XLOC_043552 (gene) - C. hemisphaerica

Overview
NameXLOC_043552
Unique NameXLOC_043552
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_511:513546..518986-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043552 ID=XLOC_043552|Name=XLOC_043552|organism=Clytia hemisphaerica|type=gene|length=5441bp|location=Sequence derived from alignment at scaffold_511:513546..518986- (Clytia hemisphaerica)
GCTGGTTCTGATTCGTTGAATTGTTCCAAACCTGATCTTGATGGAAATAT TGATTCTTCAAACAAATTGCAATATGAGTTTGGTGGGTACATATAATTCG ATTCCCAAATTATTTCTTTTCATCATTTTTTTTCTTCTTATTTTTAGATG TAAATTAACTGATATTGACCATTACAATATATTTTCAATGTGAAGTTTTT GTTCTTTTAATAATTCATCATTAAAAGTAACTGAATGTTTTAAATTGGTT TTACCAGGATTGAATCTCAGTGAAATTAAGAAAAGTTTACTAGTTAAAAA GGGTTTGTCCTACTTTCAATCTCATTAGATTGTTCTATTTTGTAGAACTA TCAAAATTGAAACTTCCTGCTAAAATCAATATCAGAGGAAGACCTCGTGG CTCACTTCTTACTACAATTGGTAACCGTAGGAAAAGAGATCGGAAAGGTA GATGATAATAATTTTTAGATTGATTTTAGTCATTAATGCTTGCTACCCGT TTTTCTTTTCAAACTACCCATTTTGTTTAATGTATTTTCGAAATTTGTTC TCTACAGTGTGTCTCGTATAAAGCGGTCATCTTTCACCCTATATGACTTC ATCAAATTTATGCGTAATCACCAGAGAGAAGAAAGAATTGTTTACAAGTT CAAATGTCTCTTAAAACTACAGTAATGACTATAATTATACTGTAATTCCC AAATGTATTCTAATTTCAATAAGAAAAGAAAAGATTTTTCAATCGAAGTT TCATTAATTTTGAGCATTTAAACATGACATTTTTACTAAGTTACTTTTTT TAACCTAAACACGAAACATCGCCCCTTAGTGATAAAATTAACTGTATAAA TTAAAAAGGATTTTCTTTATATACTTGAACTTTACCGCTTTATACGGGAC ACACTGTATACATGTATGCTGTTTAATTCTATGGAACATTTTCCTTTGTT CTGATATATGTTGAGACACTGTAAGAATTGTGGCTAAACATTATCCTATC ATTAGGGAATGCAATTGACAAGAAAAATAACAAGACGAAAGAAACCAAAG AAAATAAAACACCTGTCAGTAAAATACAGGATGTCGAGGCCATGGTATGC TCGCCAATTCTATTTTATTTTTGGAAAGAATATACGTATCGAATACCAAA TTAATTTTAATAATTCCGATGATAGATCCAACATTACACCTTAACATTTG GAGCATTTTTCTCTCTAAGGGTTATTAAAAACCAACCCTCCCTGAGAATA AAATCTTTTACTGTTACAAGGGTTGATAGGGGCAGTCTTCATTTTAATTT TTCATAATCTTCTGTTTTAGGGTATCAATCCTGCTAACAATCAGAGATTC ATAGAATTTTATCGGTATATTATAATTATCTCTACCTCTCTTTCCTATCA AAATCAAGATAGTAAGGGCCTATTTGTTTCATCACTATTTCTGCTACATT TACTGTAAGTGCTCTCATTTCAATTTGTTCTGTCCAAATCTGTTGCACTT CTTGTAAATAAACTTGCAAACTCCCTATTAGCAAAAATAGTAAAAACTTC AACCTTCTGCAAGCAAAGCAAAATCGCAATTTCTTCACAGTAAAAATTGC ATCTAAAATCAGACTGGATGATGTTTTCTTAGCCTGATTGCCGATTTTGA ACCAATTAAATTAAAGAAGTGAAGAGCTGAAACTGTAGCTTGCTCCACGC