XLOC_043477 (gene) - C. hemisphaerica

Overview
NameXLOC_043477
Unique NameXLOC_043477
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_509:87080..93905-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043477 ID=XLOC_043477|Name=XLOC_043477|organism=Clytia hemisphaerica|type=gene|length=6826bp|location=Sequence derived from alignment at scaffold_509:87080..93905- (Clytia hemisphaerica)
TTTCACACCAACTCTCAATGTGGATAAAATCTTAAGGCTTCACTTTTTCT TGCTTCAGAAAAATTGAAGATTAACCTCTTCAGGGCTTTAAACTCAAATG ATTTTAACTCGTTTTCCGCGTGTACTTTTAACAAGCTAAAGACTCCAACC ATCATAATTCGTTTTTATTGCCTCTCTAATCATGACCAATCCATCACCGT TTTGAATTTCCTCGCTTATTTTGAGAGCTCTAAGGTTGACATTGTTTTCT TCTTTCGTTCCGCAGGAAGATAGACCTTGATTATGAAGTGCATTGTCACC CAGAAACCAACACTCAACTAACACCGGTCGTCATTTCACATGCATTGTAT GGCTGCAAAAGTGATTGGTCTTCTATTGGTAAAGAACTCAACTACATCAC TAAAAGAAAGGTAAATTCCAGTCCCCTAAGAGTGTACCTTAAGGATTAAT TTTCGCGTGGAATTTCGAGAATCTAAAAGTTTCGCGTGGATTAAAGCTCT CTTTCATCTAATTGTTTCACTTTATTAAGGTTTTTGGCCGAAATTCTGAT TTTAAAATTTTCGCGAGGACTAAGTTTCGCAAAAATTACCAAAATTCGCG AAAATCGCGAAAATTAATCCAAACCAAATTTAATCCACTTAAGGTACCCG AAAGTCTCGACACCGTGTCATAGAGTGATAAAAAAATCGCGTGTTGAGAT AAGGATAGGCTTGGAAATAATGGGCTTCTATTCACGGTATGCGTCATTAC AATTACAATGTCTTCTGACATTACATCACGGATCCGATTACATCACAGAT GATTGGTTGTAAGAGACGTAAAATCAGTCAATACGTCATTTTCAACCAAC CAGTTGTTGGTTCCGTGGAAGACATTGCACAATGATACATATCATGAATA GTATTTTGTGTATTTCAGATATACTGTACGGTGGGTGACAGACTTTTTAA TATTTAATATTTTTGCTTTAAAGTTTTTAAATCTCAAGTAACCGTCCTGG AAAATGAAGACTGGCCTAAAACAGTACTGTAAAATAAAAACTGTAATGAG GCTAAGTAGGAATTTTAGTAGGGGAATTGCTGGTTTCGGGTTGGGGAGTT GCCAGTTTTGAGTTTGGGGAGTGACTAGTTTCGAGCTACCGGAAAGAAAA GCATGTTTTTTTTAAAAGCACTGACCTTTATAAAAAAACTTGAACTCTGG ACCCTGAACTTTGGTTGGCTAGAATCGAAGAACTACCTCCAAGGCTTTTA TCTTGACGAAGTTAACGTCCGTTACAGGGAGGTAAACGTGAGAAGATATC GATGCACAGAGTTTACTGCCGGAGTTTCGAAGACCTCTAATTCTAATTCC TTTAGAAAGCAAAACCCGTTCACGAATTTTCTCACTTCTTTAAGATTATT CTTTTTAAGCAGTGACAATTCTTGGACTATACATCATTATACCTAGTGGT ATACCCCAGGTATACAACCATGGACAAAGGGATTTCCCTGTGAAATCACA AATGATTTTTAAGCGCGTTAAACTTCAGTTGGGAAGTAGAGTTTTAACTC TGAGTTTAAACATGAGACTTAAGACTTACGACCTTAGGATCTTAAGATTT AAAAGCTCAAATTTGCTCCAATAAGGTTTGGAATATAGCCTAGAAGCCAC TGGACCCCTCCAAAATCGAAATATTCAATGATAGAAAGCGGAAGGGCTAA AATTGCAATTTTCGCCCGAAGTTTAAATTTGAAAAATGTTAAAATACGCT AAAATCTCAATATCTTTCGACCATGATTGTATCTAGTGGTATACTCACTG ACTTTTATATACCCTGGACCAAGCTTCTCAATCCCAGCCAAGGAAAATCT TTGATCGGAGTTTTTTGAAAATTGGTACCCTACTGGCGGTACTACTCGAT AGCGGTGTAAATGCATCGAGAGCGCTAGGTCTACTTTTCCTCGAATTCTT TTGATGATGTAGCGGCGTTAGACGTTAATTTTTAACNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNGATATTGCTTGGTCCAGGGTTATATAAAGGT