XLOC_043364 (gene) - C. hemisphaerica

Overview
NameXLOC_043364
Unique NameXLOC_043364
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_503:249810..255735-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043364 ID=XLOC_043364|Name=XLOC_043364|organism=Clytia hemisphaerica|type=gene|length=5926bp|location=Sequence derived from alignment at scaffold_503:249810..255735- (Clytia hemisphaerica)
GTAAAGATAAGGTTTGATGTCTGGTCGGTAATTTTTTCAAAATTTTAGCG AGTTTCTCGACATGTGTTATTTTGACGTATTTTGATATTTTTGCCATCTT TTGTTGGCTGTTTTGTTAATGGGATTGGCACCTTTGATGAGGAAATGACG TTACATTTTTATCACCTTATAAATTAATATAATAACTATTAGATTAATTA TCAACGCGAAAATTGATTACCGCGAAATAGTGGAATATCTGAGAAAGTTA ATATAATTTTTTACGCGTTAAAGAGAATACTGGAGATCTTTGTATATTTA TTCCATTTCCGTTATTTATATCACTTCATTAGAATTTTGTCACATCCGGT TATTGACTCCCAATAGGTTACAATTTTATGAAGAATGAAGNCTTGTCATA TCCGGTTATTGACTCCCAATAGGTTACAATTTTATGAAGAAGACAAAGGG AGTAATCAATTTCATTAAAAGAAAATATCGGCTTTTTTCGGAAGTTAATT ATTACTCTAGCAAGTCATGGAGTAAACACATCGTTGTTATATAAGTCGGC TCAATACATACGAGTCGAGACATTATACAGGTCCCTACAGTATGGGGTAT GGAAAGCTGTCAGTTTAGTTTGATAGTATTTGCTTATGTTGAATGCCTCG CTCACGTGAAGGCAAAATTGCTTTTATGGTTGTTCACTTCAAAACTTAAC TGGTTCAACGGCTTGAAATCCAGCGAGGATAATGGGCTTTATGGAAACAG GGATGGTGTTTATATAGGTTCACAAGGTCAACGCGTTAGATTTACAAAGT CAAAATTATTCTTATTGGAGAAATAGTTTTTCAAAGTTTATTTCACTGTA ATATTAATTTTTGAAATACGTCACGCGTCACGTCATACGTCGCGTGCTTT ATCAGAATCGAGATTTACACCCGGGGGGGTACTACCCTTGTCGACCGACG GGGGTGCTCCGCCTAGGTTCGAAAAATGGACCCTACGTGGGACTCGAAAT TTGCGAAAAAAGTGACCCTTAATGGGACTGAAATTCCAAAATTTTCTCAA ATTTTCTACTTTTTTCCCAAACTTTCCAAAAATAGGCACCCTACGAGGGA CTGATTTTTCTATTTTGGTGTTTTTGCGACCCTACCAGGGACTCGCGGAG GTTAAAAAAGGTACCCTGGCCAGCGGAGCATCCCCGTAACCGATTTTGCC CTAGTACCTCCCCCGGGGATTTACATGGTACTTTTACGATTTTAAATTTT TTTGAACAATAAGTTGCTTAACCTTTAAGGATGCGACAGTTGCTAGATAT ATTATTTAAGTATTCTTTTAACAAAGTGACTAAAACAAATATGTACTTTT CGCGTTTATTAATCGCGCGAAAATTGATCGAAAGAAATTTGAATCACCCA GACAAAACATATGAGGGATGTCTGAAAGATAATTAAAAAGAGAGTGAAAA ATGATTTGAAAACAAAATTGAAGTATTCATAGTAAATTGATAAGGTGAAA TCAAGAAAAGCTTGGGTAATTAATTATCATAATTATCTCAATTATATTTT TGAAAAGTCTGCCTTATATTGTCACCTTCTCACTTGGGAAAAGTTGATTA TTAAATTAGCTGGCGTACTGTGTTTTCACCACACGACTAAATGGACAGCT TTTGATGTGTACCGCATAAAATAATAATGAAGGAGAGGAGCATACGTGTG CTTTGTTTCTCTTTACTTTGTCTGAACGGTCATGTCGAAACTGTCAGCTT TTCTCCGGTCAGATTGATGTTAGAATAAATACAGATTTCTTCAAGTGTTC TTTGGAGTGACACTTGAAATCATTCTACTGCGCTTTTCAAGTTTCTCACT ATTTTAATGTTGATTTTTTGAAATCAAAGGGTTATATTTTAACCCCCTTT