ACAGGTCTATATCAAAATAGAAGTTACTTTCATAATGGCGGGATAGTGGC CACACAGCTGAGAATAAACAATGGATCCAAAGTTACTTTTTAAAATTCAA AGCACAAAACAAAAGAAAGTCCGAAAAGATTCATTCTGACATCAAAAATC TTGAAGTAACAGACGAAGTGATCGCAAGTAAAATATGCTATATTTCGTAT TCTATCTAATACATCATTCAGGCAAAAAGTAAGTACAAAGAATAAAAGCT TCTACCGGGTGCGCCACAAAAAAGTTTCTCTCTTTAAAAGTAATTTTCTT GAAATCTAAACATTTTAAAAGAACCATTCCTATTTTATTGGAAAGAAGAA GAATAAACTTAAATTTTGATGGGTCATTTATTGAATTCGATTCATTATAT CAAAAGTTATGCTCAATTGAATAAAAAAGTTACTTTTGGAAAGTGCTCAA AAACGTTAAAAATCGACCTATCAAATTATTCAGAAGCATAATTACATGAT ATATCAGTATTTTTGTTTCAGTCATTAAAAATGATAATTAGCTGTCTTAA TGACCTTTTGTTATTAAAGGAAGGTTGAATTTAAATGGAAGGAAGAAAAT TCGTCGAAATAGGCCAAATAATCTGGTAGAATTCAGAAAAATACATCAAA TATGGGTTTCGAGGTAGATTCAGCCTTACATAGACTTAATCCAGTCTAGA ACCAAAAATCTGAGGAAAATTTCGGTAAAACTAAATCAAATTAATCTTGA TGAAGATTTTGAACCCTTTCGACCCTTCAGTTTCAAAATTTCTGTGTTTA GTTAATGAAAAATGCTCTTAATCATGTAAAGGCTATTGCGAATGCCAAAT TTAAAGTAAAAATTTGATAGGTCGATTTTTAACGTTTTCGAGCACTTTCT GAAAGTAACATTTATATTCAATTGGACATAACTTTTGATCTAATGAATCG AATTTAATAAATGACCCATCAAAATTTAAGTCTATCTTTCTTCTTTCCAA TGAAATAGGAATGGTTCTTTTAAAATCTTTAGATTTCGAGAAAATTAGTT TCAAAGAGAGAAACTTTTTTGTGGCGCACCCGGTATTTATATAAAAGTTC AAGATTTTTGATGTTAGAATGAAGCTTTTCGGACTTTCTTTTGTTTTATG GTTTTTAAAATGATCGGCTGGTTATGGATTCTGAACCAGGGATTATCAAG ATGGCAGACAACAAAAGTTGCAATATTTGCTAGCATTTTCAAAGTTTTCA CGGACTTCATAGCACTTTTAGCAGATAGCATCTACAGCATTTAAAGTAAG TGAAACAAATAGGCCTTAAATATCTCATGTATTAAGGATTGTTCATGCTC TGCCTCAGAGCCAGAGCTTTCTTGTGTATAACGTATACCAAACCAAGTTG CGGACCCCAGTAGACTATTGAAAAGTAGACTAGTAAACCACCTCTGCGAT TACAATGCACGCTCACGCTATTGCAGGCAACTACGTTAGCTTAAATGTTT TTCCAACCACTCCCGCCATGTATTTTATTTTTTTATAAGAATATTTCCTG TCCGTGCGCTTGACTTTATAAGCACGATTCTCGCGTTTTACGAAAAACTG TTAAAGGGAAAAACTATAGCAAGGTTGTTAAAGGTATGCATGTTATTTGA CAGACAATTTTGGAACTTTTTTTCTGAGTAAGTAACGTGGAAATGGCTGA TAGTTTTAGTCTGTTCAATATCTTTAACTATAGCTCTTCTGAATGGTATA CAACTATTTTTGCTAAAAATTATTTTAGTGAATTGGAATACCCGGATCAG CGTTCCATCATTCAGGTACCTGGAGATGGTCATTGTCTTTTGTATAGCTG GGTAATCGCCCTTCGTGCATCAGAGAAGTCAGGTATCAGACCGAGTTACG AGGAACTAAAGGCAATGTTGAGGCAAAGCTTTGCATCATACTATGGAGAA GAACATCGAGAATTCATGTGTGACCAAGAGGTACGTTATTAACAGTATAT AATAAATAAAAACTAATAGCTGTTAGGCGTAAAATCTTTTGTCAATTTGT CAATCAACACCAGTCTTGTTACTTAGTTCCTTAAGATATAATTAGCGTGA