XLOC_043529 (gene) - C. hemisphaerica

Overview
NameXLOC_043529
Unique NameXLOC_043529
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_511:285053..291729+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043529 ID=XLOC_043529|Name=XLOC_043529|organism=Clytia hemisphaerica|type=gene|length=6677bp|location=Sequence derived from alignment at scaffold_511:285053..291729+ (Clytia hemisphaerica)
CAGACAATTTGCAATCTTTTGAGGAAAGACAACGACGTGCATATCACTTG CTTGCAATCTTTAGTAATCATGAGACGAACTGTTTGCCGATTGGCTAAAT GCGCTCCATTACCAAGCGTAAGTAATTTCTCTTACTTTGAAATGTCTTCA gaagtacagttgacgctctctaattcgatcttcaaggggaatcggatttt catcgaataagggggcttatcgaatagtagaacgtcgtttatgagagttt cttgttgacggggactttaaatttcatcgaataagggagcctatcgaata gtagaacgtcgtttatgagagtttcttgttgacggggactttaaatttca tcgaataagggagcctatcgaatagtagaacgtcggataagagagcgtca actgtatatgtGAAGATTTAATCTGATGATTCTCTCTCGGCAGTACAATA TCGTGAATTTTACAGATGATAAAATATCGGGACATTTGCAGTGTCATTTA TCAGGGCATGAACCGAGAAATAGGACAAGCAAGACATCAATCTCGTcctt taaaaaataaactttaagTAAGATAAGAGCCGCAGTCGATCTTATGAACA ATTCGGATTTCAGattctttacttttgagatCCTATTTTTCAATAGATCA TCAAAGCCAAACTTGTTCCAATCCGTCTTGCACAAATGCCAGAAGAAATC GCTTTAAGATGGATCATCATGGCTGAAACAGCTGCCGAACCAGAACTCCT CACACCACTCATCGAAATCATCAACGATGTGAAAATCCCAACCATCCTTC GTGAAAGATGTATCTTAGCTTTACGCCCATTGTTACCAAGAATGCACACC AAAATCACTGCAACTTTACTCCGCGACATTGTAGAGAAAAAAGACCTCCC CTCTGGAATGAAAGTCTTAATGTACACCGTACTTTTGGAGCGACCAACAC CAATTGTCATTCACACTATCGTCCAAAAATTGATGACTATCGAAACATGT GAATTCAGAAGACAATTTGTCTACGAGACTATCTTATCCTTGATTCACAA CAAAGAAATCCCCATCTCAAGAGAAACGTAAGAACAGTTTTCCTCTCTTT TGAAACTTTAAATTGATTGCAATCTTGATTAGCAATTCGTTCAATGTAAC TTGATGTTGCCTTACAAACGACCTTTGGCTGAATCTAAAACCTGCTCATC ATTAAAACCTGACaacatgttttatttttcagacgCTTGGCATGCCAATA CGCATTGACCGTTCTCCGAAGACAAGAAACCATCTACAACCGTCTTACAC GCCCTTCCATCATCCCAAGCAACACAATGACCACCCTCCGCCCATTGAGC AACGCCAACATTCGATTGACCATGAAAAACCAAGTTCATTTGACCAGAGA ATCATCCATGCCAAGACATTTGATCCACAACACCGAAATTGAAATCTTAG GAAGACGAATCAATCTTTTGGATGTCGATTTACACGTGACCGGACTTCAA CAATTAATCAACAAAATGATTAAGGTATTACATTCATCTATATTACCAAA CTCTTTTTCGCAGAAAATACAGAAACCAAATCGAACGTGTGTTTTTGGGT TGTTAAACAGGCTAACGCACTGTTATCAAACATTAACCTTGAAATTGTCC AATTTTATCATTGGCTAAGCTACAaatatgaatttataatttgcaaaatt tagAGCCTTAGCACTTATTGAAACAAACACGAAGAATCTAATAAAGTCGA TGAAAGAACTTGGAGCAAATTCGATTAACTTTCTCAAATTCCTAACTGGA TAAACTTTATTAATTTGAATATTTGTTTACAGATTACTCCAGAAAAAACT GTCATCNAAATTCCTAACTGGATAAACTTTATTAATTTGAATATTTGTTT ACAGATTACTCCAGAAGAAACTGTCATCCAACCATTGGAAATTGTCTCCA CCATCAGAGTGCTTGACGAACCAATGATGACTTTATACAAACGAGTTCAA CGCAACGAAGCCAAACCCACTTTACTGGAGAAAGTCTTACCAAAAGATTT