGG GATTTGAAGGAATGTCGACAAATCCAATAAAGGTTAGTTTAATTCCCAAA TGTTTAAACAGGTAGAGCTTTTGTCTTTGCTAAGCAAGACAGCATGAGTG AGCCCTGGTCGGTTCCGCGGTAGGACTTGAACGATGGTACTTTACATCTT TTCATCTTAAACCACTTAGTACACTCCTGCCTTAGTGGGTTGCAGCCGTT TGAAAATCCGCCGAGGTAAATATGAAAATAGTAAGGTTTCAAATCTCAAA ATTTCACTGAGGTGAACTATAAAAACCTATGTTTTAATTATAAGTAGGGA CAAAATTTCATCTTGGTAATGTGATTAGGGACCTGTGTGTAGGATAATAA ATGTTTGCCCGGGATGGACAATTTCGCTTAATTTTGATGGCTCATATATA ACACTACTGGGCCTTAAAATTGGATTCTGATTTGTTGAAGGCTCACTGGT GATACATGGATGGGTGTGTTTGGTAATAGTGTGTAAGGGTATTCATGAGT AGTACCCTCCCGTAACTTCGGACAGATATTATTTAAAAATGATGCATCGA GTGGCCTCCAAATGCGATATATTGAATATTTACTTATTTCATTATCTCTC CTTACATTTGCTGAAGCAGCCTCTATAACCCACTCGTTGGCCAACCGTTT AACTACAACTTTTTCATTTACTTCCAGCACCACCTTTTATGGTTCAATGA TCAACATCCAGACGATGAATATTGGTCAACTAGAAATTTAGCAAGATGCT TCAAAGCCATGTTGGAAGATTTGGAGAGTAGAATACGCCAGAGAGAAATC TTAAATTATTTTGACGACAAAACCAATTTATTGGCAGGGAAAGATTCCGA AATGTTGAACCGTTTCGCTGACCGTCTGCATGATCGCAGAGCTGAGGTCC AACGACTTAAGAATTTATGATTATAAAAACTATTCATTCAAACCTGAACC TATGACTAATACTAAACCTGGAGAATCTGATTTACTGTAATCTTTTCACA ACTTAATGTTAGTATAAATGTCTCCTAGATTTTCAAGTTTTTGGCACAGA CTTGTAGTAACTATTATTTTCACGATTTTATTTTTTTTTTCGCACCAAAA TAAAACCACTGTGTCTCACCAGACATGGGTTTTAAAAAATAATGAACCAG GCCTAAATTTTGTACAACTTCTTTTCCACGTTAAGCTTTCAGTTTATCCA CTCCAGATAATTTTCAAGCACGCTGTGATAGCAACCACCGATTTTATCCA ACCCGCACTCAGCAAAAACAAAAGTAAACATTGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069485TCONS_00069485Clytia hemisphaericatranscript
TCONS_00069484TCONS_00069484Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069485-proteinTCONS_00069485-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_500supercontigscaffold_500:90080..96063 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.23 0.16 0.2 0.33 0.51 0.29 1.73 1.34 4.95 13.67 7.35 3.51 5.11 3.54 13.89 10.15 9 11.13 13.86 21.47 3.34 2.78 7.23 7.35 28.72 27.09 76.27 84.23 26.83 17.01