AATTATTAATCTTAAGCTGACTTCACAAATTGTTTCATATAGGAAAACGT AAACCTTCAAGACGAACTTAGTGAATTCATCGATCGAAAAAACTATGGCC GTCAAGTTGGTGATGAGATGATAATCAATGTATTGGCGACCATTACTAAA GTTCGAGTTGGCGTTTGGCAACGATAATTAGACAATTCCTTTTCTTTAAT TGTATATCGAGAGCCACTCAAGAATGTTGCTCCATTAAATGGCAAAATTC ACCTTCATAAGATGGGCCAACACTACGAACCCATCGTTGACATTAAATTT AAAGGTAACGGAATATTTTTTTCTTCATATCTTTAAACAGTGTGTGCCTA TTTTACATACTTCCTTCGACCCGCCTTTAATGGATTTTTCCTAAAGCTTT TATATTCGATGCATGGTGCTGCGACATTTGGTATGTGTAATTTTTATTCA GAAACTTCACAGAGACTCTCAAGAACACATGGCCTGTCTTTACAAGAGCT CCAGCTTCTTCGTGAGCAACAAGCACAAGTATGGTTGGAGAAACATTCGA TCTCTTCGGGACAGTGTAAGATTAACATATCTTGAAATGCTACCAAATAA AGTTCTGCGCATCTAAAAATTTAAGACTTACTTTGTATTCTTTATACCTG AATTAGCTTAAGATTTAGGATCTCAAGATCTCAAGAATGAATTAATAGAT TTCAGCCAAAATCTACATGAAACAAAAATTGATATTATGTTAACATCGTG ATATATTCTTTCTTAGTTCCTTCAAATGTTTCAACAGATTCACAAAAGAA AAGAGATGTTACTGGTATGTTGAATTAATTTATATCTGGTCTGATGTTGG TAAAATTATGCAATTTTCAATACTTTAACAGAGGTTTTGCACTTTTTTTC AAAATAGAAATTACTACTTAGTAGAGTCAGCGCCCGAAACCAACCTATTT TCTTCAAAATTTTATGCTCTTTTAACGGTTATAATGAGAGTTCCTGAAAA GGCTTAGTTCGGGAGATATGACCGGTTGGAGATGGTACCGAATTTTGGCA GTAGTACTTACAATGGGTAATGAATAGGATTATGAGAAGAAATTTTGGTA AAATTCTACCTAATCCGCAAAATTAAGTTACCGCACATGTTACGGACTTA ATTGTGTTGTTTTGACAATTAACGCGAAGTTAATCGACTGGAGAATCGAC TTATTGTTTTAATGTTCTTTTGTATTNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNGATGTACACAGACGCTTGACTGCA TTTTCTTGTGTGAGAAGTTTGCTGTTTTGGTCAACGTAACAAGTGGTATT TTTGCTCCATTGACAGCACAATTTATCATAAGAGGATATGGTGAAAGATT TTATACAACAGCACAAATTCACACAAAAACGTGGCAATCTTTAAATAGCA GAATGCAAAATTAAATGTGCACAAAAATTTCTTTTCTTAAGGTATCTTCA AATCTTGTCCTTCCTCCTATGATAAAAGTTGATATCATTCTTTTTTAGTG AGCTGCAGCAGCAACTACAAGAAAAGAAAGATCGAAACGGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069969TCONS_00069969Clytia hemisphaericatranscript
TCONS_00069968TCONS_00069968Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069968-proteinTCONS_00069968-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_511supercontigscaffold_511:513546..518986 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.24 0.24 0 0 0.65 0.34 0.18 0.49 0.41 0.33 0.93 0.24 0.43 0.54 1.35 0.3 0.49 0.68 0.58 0.15 0.78 0.69 0 0.05 0 0.23 0.5 0.27 0.36 0.21