TTTGTGAAATTTTGGCTTCTGAAGAAGGGACGATTCTGACAATATTTTAC ATTGTGTTACGTCCTTGNGTTATATTTTAACGCCCTTTTTTGTGAAATTT TGGCTTCTGAAGAAGGGACGATTCTGACAATATTTTACATTGTGTTACGT CCTTGTTTGAATTTCTTTATGACATATTTGGCATCTTGAATTCCCTCACA CATCTGTCAGTGGATAATACCTTTCTGGGAAAGAACTTGTCAATTTATGA CTGTTTATAGTAATTTTTTCTTGTTTTTGATAGGAAAAAGATATCCAATA GAAATAATAAATCAACATATTTGAAATACCACATCAACTTGATAGAACCG TCAAAATTATTTAGGATACGTTATTTGAAAACATACGAAGATACTGTACT TATTATAAACAAAATGACTGCAAGCTCATCCACACCACCTTCAACACCTC GGAAAGCTCATAAAGTTGTCTTGATTGGAGATTCACAATGTGGAAAGTCA TCATTATTAAGAAGATACACAAGAAAAAGTTTTGAAGAGGTGAGATTTCA ATATCTAATGTATAGAAACAGAGAGCATCTTGTATATTTCTTAAAAAAGG GGTTTTGGAAAGTTTGGAAGTGATAGAGGAACGCTTGAACATTTTTATTT ACACATTATAATAAAAAACTGTATATAAGAACATAAGACTGTTAAGAAAA GTTGAGAAAAGTTGAGAACATTTTAAAGCTTTTTTGACTCAAGAACACCC GTTTATTTAGGAAAATGGGTAAAAATGGTCAAAAAATATTCTTAAAACAT TTTTAGGCTTAAAACGTATAATCCCTGTATTTTTCATGACATTTTGTGTA AATATCTCACTTATTCAAATGCTGTTTAAAAATGTTTTAAGAGCTGACTA AATTGTTTCGTGTCTTTGAAAATCTTACCAATTACCAGATTTGTAAGATT AGCAATCAAACAATAATCTTGAATTCGACTTTTGGACTTTGAATGTGAAG TTTCACAGGCTGGGTAAATAGGTTTTTAGAATCCACTCGCATTGCCAATT TCTTTGTGTTTGTTAATTTCAAAATATCTCAACTTTCTAAACCCCATTTT CAATGAATCGGAATGTTATTATTGCCACGACATGAAATCGTAAACTTTCT CATCAATCAAAGTACCTTTTCATTCATACAAAGATTTACGAGGTCCCTGA AATAGCATGAGAATCAACTACCTGACCCACAAACGCCTCGCTAAACGGTT CATTAGTACAAACTTTCAGACATGCTAATGTGTTTATTTACGAGTGATTA ATATATCCTTATCTCGTTTGATTTCAGGATTATATGCCGACTGTATTTGA TTCAGGATCCGCAGATATCGTCGCTGACCAGAATAATGATATCCAAGTTA ACATCTGGGATACATCAGGTAAAATNCGTCGCTGACCAGAATAATGATAT CCAAGTCAACATCTGGGATACATCAGGTAAAATGATGCTTTAATTTAACT TCAATTTGCTATAAACATGCTCGATTGACGTTTTCGCTAAACAGACTTTT AATTTCTCAATCTCTGATTGCACTGTCGGTAAATCTAACTCATCATCAAG CCTAATTATTTAAAGATTTTTGGTTTCCTGTTACTCCAATCATTGTTACA CAGTAATTAAGTTTGAGTATCTTCTATTCGTTTCTATGGAGCTTAAGGTC CGTTAAAATATTGATTTCCATGTGATGTTATATTCTACTTTCCGTTGTTA TACAGACTTCCTGATTATGATCCCTTCCTTTCACTTCAGAAGGAAATTTA TAGTAACTGTAGCCCACTCAATGTCAATATTTTAGGTTACTATTATTTCT ATTTCCATGACAATTTTAGGCTCTGGAGAATACGACCATGTCAGACCATT ATCTTTTGGAGAAGCGACTGTCTTCATTGTCTGCTTTGACATCACCAAAT CAACAACTTTAGAAAATATACAAAGAAAAGTAAGGAAGAAAACTAATTAG AATTTCAGATTATATACTTGCTTACTTTTAAATCTTAGTAGTTTTCAATC TATTAAAGCCTAGTTTTACTAAAATACATAACCGTATTTGATATAAACTG GAGAAGGGAAATTTTTGTCCTTCTGAACTTTTGTTTTGATGATTTTTAAT TTGAATAGTTGGTATCATATTTTCAATGTTATTATAAAAGAAAGATCAAT TCAAAAACACTTAAAAGTGTAACAGCGGCCAACCCTTTGTTTCACGTAAT