CAGTGGGTATACTCCATTAGTATTACCCAAGATGTGAAAAAGAGATAATT TTCCGAATTCTTACCATCACCCTCAGGTGGTATGTTACGACGCTGTGAAC CATGGTTGTAGCAGTAGTCATGAAGATATGGCTTATAAAGACATGGCGCT AGATCTGGTCATCTTGTTGGAGAAACTTAACCTTCCAACTGTTAGTTGTA TTGGTAAGTTGTTGTATTGGTAGTGTTTTGTGGAAGATTGGACCATTCCA TTTTGTATCCATAGAGGGGGTGGGCGCACATTTCCAAAGGGTAATCGGAG AAGAATTTTCCAGGGGGTTCTAAACGAGTATTTTAGGTAAAGGTTTAATC TAAAATTTCCAGGGGTAAAAGACTCATTTTAATTCGTCCACCCTGACTTT TAAGGTATGAAAATAATTTTTGCAAGGCTTCTTTTGCAAATTTTGCCATC GTCCAGGGGGTATCCACACATTTCTAAGAATCTGTTTTTGCCTTGAAAAT GTTCGTCCACCCCCTGTATGGAAATTTGATTTTTGTCCATGACAAATCCT TCCCCTTTACTAATAGGTTTTGTCCTAATCAATCCTAATTGTAGACATCC TTGACTAAAAGTCTAATGACCGATGAAACCCTCTTTTGTTGTAAAACCCC TCTTTTGTTATATGCTTTGACACAATTCTAGGTTTTTGTATTCCTGAGAG TTCAGGTAACGCTGTTTTGTCACTTTGTGCCTCAAATTGTTCTTATCCTG TTCTTATTTACAGGAAGTAACTAAGGTATTTTAGGCATTATACCCAATTT GTTTAATACTTTGACCCCTTGAATTGCTTGAAATTGAGTAATTTCAGACT CAGCATTGTTCTTAAATTGGTCTTATTTTTTGGTGATTTTGAGCCTCATT GTTCTTATAAAATTGTTCTTATAACTATATCACCTATCTTGTTGATTCTT CGTAGGCCATCGTATGGGCGGTAAAACTTTAATGACACTAGCCTTGACGC AACCAGAACGTTTTGAACAAGTGGCCATTATCGACATCGCGCCTAGTGCT GAAGTCCTGATTGAGAATACAACCAAGGATTTGGAGAAGCTGGCGAACCT TCAGTTGTACAAATTCCAATGTAAAGAAGATTTGGAGGCTTATTTGAAAG AGCAACAACTTGTAAGGCTTTCTTTGTATACACCCAAATCTAGTTAATAG CGAGTTTATGTATTTGCTCTTTTGAGGATGGTAGAGTGATTGAAACAATT TGGAATAACCTGCACTTCTGACCCGCAAAATCGAGGACGGTAAAACTGCT GATTTACCGTCGTTCTCAGTCGGTTAGGATGTAGACAATTAGAACCTTAC CGTCTCCGTCACAGAAAAACACAGATACATAAACTCGGTAATATCTATCC AATGCCCTCCCAAGATGTTTCCTATAGGAAAGAAATAAGAAGATGCTCGA AGGTTTAAGCCTTATTTTAAGTTCATTCCTTATTAAACCTCGGAATAGGT TGCACTAAATTCTGTCTCCAATTGACGGAAATAAATGAACGCTAACTACC AAAATAGCAAAAAAAGGTTATGTTTACTTTAATTTTTTACACTGTTGTAT TCAAATTTCGATTCTTTTGTTCATGGGGATGATGCATAGAGAATCACGTG TGCTTAAAACGTACAAGATCCCTGTTCTAGGCTGGACTAAGTCATTTAGA CGCCTCTGCAGTGGAACCAACCGCTCGAGTTTTCGCTCTTAATTTTTGTC CAAATTTGTGTAGATTGTCGGTTCATCTGCATTTACGGTTTCCAATCGCT CTGGTATGTGTTACGGATAGGAAGTGTTCATACTCACTTTGGAATGTTTC GGAGCAAGAAAACGGAGCAGTTCCATTCCGATGAAAAAAAAGTGAAGCGA AACCGTTTCGATTGGTTTTGCCTTTTTAACGTCTTCTTTTTTGACGCTTT TAATTATGACTTTCACACTTGTTTACGGGACCGTTTCGTTACGGAACGAT ACGGAACCGTAATATCTGAACATAGTCTTAGCACAACTTTTTGGACCTAC CCCGGTGGAGGTCCTATAAATTAACCTGTGTTTGTTCGTTCGTCCGTTCG TTCGTCTGTTACCAACTTTTCTCAGGATTGAATCATAGGAATCTTTTGAT TTTTGGTACAAAGGTGGAAAATGGTGGTGGCCAAAATGTGACGGAGCCCG ATTTTCGAGAAAAAAAAATTTTTGGGCAAATTTGGGCCAAAAAACGGCTA AAAAACAGGTTTTTTGGACTTTGTGGAAAAATGGATCATTAATTTTTTTT GATTTTTTGCATGAAAGTAGGGTACCATCATAGGTAAAAGATGGCTCAAG CAGAATTTTGCAAAAAATTTTTGTTGGCTCAAAAAACGCATGTTTATCTA TAAGAATTACTATTAATAAGCATACATCAATGTTCTTAGTCAAATTACTC AATTTTTTTATNNNNNNNNNNNNNNNNNNNNNNNNATGTTTTTTTTGCTC