XLOC_043397 (gene) - C. hemisphaerica

Overview
NameXLOC_043397
Unique NameXLOC_043397
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_506:337874..343874+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043397 ID=XLOC_043397|Name=XLOC_043397|organism=Clytia hemisphaerica|type=gene|length=6001bp|location=Sequence derived from alignment at scaffold_506:337874..343874+ (Clytia hemisphaerica)
tgagaattttctaGAATATTACAAAATACAAGAACATAATTCAAACGTTG ACAATAATAAGCCATTAGCTCTGGCAAATCTGTGGTAATGAGTTGTGACT GTACAATCATCACCAATTTTGTTGATGGTTATAGTAATAAATCACCACCT GTCGAGAAACTACGTCGTGGTTTTGGTTTCAAGAAGAGATATTATACACT TGGGCTGGTTGATATTTGTATGAGATGCTGTAGAAATTTGGAGAGTCTGG GAAGGAAATTGGTTTTCTCATATTACATAGATGAAACACAACAACAATTA AAAGGTTAGATCTGATTTTAAtgaaatacagttgactctcgctaattcga attcGAACGGAATCTTATTTGCTCGTCTTATCTtaaattcgaattaaaga aagtttctccttgacggggactgggaataagttcgaattTATGAAACgat tcgaataagcgagagtctactgtagtaaaatcaatcattttcaaaaatga cgaaATTTACTAACACTATTGATAAAAGGGGGAAGAACTTTGTTAAAGCC AACGTTCACAACAGGATCAGATTATGTTGGATGTAGCAAAGTCGGTAATA ATACATATACatctttcatttaaaatgcattGGAATATAAATGATTTTTA CACTgacttttattgaaattcaaaatctgAAACTTATTATTAATACACat cttgtttttataagaacaaactatatgagaacataaggcttcgatttcca aaatgttaagaacaagttaagaacattttaaggcttcacggaCTTTAAAA caaccaatttcttaggaagatGGAGAAAAATagtcacaaaatggtcaaaa taagaacatgttaagaacattacttaaaactcaaaaagttaagaacatcc aaaggcttcaaagtttttgaattttcttataaaagaaatataTACATGTA CAGTCATTTTTAGAAACAAATTTCCTACACCTACGCCTTCAGTTCATAAT GGGTTTTGATTTATCATTTTTGATAACAACGTGGGTTAAAGATTAGGTAG CTAGGGATTCGAAACTATACTATAACAGTTAAGAACTGTATCAAAAAGTC AAGTCACGTTTATAACTCAAATCCAAGTCAATaatgaattgaaaatttaa tgtaTTTGTCACAATTTTATTATTACTAAGAGTGGGAACCAATTTAAACT CGAAACAAgatttaattcatgatattcatgacgtaatgttttctacggaa ataccccggttttagccagtagtggcaaatttaagctagacaaaaattgt ataaaatttgccactactggcaaaaaccagggtctttccgtagaaaacat tacgtcatgaatatcatgaattcattTTGAAGAGTGCACAACATACCTTT TGTCTATGATTGTACGAGGTAGAATTGATGTCAAATGTCGTCAGAAGTTG CTGCcttttgattttcttataaacaGAAAATTTTGGCACCATACTCATCC TCGCTAAACTGCTGTCCGATCCCTTTGTGACGTTAAAGGGACGGTACACG ATTTTTCTAATGGGAACACCCAAATTATTTGAAGCCTCTGGATGTTCTaa accttttgagttttaagcctacaaatgtttttaatatgagtatttttttc gatttctttagagtccgcaaaaccttaaactgttcttaacttgttctcaa tattttgacaatcgaagccttatgttctcatatagtttgttcttatataa aaataaaattgtagaGTTAAATGCATTTTTTTTGACTCCTAACAGGTCGA TTCGAGGTTGAAAATAGTAAACTGGAACGAGTATACGAAATCGAAGAATT ACCGAAAAGTTgttttgacagaaaatacattttgaaatGGACGATGAAAA