XLOC_043476 (gene) - C. hemisphaerica

Overview
NameXLOC_043476
Unique NameXLOC_043476
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_509:73559..83590-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043476 ID=XLOC_043476|Name=XLOC_043476|organism=Clytia hemisphaerica|type=gene|length=10032bp|location=Sequence derived from alignment at scaffold_509:73559..83590- (Clytia hemisphaerica)
TTTTAGTGCAACTAAATAATAATAAGTATCGAATAATCTGTCAAAAGCTC ATCACACACATCAAAATAATTTATACACTGAACACTCAATTACCAAAAAT TAATTATATTAACCACCAACCAACTATCATACACCGAATTTTTATATCTT GTATCAACAAAGACACTAAAATGGTAAGACTCATAAAGATGTCCTTTACA CGTTTTTTTTATAAGAACATCCAAAATTTTTAAGCCTTCGGATGTTCTTA ACTTTTTCAGTTTTAAGCCTAAAAATGTTATTAACATGTTCTTATTTTTA CCATTTTGTGACCATTTTTACCCATTTTCCTAAGAAATCGGGTGTTTTCG AGTCCGCAAAGCCTTAAAATGTTCTTAACTTGTTCTTAACATTATTGCCA TAGAAGCCTTATGTTCTTATATAGTTTGTTCTTACAAAAAACGTATATTA CTGTGATAGAAGGAAGGCGCGTCTCTTATGCCGACAAAGCAGAATAAACA AAAGCATTTCTCAAAATTTGCGATTTCACGGCACCGAAAAGGGGGAAAGA CGTTTCTTATTATGTTTAAAAAGTGCTGTGTCAGCATAATAGGAGATACG TTAAATACAATAAGTCTTTTACATGAAATGTATTTTTGTTTTATTTTTTT TGTTTTTAGACCAGTTACACAGAAAAAGGAGAAAAGGTACTGTAACCATT TCTATAGATCAGAGAATACACCTCAAAATCTATCGTCCTTGTTTTGATGG TTTTATCTGAAGATTCTACAATACACCCCTGTTTCATTGATCCTGTGAAG ATTACTCGATAGACGATGGAAATCAATCTTTCTCTCCTATGAACAATTCT GAATTCTAGAAAAACCCATGTGTCTTTACTAAGAGAATCACAATGTATTT ACTGTATTTCATTCTCATCAATGTCAAATTTTTTTTGTGACGTATTGTTT TGAGAAGCCGCCCCTCTGTCCTCTGAGATGGGAATCTCATATCAGCCAAC ACCAGGGCATTCTCTGGCATCAATCAGTAATGTAAATTAAGCCTGGGATA CACGAGTATGGCGTTGGAGCCTTTTCTACATATAAATGTACTTTGGCTTG GCTGGTTAAATATATACCTTTCTTTCATCTTTTCCAGCCAGAAGTTGGCA AATTCGTTGCATTCGATCATATTCGATTTTATGTTGGAAATGCAAAGCAG GTAGAGCGACATTCTTCATTTTCCTTTTAATCCTGATTTTACTTTTTATT TTTTAGAGATTCTACCCCATTGGGTTTGAAGCCCGAAGGGCTGGAGTAGA ATCTCTAACCTTTCGCAGACAAGAACAAGTGAAGCTACCTATTTTTCATC CAGAACGTGTCTAGAACGCGCCGCAATCATGACAACGGATTGTATCTAGC GACTCCTCTGTTTCTGAGAACTGCATTTTTTGAAATCTAGCGATAGATCG TACTTTTAATCCGGCGTTCTGTAAAAACCACGCGGGGGCGTTCTAGATGG GAAATAAGTGGTTTCATTTCCCATCCAGGAGTCTCGAGTCTAGCCTTTCG GGCTTGAAAGTCAATGTCCTACCCATAGCCTGTTAGACGAAAACTGTTTT AACAAATAAAAAGTTTGGTTTGTTGGAAGGTACTAGCTAACCCATACCAA CTAGTCATATTTTGAATTTTAAAACAAGAGCTTCTTTCAGAATTTGAAAA GACTTTAAGAAAACGCTAAACATAAACACAACATTTTTGATATCATTATG