ATGGGGGCTTACTTTTGAAGAATATGTGTGTTTAAGACAGGAAATTTTAG TTGCTTGGCGTGTTCTCATAGAAAAACTGGCCAAATTCGATATTTTTTTA TAAGCACATTATCAATTACTTAGGTATTAGCTTTTCTCGAGATTGGCTTT TTCATTCTTTATGATATTTTGCACAAATATGTATAACCATAAACCTTCGA ATGTGACGGAGTCTGATTTTCAAATAAAAATGTTATTGGGCAAATTTGGG CCAAAAAACCGGCTAAAAAACGGGTTTTTGGACTTCGTGAAATAATGGAT CATTGTTTTTTTCTGATTTTTTGCATGAAAGTAGGTAAAAGATGGCTCAA GCAGATTTTTGTAAAAAAAGAATTTTTCGGCTCAAAAAACGCATCTTTAT CTATAAGAATCACTATTAATAAGCATACATCAATTTTGTAGCCGAATTAC TCAATTTTTTATGAGATAGATGTTTTTTTGCTCACGAAGTCTTGAATATG AAAGAATTATTTCAAGAGCATGAAATCTGGTTTCTAAAAGTTTTTTTTAT AAAAAAACAAACGACTAATTTAAATAGATCGTTACTTTTTGTGTTCTGAA TGATTGTTTAATGGTCACGTCACGTAGATATCAATTATAAATGTGTTAAA TGCATAACCAGGTAGGTCCGTAAAAGTATCACTTGTTCTTTCTCCTTTCG CTTCAGGATTTGCGTTTGATGCGTTCCATCTTATTCAGTATAATTCAACG TAACGATAAATTGAACTTAACCGTCAACCTCGCCAACGTCCGCAAAAATT ATCAAGATGTGTTGGCGTTCCCGCCCTTCCAACCAGACGTCACTTTTAAC GGCCCATCACTCTTCATAACTGGTTTCCAGTCCCTTGAAAAGTTGTAAGT TTTTTAAGGAACAGATAGGTAGTTAGACATGGTGTTTCAAGAGCTGCTGG CATACTAATAGATTCGTGCTCCTACACTATAGGTCTGTGATTCACACTAG GATATTTCAAGAGCTAAGCACCAGTTTGCAGAAATCTTATGTAAATGTAT ACATGTTTTTTTAAGCATACAGGCTCGGAGATGCTTAGTTCAGGGCTTGT CAAGGCAAATGCTTCCAAAGGATGTTTATATCCAAGGCAAAACTTTAGGG AAAATCCGAAAAATTGCAGCCAAAAACAGGCAAAATCAGGAAAATTCATT TTTCATAGGCTTAGGGTAATGCTTAGTACATGCTTAATTTTTGCTATATC TAAGCCTGTATATGCTTTTAAGTGCAATATGCTGATAAAAAACATATAGG ATGGCTGAGTAATTAAGTGACGTAGTCTTCCATACGCTGAAAGAATTTCT GACAATGCTTGTAAGAAAAAAAATATTTTTACAGTAGTGTAAAATGAAAT TACCGTAAACTTCACAAAAAAAATTTCCAGAATGGTTATAGGTATAAATC ACATATTTCCTTACTTTTTAATTTTAGTTTGGGGGATTTTCCATGGGTAT ACAAGCGATTCCCAAGTGCAAAGATCCAATACCTACCAGAACTTGATCGC TGGTTACATTTGGAACGTCCTGACAAATTACTGGAAATTTTCGGTGAGTT TTTCATGGAGAGAGAAGATACGAGCAATGAAAAACGAACAATGTCAATCT CTGGGTGATTGGTGATGGGTTGTTTTTTTTGTCACGTGACCATTTATTTA TGATAGGTACACCCTTTAATCAGACTCAGACTCTTTGTTCTTGTGGTATT TCAAACTAAAGCCGTCATTGTGGGGTTTACACAGCTGGCACGCAACGTTG TTTTAACGTTCAAATAACGTTATTTGGACGTTATGTATGTCACATGGACG TTGTTTTGACGTTGTGTGCCGGCTGGGTAGTAAAAGATATCGCATACGCA AGATTGAATTTCTCCAATATCTTAGGCTGCACACATCCCCTCTGATAAGT TTTGATATAGGGGATGCGAATCAGGCTCACAAAACCGTTCCGAACTTAGC AAAAAATCTGCTAACCAAAAAAAGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069823TCONS_00069823Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069823-proteinTCONS_00069823-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_509supercontigscaffold_509:87080..93905 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.16 18.3 25.91 25.48 11.21 10.91 42.47 43.59 33.89 25.85 33.7 44.42 4.48 3.24 2.76 3.73 22.57 29.89 2.32 2.44 63.6 63.09 53.54 67.63 127.87 101.37 47.81 63.16 36.14 36.75