CATATGACCGGGTATTATATTTGATATGGGATGACGAAGGAGAAGGGAAA CAATTGTTGAATGTTTTTAAAGATTACAGAGAGGTAAGTGCATAGACCAT TTCACttaacgacttactattggtctaattttttgaaaaattttgaaacc gtTATcggggcgcaatcagtcctgataacctatgatccatttcgactgtg aaattacctattaaccctttaagtgccaatgtcgggTATATTGGACATGG GCTAtactgtaatgcccagtttgagttagaaatcgtcattcttggtctaa ctcgtaggaattggattgggcttcatggtcaagcaaaaaaaatcaaaagt gagtctttccagcgagattttaagccaaaaagtttaaaaaaatgcaaaaa tttgtggcaaaaatccacttttttgagattttgagcattttctgttaacg agtgatccaagaacatccaaatttggCCCTAATTTACTTGAGTCTGTCCT CTAGtgaattaatttgaaattttactgcTGGGCACCTTTCCTTCGTTCAG TCAGGTCTGCGCAGCCTTTAAAGATTGAGCTAGCGATTTTCTTAAACCCT TTAACTGCCACGGGAAAGAatgaaggttcgacctatttgccaggaCAAGA GCGACCACAGAGCTTACCAACACATTtagctttattttctgaaaaataag ttatatgtgtttactttgagttgaaatatgtataattatgaaaaacatct ttgaaatatattttaattattgAACTGTGTTATTTAATGAAATCTAGTTC AAAATATCAAACTTTCAATATACTTCTGGCAAATACGTAGGCAGAAGATT CACATTATAGCCCTCAGTATAATTCGTTACGGGTATTCCCCATTGAGAAG CCAAACTTGCAATCCAGACAGAATCTAGAATTTCATCTTAAAtctattaa ataaaataaaagagctCGTTTGCATTAACATGCAAAAACAAACTTTCAGC AACAGCTCTCAGAAATAACATTACATCCAAAAATAATCTGGTTATCATTA CCTTGTCATAAAGTTTACTTTATCAAATAAACATTACATTACTTCTCTTC TaagtttctaaactttctttgaTGTTAAAAAGGGAAAGTACACACTTTGA GACCTCTTATAGAggtataaaaattgaaaaataacaaattaaaaGGAGGT TTTGGATTTAAGGGGTTAAAGGTACACCTATTCAGCAGGAGTAGATTTTA TATACGATTGTTTGGAAAAGTACCAACTTGTGGGCCATTATTTTTTAACA AGAGTTCTAATTTTTTGTATTTACaacttatacacccctgtctcgcagcc ccggtggGATATTTTTCCTCAGttgagataaaaatttccatCGAATTTCA ATGGAGATAGCAATTTTATTGTCCAAAGATTAAAAATTCGAGTgagaatg gttttggagtgcaattttttaaacaatgaaTTTCTATCGTGAAAGCACat gtcgaaatcatatatcgacgctgtgccgaccaatccagattctattcagc gcgcaatcaacgcagggaaaagtaaccatgacgaccatccaagatcttgg atgaagttcaaagttgatatttttattcccatcgttgaaaacacaactca taaatgtcatcaatgctttttaaaaagagtcagtgatagagaatcataac ataaagtctgtctattatttcgattcaattaaagtggcatttccataatt aaaactttagtaattactgttatacatttggggatcatgtaaaagatttc ttttgaaagaaactcattttaattacacttggaggtttctgggggattcg taaatagtaaactgcatactgatacagtctgctaatatggtaatatttgc tcttcatctttgattttttctacagggtgtccctaataaaagtatcgagt ttgaacatgcgattgagtagaaagttttaagtgtgtattcacaaaattgt attttaagctcccCctcttttttctttgtcattacgattaatttatacgt tgtaactaccttttgtaatgagcctatgtgatggagaacgttcttatatt ttagcgataacacacacaaacttttttactcaatcgcatgttcaaactcg atacttttattagggacaccctgtacagtacagtgattagattaacacat gcgcgataaaatttatattattggtcttcagaggttgaaatattctcaac