CGTTTTgtggaaaaatttggctgaagaATTAAACAAAGACTTGACCATGG AGACTGAAAAGGTACTTTGGAACAAATCTTGTTACATCCATAACTTTCTA CAATTGGAGCTTACAAATTGTCTAATCATTATGATACCACGAgtaaacaa gaaaatattttactatAGATTGTGGCATAGTTTTGGACATTTTAGCTATG AATCTTTTTAGGGTTGGAAACTTGGAGCCATTTCAAAAACTCCTAACTCA AATCATTTTATCTATTTTCCTCTCTTTAGACAATGATGCCAGTCGAGCTT TTGATGATTCTTCCAACATCGACTGGTCTTCCATTAACCATGGAATTGAA CACTATCTTGCACTACAAAATGAAGACaaagatgaacgttgaaacaccAA GCCTCTTCGATTTACCGAAACTCGCCTTCCAAGAAAAAGacttgaaattg aaagccaGCTTGAACTTGAGGTAAGAGAAATCCTTTTTATAATATAAacc taaaatcaattttagccATAGCTTACATTTTAATCTTCCTACTCTTAGNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccccccccccc cccccccagaccttattaggaccccccgtttattaatttttaagaatttt tttacttgacaaAAAGAAGTCCCCGTATCTTGCTCCAAAAAGTCTGATTT TAGCCAATATTTACCTTACAGTACAATTTTCCTTTCTTTACAAAAGCAGT CAATTTGCTTTTAGAACTTTGATAACCTAAGATGAGTTTAAAAGATATAT TTCATACAGCTAATTTTAAAGTAAGTCTGTAACTCTATTCTAACTCTAAA GTAACTCTATTCGTCATTTTTCTAGATCAACCTTGACAGCTATCACCAGA GTGTTCATCGAAACAAGATTTGTCACTATCGGATTGAAGAACTGTCGTGA CGTCAGCACCATGTTGGACACTCGAACCAACATGACCTTCAACCCTGAAA CTATGAAGATTGCCAGTGACCTTCAAATGCCCAAAATACCTGAAATTATG ACCACTGAAGTTCACACCGAGCTTTTCATTGAACAACGAGTTGGACCAAA GAAGATCAACAAAGTCATCCCTACCATGATGGAACATATCATGCCACGAG TTCACATCCTTGGAGAACCTCTGAAAACAACTGAAGAATTACACTCCAGA ATCACATTGAAAGTTGGTGAAAAATACATCTCCGTCGATGAAAAAACAAG AGAAGTCATCCTGGCTGAACAGCCAATGAAATGGATTGTTATTCCAAGAC CAACCAATCAACGTTTCGTCGCATTACGGCATCCAACTCTTGGTTACGTC ACTATTGACATGACAACCAAAGCTTTGAAAATCTCCACCGAAAAGCCAAC ATACTTCTTCATTGAGCATCACACTTTGGGAATTCAATTGAAAACCTTGG TACCACGTGACTTACCCACGATCCCCACTTTAGAAGAGTTGAAGAAGCTT CAAAAACCAGTCATGGATTTGGTCATGCAATTCCAATCTCAACAATTGAC AGATGAGATCATTCAAAGATTTGTCCTATGGAGAAACGTAAGGACTTCTT TAAACTATCATTAGTTTCTGCTTCATATCccattctttgtttttattaat tgttGTATCAACTGCAAAGCAGAAAAAAGAACATCAACTACATAAATTGT AATTTTTAGGTTGACCCACAAAAGGCTCTCCAAATCGTCTACGTTCGATT CTTGAACAACAAAGCTTCCATTGCACCCATCAAAGACACTGAATTGTCGA TCCAAAAACAAATCATTGAATCTTCTACTGAACGAATCCGTTGTGAAGCA AGAAACCGTGGAACCTGTTTGACCAAACAATCTCCAATCCTCCCAATCTG TATGTATGGAGTCTTACCAAGACAAACTGTCCTGAATATCGATGCCCTCT TCATGCCAATGCTCTTTGAAGTTGCATTACCCGACCACTTGAAGAAAATC CACCTTGAACACACTTTGAAGACTGAAAACAAATTGGACATCAGCTTGAC CAGAGTacgtttgattttttatatattCAAAGCTTTTGGTAATACTCTTG CAATGAAATAGCAACTTCAATTTTCCTCACAATAATAAATTTAAAGAAGA TTTGCAAtattcaaaaatctaaaaaagaacCTTTTTTTCTCTTCGACTCT TTTAGATTCAATTGATTGGAATGGAAAAAGAAATCAGACTTCGATTGGTT TTGGATGAAGAGAGAATGCCACGTGAAATCACCATTGAACAATTTGCCAA AGGATTAACTCAAGGAAATTTGGCTTGCTTACGACTTGCACCCACACCAA ACTCATTCGAATTTTACATGAGCTTCGATCCTAAATGCATGATCAAACAC GTTGAGGTTAGTATTATTACCACATTGTTTATGAAGTCAAAAATGTGTAA