ACTTGTCTTGTCAAAACCCATGTTTTCTTTGTAGGCTGCATCTTTCTATT GCACGAGATTTGGGTTCGAGCCATATTGTTATCGTGGTTTGGAGACTGGA TCGAGAGATGTTGCGTCACATGTCATTAAGCAAAACGACGTAAGTGTCCG TTATTTCTGACAAAATGAAATCCAAAATTAAACGAGACTTGATTTATATT AAAATGTTTGGATTCCGAGTCGAGTCCAATGGACTGAAGTCGTTATAAAT GATTCGTGTAATACAACAATATTAGTGTTATTATGATATTACGATAATTG TTACGGGATAGTATTAGTTTGTATAAACCCATTCCATCATACTTTCGCGA GCAGAAACTTCTGCGAGATCGAAAAATCTCGAAATTTACAACATTTACTT TCGCGAATTCGAGGAAAAAAGGTTTTTCGCGAGCATATAAACTTTCGCGA AATTCCCTGCTGAGAATTTTCAAAGACATTAACTTTTGCGAAAAAGGCCA AAATTCGAGAAAATCGCCAAAGTTTCTGCTCGCGAAAGTTTGTACGTCTA GAGTAGTCGACGTATTTTATGGTTGAATAAGTCACCCAGCATACTAGACA ACAAGTTTTCAAAACAGATTGTACCTGAGAGTCCGGTTCTCTCTGAGAAC TCCTTTTTCACTGCTGTAAAATGCTCCCTTGTAACACAATATTTCAATTT CTGTTTTGTAGATTATCTTTGTTTTTGAATCACCTTACAACCCTGAAGGA CCCGTCACAGAAGGTTTGTCCCTTTACATGTTTTTTATAAGAACAAACTA CTATAAAAACGTAAGAATTTGATGGACAAAATACTAGGAAAAAGTAAAGA ACACGTTCAGGATTTGCAAGCTCTAAAACACCTCATTTATTAGGAAATTG CACAAAAATTCCAGCTTGGCAGCTCGCATCTGTCAGTGCCGTGAATCCTA CTCCTTTGTGGGTAGGACCCTTCCCAAATGCATTCGGAGGGCTCATATCT CATATATATAGCTTTTTTTCATTTATATTTTTGCAGAACTTGGCAAACAC CAAATGAAACACGGAGATGGAGTCAAAGATATTGCTTTCCAAGTTGAAGA CTGTGTCAAATTATATCACGTAAGGATGATTTCTGTTTTTTATTTCTTAT TTCTCTGAACCTGACTTGCATACATCCCGTATGATGGCTAAACTTTCCTA TTCCCGAGGAAACATTCCTGGTGCATTTCCAGGATATTTTCACTGTCTTT TCCGGGCATACCGGCAAATGAATCTTTCTGACGCGTACGGTTGCGCTGAC AATACTTTACGGCCTAAATACTGACCGCCTAACAAATTAAAGTTACTTTT CCACCTACCTAGAGTCTCAACCTGCTTCCGTTGTAAAATAGCAATATGAA AGTTTATCCGGCAATGACAAGTTTAACTATTGTATGGTATCGCAATCATT GTATTGCGAGGGCTTATTCCTTACGATTCCTGCATTTTCTAAAATTGGAC AAAAGGCTAGTTTCTCTTTGTTTTTTTGCGACGATTAACGACTTATGGTT AAAAGAAAGATGAATTACGCATGCGTGTTATTAATACAGTAACGGTCAGT TGCACTCTCTCTGGATTTACTTATATAGTTGTGCTAAACTTAACAAAGCT ACTTTGAAGAATTCCTTCGTTAGTCTTTCGTTATTTGTCTTTTAGCGTCA CTCATCGGATCCTTGGTACACCGATCAGTAAGAAATAAGTATCAGCTAAG ACTGAATGCCAGTCATTTTACTACTTTAAGGGCGGAAACTTTCGCGTTTT TCGCGTTTTTCGCGATTTTGATTCTTTTTTGCAAAAGTTTTTGCCAGGTG AGAAATTAAAACTGAAAAACCCGAAAGTTTTTTTTCGCGAAAAATAAACC TTCCTACTCAGTTTTGCACTGTTTGCTAAATTTTTGCATGTTTTATGAAT TTTTGTTACCGAAAAAGGTAAATTTTATATGAATTCGCGAAAGTTCTATC TATGAAATTTCGGCTAAAACCATAATTCGCGAAACTTAAATTCGCTAAAT TTCGCGACTTTTTGACTTCGCGAAACTTTCTGATCGCGAAAGTTTTTACC CTTTAAAGTATTACGATGCGTAATACTTTCGTTTCTATATTATAAACTTC