ctctgatactcagggtaatgaatttcgagtggggatgaaatctaAGTCAA CTTCCCAGTGAGGCTGagatttcagggtattttcccaccgggaacgaaag ttttgctaaattttccacATGCAGCGGGtcagtgacacaggggtgtaact ATCCCTTATCGAGGATAATATAAAGCTGTTTCAGAGAATCTTACGTCAAA TGAAACTTTTTAAATCAACACCAATAATGATCATCCCTAAGGACGTGACC AGGTTTTATTAAATCCAGTGAAAACCCAGCTCTTTAAAatctttcacttt ttcacaatAATTTTAGAATCGAAGAAGAAGTCGAAGCAGACAATCAAGTG ATACGTCAGAGGCTTCAAGTCACGGTGGAAGTTCAAGACACAGCTCAAAT GGTTCAAGATAAAAAATATCACAATTTGATTTTACTGAAAGGTAGAGAGA GTACCTTCAAAAATTTCTATTCGNAATAtcacattttgattttaaccGAA AGGTAGAGAGAGTAACTTAAAAAAATTGCTATTCGTGgtatttatgacgt aatgtctGATTTGAAAGCACCCAAACAGTCGGGTCGTTTGCatctaattt tgaatttgaacaaTAAAACTATTGGCAAACATTACGTATGAATAGCATGG CTTTCTTGGTAAACACTGGTAAGCAACATTATCCACAAATTtatgtttaa ccctttaagtgccacggtcctttttttctagttttttttaaagaaaatcg ctagttccaactttaaaggcttatatctccggatctagaaggagttagaa gctcgttcatAGTTTGTTGGATAGCttagtctcttctttctttcaaactc aaaactcaaactgggcattacaggagggcttcgccatcttatatagccca tgtctgatatacaAGACATTGGCatttaaagggttaaagaaaatttcGCA CGAAAAGAGGACAGCAACACATTCACGACATAAAAATTACAattattttg ctattttatactcagtttttgagcatttttatcgcttaaaataaaattct aaaattcgtGAAAGTTGTATCCGCTGAATTCGTTCCAAAagtaaaattcg cgaaatttcgcgattttgcagcttcgtgaaagtttctgctcttAAAGTAT ACGGAATTTTATTTGTATGAatctttttctgttttgtttttcgggTACAC TGTATACCACACCCAGCTGGACTCCTAAATTAGGAGGAAGGTCTCTCCAT ATTAGTTTctatttttaagagttttataAGTAAAGAACATTATTTATATA AATTGCTCACTGGTTTAGTATAAtataccttttcgaccgtagtcgcacgg tcgggcgcgtgccacttatttatttaattatccccctaaactcgatccaa gcCTGCGCGACAATTGGCGAAAAGGTGTATACAGTAATTCTTGTAGAGaa tgatgtttaaaaaaaggaaaaaaatgaattttatattCTTTATATCATTC CACGGTTTGTAAATAACGTAAATATCAATATTTATTGACTATGTATTCAC TTTTATATTAAAATTTTCTACGTCCTTTTAAAAAGAATTGTGAAGTTTGG AGATTCTCTAGCTTCTCTAGCTAGTAGAAAGTTGGTAGATAGTGTGACCT GACTAACAGAATAATAGACTCGAGAAAGTATGTGAGTGCAATATCGAAAA TACTTCGATTGAATTAGCTAGGGGGGGCTTTTATTCATAACATTTTGTGA TTCTATGAAACCGAAACTACATTTCAATCTTCAAAAGTTTCCccttaaag attttgtttttagataagagtgatatcgtttgcttgctcgtcaatttttt a
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069693TCONS_00069693Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069693-proteinTCONS_00069693-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_506supercontigscaffold_506:337874..343874 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02 0.02 0.02 0.09 0.16 0.1 0.45 0.89 1.28 1.51 1.38 0.66 51.85 22.73 0.51 1.55 1.22 1.2 21.94 35.01 6.47 6.32 6.24 9.58 22.97 17.44 7.95 10.09 3.92 2.06