AGACTCAAAGTTAATGGGATATATTCAAGTTAAACAATATATTCAAGTTA AAACAATATATTCAACATTTTAAGCTTTCCGAACTGTTAACAATCAACAT AAAATTTCGAACATCTCTTAGCTTGCTTGAAGAATCAGTTCTGAAGTGAA GTAAAGTCTATAACATTTCACTTTTATCTACCATCCAATAGATCACACCA GTAGCAATAACCAACAAATTGTGGCCACGATTACATATGGAATTCAACTG GTTCGTCCGATTGGAGAAACTTCCATTACCCATCAGAAGAACTATCATCT CAATCTTGCAAACCATCTTCAATCCAGCAACCATCCATGGAATCGAACGT CTTCCTTTGGAGATCACAACCAAAGAAATCTTCCCTGAATCAGAAATCAC TAAAGGTACATTGTCCTTGAGAAAGCTTGGACCAGCATTGTTATCCGTCA AATTAAACTCACCCTTCTTACCAGCATTCGAAATGGAAATTCCAATCTCA AAAAGAATCGAATCCTTACCAGGAATCTATGGTCCAAAAACTCTCACCAG ATTCACTAAACTTGCAACAAGACGTGTCTGCACTCTCTTGAGAGACACGA TGACtacttttgatgatgttgaTTATAAATTCACAATGCCAACACCAAAA TGTGAACAAATTCTTGTTGaaacaacaaaagaattgaGAGGTGTCAAAGT AACCACACAAAAAGCTGGACGATTCCAAATCCTTCGATTGAGAATTAATG ATGTCATTGTTGAAGTTGTTCCTACCAAAGAAACTGTTATTCCAACCGTC AAGGTGAGCTTTTACCATATATAATCTTGTTCTACTTTTTTGACTTGAAC TTTAGTGAGAGCTGTAAAGGAAAACTGTTTAcattaaataagaaaaataa aaaggtcaaaGTAAAGTCTCaacaaatgaaatatttttcttttcttcacc TAGATCAACGGCAAAGAAACCGAAGTCAAACCTGACCAAAAAATAATCTT ACCAAACAAACTTGTCATGATAGTACGATGGGTTGAAGACCTCAGAGAAT TCAGAATCGTGATTAATCATCTTATGATGGAATTGAGCATGAGATCAGGA AACATCATCTCTATTGCTATGGAACCAACTGTCTACATGGGACAAGTTCA CGGTATGTGCGGTCACATGGATATGGAGAAAAGCAAAGAAATGATGACAC CTGAAAAAGTTGCTGTTACAGACCctgaattgtttattttgacttgGTTG AACCCAGCTACCAAATGCACACAGAAAGGTTaggagaaaataattttaaa tttcaacataAAACGTTGACTTTTTTCATGAGAAAAACCTTGATGGTATT CACATCAATTTCAgtgctttttttttaaagtcataCATCCAAACTGTAAT ATCAATGTCCAAAGTGTTTAACTTAactgtttaaattttgaaaaagctaA TAAGACAgaaaaaagatgttaattacaCGTAATGGATGTGATAGTAATAA CCTCTTATAACCTCTTTTATTAGAATGTCCAATGATCCGATCTGTCATTC CAACCGAAGCTGGATGTCGTCCAATCATGGCTTTGCCAACATGCATGGAA AAATGTCAACCCATAAAAGAAGTTCTCATTAAAGAAGTTCCAGTGAAATG CGCTCGTGGTGAACAAAAAATGCTTCCTATGAAAGTTCCAATTGAGTGTC AATGTACTTGCTAGACATTTAACCCATTTTGCCAAACCCAAAGTCTTTTT CTCTAGAAGTGCTAATCTTTTTTTAATACTTATTcaatttatattatttt gtagattttataaaacttatgaaaaactaaaaaaatatttctacagCAGC AAAGTTGCAAAACCTTActgaaatttgaattatttatcATCCTTGAATCa atactaaaaaaaaacaatcaggTTTGAAAagatcgttttcaaaatacACT TGCTATGATTTATAATCTAAATATATGGTTTGCAAACTAGTTGGCCTATA AATTTTGAACGAATTACAAAAATAAGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069894TCONS_00069894Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069894-proteinTCONS_00069894-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_511supercontigscaffold_511:285053..291729 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.39 4.64 12.99 9.17 1.44 1.2 0.83 0.88 0.43 0.36 0.37 0.35 0.22 0.36 0.1 0.24 2.34 1.36 0.08 0.3 74.03 69.14 3771.88 3970.73 74.33 15.63 1100.77 1435.5 33816.2 29748.9