TAAGGCGTTCAAGTGCGGTCAACAACCATTTACGTTCTTTGATCAATTGC GGTCGGAAAATCTTTATGCTATTGCCAAATCTGTTATTGTTTAATGATTT AATAGACATGACAATGAACTCCAAGAACGTTTTTTCTTTCGTACGTATGA TATTGAGTACTCCTAATTTTTACGCAATTGGTCATCCCATATTTGTTATT TATCGTTGCGTCAAATCAAGGTTTTCCGTCTGAAATGTTACATGTTTTGA ACCCTTAGCAAACACCCTTAAAAACTGTTTTTTAACCATAATGTTTTTGT TTTTATTCTCCAGTGGTTGCCAGAGATTCGCCAGCGTCACGCCGACAGAC CCATTATCTTGGTTGGATGCAAAAGTGATCTGAAAGCTGACCAGAAACTT ACAAATATCCACAAACGATTAGTGCTGTCAAGCCAGGTAAATATTTACTA ATATTTCTTTTAACTTTTACACATTGATTCGTATATGTCCAACGGTAGTA GATTACAATCTGGTATTTCAACATTGAATTCGCAGGTTAACAACATTAAT ATTGATATCTGAAAAGAGGTGGTTATACCGTCAATTATACTATACCTTGT CGGTCCTTTTTACACCAACCCATATTACGCCAAAGTTCAGTTTTTCAATT TTTATCCCGGTCCTAATTTTATACTAATCCTTTACGCCAGCGACGAAAAT CTAACGCCAATAAGAATCGGCGTAAAAAGGACATCATGTTGTTAATCCTA AATAAATTTTGTGATTTAAGACAACTCTTTTCTTTTACTTACAGGGTTTG TTACTGGCAAAACATATTGGAGCAATCGCATATTATGAATGTAGCAGTAA AGTAGAAGATACACCTGAAACGATAAACTCTTTATTTGAAACTGCAGCCA TGGCGTCAACTGGAAGTCTTGGTAAAATCTCAAAAGAACATCGAATNCGA AACTGCTGCCATGGCGTCAACTGGAAGTCTTGGTAAAATTTCAAAAGAAC ATCGAATTAAATTTGATAAAAAGAAGAACAAAGCATACGAGAAATGCACC ATTTCGTGAATATGTAGAATATTGGTGAACAAGCTAGTTTGAAGAAGATG AGCTGGAGACAGTAGGAAGAATGATGGTGGTAGCAGCTTCTCGTAACCTT GCGTCGACTCGTCTTTTCTTGTCTGAGCATTATTTTGGTCATTGGTTGCC CATCTGACACACAACGTCGTTTCAACGTTTTTCTGATATTCAAAACGCCC ATATAACGTTAGATGAACGTTGAAACAACGTTGTGTGTCATTGGTTGTCG CTATTTCTACCAGAATCAATAATTTTCAATGGAATTTACCAAACATTACC CAAAGATGACTCAATATACATGTTATGGTGGTAATGAAGAATTTACTAAT TTGAAGCGACTAACAGCTCGAGTTTTACTGATTATGTAGCATTACTCAAA TGTCATTTATGTCATATTTTGACATTATATTGAAATAGAATTCAGATGCC CAATGTGACTTTTATGGGTTCGATGGATTCGGCAAACCAGTTATTTGCAT CAATCTTGGTTGTAAAACTGGTAACTAAAGAGATCAAACCTTTGATAAAA ATATCAGAGTAATTTTGATGCTTTAGAATTAATTTCTTTTTTTAAATAAA GATGCTTTGTAAATATTATATACTAAGCGCAAACTCTTTCGTTTTAGAAA GATCTTTGTAACATGTAATTATCCAAATTATGAAGATATGAATACAGAAT GATCTAACCATGAAATTTTGCTGACT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069649TCONS_00069649Clytia hemisphaericatranscript
TCONS_00069648TCONS_00069648Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069649-proteinTCONS_00069649-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_503supercontigscaffold_503:249810..255735 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.75 11.74 4.49 2.25 415.44 311 163.68 154.18 79.26 89.29 64.06 55.59 77.63 56.68 115.13 100.29 46.04 49.84 19.97 23.83 13.85 13.97 22.19 24.24 18.97 19.86 100.78 86.93 63.63 55.08