TCATCCTATTTCATTTCTCAGAAATCGATTGAACGAGGAGGTTCGAGCGT CCGTGAACCCTGGGAAGAAAAAGATGAAAATGGAACAGTGATCTTCGCTC AGGTCAAAACTGTAAGTCTCTTAACCTCTCTTAATACTGTTGTGAAATTT CCTCCTGTTAATATATTATATTTAAAGAAAATTAGAAAAGTCTCATTCTG ACACATTCCTATTCTTGAAACATAGGAGAGTCTTGTCTTGTAGCCTCGTC TTGTCTTGTAGCCTCATAATAGCCTGATAATAGATGGCCATTAACTTCTT ACGTGTACGGTAAAGCCTTGGAAGCCGTTTGAAAATAACCATCTGAGAAC AATAGACAATTACAACAAAAATCTTGCGTGCCGCGATGGAAAAACTGAAA AAGAACCTTTTCTGATACAGCGCCCTATTTTTAAACACAGCCACGCAACT TTGTTATCATTGCTCGAACTTTGTAACGATACGCGGTCCTTGCAATTTCA TCAGATCATCTGTTTACACACATCCCTTTAGAGTGTCAGCGTGGTGTGCA GAGAACAATGAAGGTCTGATCTCAGGTTACATCTTTGTTGATCCAGTAAT TTATTTGATTGTGAAGGGTCTCCTGATCAGTATGAAAAGTACTTTGGGAT CGTTCTTTCAGATACTATATCCCTATCCCTTTCTTTCATTTTAGTACGGT GACACCATCCACACGTTTGTCGAACGTAAAGACTACAAAGGACTCTTCCT CCCTGGATTCGAACTCGTCACTAAGAAAGACCCTCTACTTGAAAAATTGT AAGTCGCTTCTTAATTCAAATTTTAAGTTCCGTGTAGATATATTACAGTT GACCTTATTCGATGAAAATCCAGTTCCCTTGAAAATCGAATTAGAGAGCA TCAACCGTTGTAACCGTGCAGCAGCCTTTTTTAAATGTCGCATTCTTAAT AGACTAGAAAACGTCTGCCTTTCCTCTGAGCGTAAACTACAGCGAAATAT AAAGACGTGATTACTAAAGTCTATTCACGATAAGTGTGCACTCTTTTTTC ATTTACCTATAACTTTTGAAGGAATTCTTCAATCTTTATAAATTTGGTAT CGTTGGAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNGAACAATTTGAAATAAAAAAATCTTCAAAA GAATTCTAAAAATGAAGATGAAAATGAAGAAGAAAAAAATGAAGATCTTG TAGAAAAGTGCTATAACTTTTATTTTCACTGTAGAGATTCTTTGATCTTT GGAGGTCATCACTGTGAAGAAATTTCACTAAAATATTTATTCAATACAAA GTTATGATACAAAGTTGATAAGTGATTGACCCCAAAAANNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATAACTTTGTTTGATATC TTTTGACTGAATGAATATTTTTGAGAAATTTTTTCACAGTGATAACGTTC GATAATCAAGGTTTCACTTCAGTGAAAATGATAGTAATAAAGCGCTTTTC TACAAGATCTTCATTTTTTCTTCTTCATTTTCATCTTCATTTTTAGAATT ATTTTAAAGATTTTTTTATTTCAAATTGTTCCACTCACTAATATCTTTTC AATGATACCAAATTTATAAAGATTGAAGAATTCCTTCAAAAGTTATAGGT AAATGAAAAAAGAGTGCACACTTATCGTGAATAGACTTTAGTCTACATTT TAAGGGACCGTGTACAAATATTGTTTTAATCGTTTGAGAAAAAATCGTAT AGTGAAAAGGTATGAAACGATTTAGTAGCCAAAAATTTGAAGAAAAATCG TTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNAATTTGAAGAAAAATCGTTTTCTAA ACGATGACTGACAAACTATGAAAAGGAATTCGTTTTCATTCGTTTTAAAT TTTGAAAATCGTTTACAACCGTCTTAAATATCCAGATTTCGTTTTGGTGT TCTCCAAATCGTTTTGGTGTTCTCCAAATCGTTTTAGGTTTATATAGATC GTTCTTTTAAATAGAAAAACGTTCCATCCAAAGGCAAAACGTTTCAATAA AATGAAATCGTTTTTGCTCGATTAAAATTCATCAAAAATCAGTTCGTGTA CCAGACATAATCGTTTAATAGTTTAGATATTCGTTTAATATTTCAGATAT TCGTTTAACAGGTTAGATATTCGTTTACTAGTTTAGAAATTCGTTTTAGA GGTAAGAAATTCGTTTTGATAGTTGCAAATTCGTTTTGATAGTTTCAAAT TCGTTTAATTGATTAGGAAATCGTTTGAACTTGAAGACTTTGTTTTCAAA TCGTTTTACCACTTTTTGTTCAAAGAAAAACGTTTAAAATCGTTTCATAA CGTTTCAGCCTGACATCGTTTTAAATTGGTACGATTCTTAAACGATTAAA ATCATTTGGGAAACGAAAGAAATCGTGTAAATTCGTTGAAAAGTGAAACA ATATTTGTACACGGTCCCTAAAGGATTGTCCAGCTTAGACAAGTAATTTG TTCACCTGATTTCAGAATTTCACAAGATTTTTTAAAGCGTATTTTGAGAA TATGTAGCTCCTTACTGTCGTATATTGTAGTTGAACATCATTTAAGAGAG AGCTCGATAACTGTTTAGGGCAGATTCATAAATTTTAGATTAAAAAAAAA GTCTCTTAGCTTCTTATTCTCACTTTCTCACTCAAATCCTACTATGGGGG GGGATCCTACTATGGGGGGGGGGGGTTTGTAGGGGTTCGAAATACCGTTT TCCCGTCAAAATTTTTCCTGATTCCTGGAATCCCGAAAATTGAAAAAAAT AATAACACCGTCACACCGGTTTGTACAGGTTCAAATACCGGCAAAATGAC AAAAAATAACGCCAAATACCGTCACCGTCTGATTTTAAAATACCGTTTTC CCGTCTTTCTTTTCGTCAAATCCCGTAATACCGTACTAAAAAAGGGCCAA TCCCGTCACACCGTAAAAGTACAAACCCCTACTATGGGCTCACATGTCTT TCCTTTCTACAGTCAACCCTGGGTTTACAAGTTTATTTTTCTTTCCAGGC CTACCATTGGTTTACAATTTGTGGACCACGTGGTAGGTAACCAACCAGAT CTCGAGATGACACCCGTGGCCGAATCATACGAGAAGAACTTGATGTTTCA TCGCTTTTGGAGCGTGGATGACTCACAAATTCATACTGAATACAGCGCAT TGAGGTCGATTGTTGTGACAAATTATGAGGAGACCATTAAAATGCCCATC AATGAACCAGCTCCTGGTAAAAAGAAATCACAAATCCAGGTCAGTTGAAA ATCATAGAATGTCTGTGTCAGAATGACTCAACCGGGTGGAAGAGGATTAA TTTTCAGAATTAGCGGAGACTTTGACGTATCAATAAAGTGATCTTATTAA GATTTGCGCCGCACTTGGGACAACGGATTGAATTTAGCGCTTTTTGTCTC GTGTGGCATATTGCTCGAAATCTTTACTTTCAATACGGCGTTTTTCTGAA ACTACACAGGTCGCGCGTTCTTGATGGGAAATGGGTGACTTCACTTTCCA TCAAGGAAACTTCTCTAGCATAGCTTTTGTAGCTTGTTTAAACTCGATGT TCCGTCCTCTTTACCTAACGATAATGTTCTGAAAAGATGTGAGCGTGAAG TCTAAAATGTTCTTAACTTGTTCTTAATATTTAGGTCATCGAATACCTTA TGTTCCAATATAGTTTGTTCTTATAGAAAACGTGTATTATTATATATCGT TACCTTGATTTTTTTGTTCATAGGAATATGTCGATTATTACGGAGGTGCT GGTGTTCAACATATCGCACTCAACACTAATGATATCATCTCTGCCGTAAG TTCAAAAGATGTTATTATGTCAGGAGAAACTCTCACTAATCATTCCCCTA TAGGAATTACTTAAAGAGGTAATCAGATGGTTAGAGTTCTTTTGCTTGTA AATTCTTTCCATGGTCATGAGCGAAACTTCCAAATCTTTTTTACTTAACT CAATTTTGCAAAGTGAAGATATTCAATTTCAATGTTTTTGACTTTTAGCA CGAAAACAATAGAATTCTAATATAAGAATCGTTAAGAACCCATTTTTAGA AATTACAAATCGCCATTTTTCGATATTGCAAAAATAGAAGATCTGGAGAT ATTGCTCAGGAATCTACATGCGAAAGATCTCAAACCATATGAATATTTCT TGAAATTACAAATTTTTTATCAGGAAAGAATGACTCACATTTATCAGTGT CAGAGTTTCTTTACTACGGAAGTCCTGAGCGGCCACAACGACAACAATTT TACACAACAATATTTCAAACTATCGACAATAATATCAAATCTCACAACAA TATCAATATTCTCACAACACATTCCCCCATTGTTGTTCACGTCTTGTTAA TGATGAAAAATGTTCCGTGAGGACAGGGCCTTAAGTTACTACACATTAGT CGTACACTTTGTCGTTGTGGCCGCTCAGGGCTTCCGTACTTTACATCTTT CTAACAACTTTGAAAGACGTTTGGTATGGAATTTTAATTTTACAACTTCA CCCCTTTTTCTGTTTCAAAAACATTCTTTTCCCCCTCACCCCTCCACAGA TCACAAACATGAAAGAACGAGGTATGGAATTCCTCAACATTCCAGACACT TACTACGAAGCACTCCGTGAACGCCTCAAACACTCCAAAGTCAAAGTCAC TGAACCATTAGACGTTCTACAGAAGTTGAAAATCCTTATCGATTATGATG AAAATGGTTACCTGTTGCAGATCTTCTCCAAGCCGTGTCAAGACCGCCCA ACCTTGTTTTTAGAAACTATTCAACGCCATAATCATTCTGTAAGATATCA CTTTTCTTATCAATGAGATTTCTTATCAAAAGCGAGCTTTCATATTGGCA CTTTTGAGGACGGGGGTGACTGAAGCAATTTGGGATAACCCACAGTTTTG ACCCGCCAAATCGAAGGACGGTAAAGGTGCTTGTTTACTGTCACGGATTG ATAACAGATTATAAACTTCCTTGCACCCCATCTCACAACCCCTTTTAAAC TTTTTTCCCACAGTGGAGATAGAAATTTCTATTGAAAACCCAATGGTGAA AGAAATTGTATTATTCCAAGCTCAAACAATCCTGTGGAGATGGTTTTGGA GTGTTATTTTTTCACTTGCCTTTCAAACGGGAATAAAATCAAAGTCAATT TCCCAGTGTTGCTTAACTTGTAGGTAGGGTATTTTTCCTACCGGGGATGA AATTTTGGCCAAATTTTCCAATGGGACGAGGGTCTCACCGTGTCTGTGAC ACGGGGGTGTTATGTTATATTAATGATCCATTAAAATCCGTGTACAACTA ATTGACCTGAAGTCAAAATGGCTGTGCTCGATAGTTTGGGATAATTTAAT GATCCGAGGTATATCGCTACTTTCCCTATCTGAAGAGGTATCTGGTTCAT TTAACCAATTTACTGTTTCCGTTTACACCTTAGGGATTCGGTGCCGGCAA TTTCAAGGCTCTATTCGAATCTATTGAAGCCGACCAAAGTGACCGAGGTA ATCTCTAATAAAGAGTTTGACTAATGAAGACGAAAGTGATCAAGGCAATT TTTTAGAAATTGGACTAAGCAAGTCAAATTCTCAAAAATGAAAGGAAAGA AGAACTCTACCAAGTACCTTTTTATTTATATTTCTTATTTTCTATTTAAA GGCTAGATTACACTTAACGGAATATTCAACATTTTTGGAATTTTCCCAAA GTGTTTTGTAAAGCCTAGATTTTTTTTTTTTTTTAACTTTTTATTACAAT ACTTGTAGCGAAATAGGAAGACTAAATAAGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069822TCONS_00069822Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069822-proteinTCONS_00069822-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_509supercontigscaffold_509:73559..83590 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
HPD4-hydroxyphenylpyruvate dioxygenase isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
90.48 89.58 73.66 67.46 168.97 126.83 215.49 227.82 45.21 107.31 65.16 55.5 48.31 72.49 50.29 35.13 89.5 82.19 58.39 52.81 73.22 74.57 85.89 94.74 65.3 60.43 301.26 376.72 17.05 20.23