XLOC_043596 (gene) - C. hemisphaerica

Overview
NameXLOC_043596
Unique NameXLOC_043596
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_512:282337..293060+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043596 ID=XLOC_043596|Name=XLOC_043596|organism=Clytia hemisphaerica|type=gene|length=10724bp|location=Sequence derived from alignment at scaffold_512:282337..293060+ (Clytia hemisphaerica)
aaagatctttgttttggtgttgtAGGAGACATAGGTGGGATGCCAAAACC
ACCTTTTCAAACGACGGCTCAAAAGAAAGTTGCTAATCTATTGGCAAAGG
TATAAATTGTTATAGATGGTCCCTCTCACAAATTCTATACAGTTCCTTTT
AGATTTCTATACAGAGCTGtgttagggggggggggggggatttgtAAAAT
TGCTCGATTTTtgtagtcaaagcacttgttatacattatTAGAAATCTAA
GGgataggggaatcaaaataacttgggtgccaattttttttcagagactt
tgtgtgatttttggacaaatatgacggaaaaaattatagggtcaaaaatt
aatgaaaattttagcttgagaaaatagaaacctgttgtatatttttggaa
agctctcaaaaattaaGATATATTGCGACTATacgtgatttcagtaccta
actcgagatattgagcttcaaaaagtaaaaactggacaaaacagctgttt
ctggctgaaaaacactgtttttaagggtcaagcgaaaatcgagcgacctc
aaaaaaaacgaacaaattcccCCTGCTATCTGTGAGGTTTGATACTTTTT
CCTGTATGGATGCTTGGCTTTTATATACTTGAAATCTGAGGATGAACCAA
AACTAGAGCTTGAACCTCTTTAACTCAgctgtctccttaactcaaaaaaa
aatcttgatacacccgggggtacttaggcataaatgggtgctgggtatgt
gcggacggtaaggatCAGTTTTTTCACCCTTCAAagtttctctaagggtc
acaaaaatcagaaaaattcaaatcagTCACTCTAAGAGTcggaaaattca
tgatttttaagaaatattttcaaaaaagtctctctaagggtcacctttac
AACAAAAATCAGTCTCAGGTCAgtttttggaggtcccatcCACACATACC
CCTCACCCGCCAACCCTAGCAtgaccctagtaccccccccgggttgATAC
TAAAttactttaaaatctttaacaTAGGCTACTTGACGTTAAAGGTTAAG
TGTTACTTCAATAGTTCTCTACCAAGTGTGTAAAGCAAAAATGTTCATTC
TGAAAccgtacacattttttataagaacatccaaagtttttgaagccttc
agatgttcttaatcttttcagttctaagcctaaaaatgttcttaaaatgt
tccctATTTTTACCATtctttgagtatttttgtgctatttcctaagaaat
ttggtgaTTTAAAGCacgaagctttaaaatgttctcaacttgttcttaat
atttttgccatcgaaaccttatgttcttatatagtttgttcttataataa
tTAATACATGTATTACAGGTTATTGAGCAGAATAATTGTCAATTCATTGT
GGGTGTTGGTGATAATTTCTACTTCAATGGTGTTAAAAACGTAGAAGATC
CTCGATTCTTTTGGACATACGAGCGTACATACTCGCATTCAGCATTGAAA
ATTCCCTGGTATATGATTNACATACGAACGTACATACTCGCATTCAGCGT
TGAAAATTCCTTGGTATATGATTGCTGGCAATCATGATCATGCTGCCAAC
GTTTCAGCTCAAATCGCATATAGTAAAGTATCTAAACGGTGGCACTTCCC
AGATTTCTTCTATAATAAGGGTAAGGAATCCTATTGTATGCGCTATTGCA
TTGTCTTCTTCATTACATCACCGActcaatagctgattggttgtaaatga
cgtaaaatcagtcaatacgtcactttcgaccaatcagctgtttggtACGT
TGCAATGATGTATATCATGGCATGGGTTATATTGTATTTTGAAGGTCCTA
AAATGCTAACTAGACATGAAGGGAAGCTTTTATATgattaaaacatccaa
aacttttgaagccttcggttgttctcaactttttcagtttaaagcctaaa
aatgttcttaacatgttcttattttgaccattttgtggaTCCTTTTtact
attttcctaagaaatatgggactagctggagtttttacaagctcttacgt
gatttggttggtcgttaagatgtcaTAAAACGatgttattactttttcta
aagaacgcgtcatttctataatttcaaatgaccaattagtgaagtacctt
ataaaaactccagctcatcccagaAATATGgggtttttgagtccacaaag
ccttaaaattttcttaacttgtttttaacattttggctatcgaagcctta
tgttcttatatagtttgttcttataaaaaacctgaTGTGCCATTGCattg
tcttctgacattacatcatggactcagtagctgattggttgtaagtgacg
taaaatcagtcaatacgtcactttcaaccaatcagctgtttggtccgtgg
aagacattgcaatggtgcatatcatggattCTATTGTATTTTGAAGGTCC
TAAAATGCTAACTAGACATGAAAGGAAGCTTTtgtatgatttatttttgt
agaATGAGATTTATTGTTGAGACAGGGATATAATTAAGTTAGTTTAGACC
CTATAGCTTTTCTTCGGTCCAGTAGGGAAATGATCTCAACGTACAATGGA
AAAGAAGCACTTGATATTGGTAAAGAATGTAAAATTGTGGCCATAATTCC
TTTGCCGCTATTATCAACATGATGTTAGTTTTTCCGGTCCGGTAGAAGCC
TTCGACCCAACAAGATTTATAATTGCTGGATAAGATTATTTGGCACTTAA
AGGTTCATAAGTCTGTAatcaataataataaaaatagtaATAACAATATT
GTTTTACAaattcgcaggccaccgtgcggacacatgggcctctatgaatc
gctcatacattttgGGTTAATTATTTACATTGTTATAGTATAGACAGgta
tgcaacaatagtgacacTTTCAATCATATTCAAAATCTTTTGCTTGCCAG
GCCACACTAAGAGTCTCTTTAAATTCTTCCACTGAGGATGAGTTGACTAC
TTTTGAagggcatactggagaagtgggacgtgggacggtgggacgctcag
gtgggacgctcgagtgggacgctcaggtgggacgctaaggtgggacggta
gtgggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATCATTCGAA
TCAGAGGGGTTTCCCCAGAAACACGATTTTGAATtcgaatgaaaagaaaa
cattctaattGTAATAAAGGGCTTTCCCCTCAGCATGAGTGGCACGGTAG
TGGAACGTTCTGACGTTCAAGTGGGACGCTCTTTTATTAGaatattgtct
ttttgtctttataattatttaatgaaaaatgtgAAATCAATTTCTGGCTC
CTTTTCTTTTGGTTTGGCTAGTAATTTATAGAACACTACTGTAAGTCTGC
GATAacgtatttcgaaaaaaaaatgatgcacaaacaaatgaaaataaaac
caaaaaactcaataaaaatctaaaaacaactTTCAACGATGGACACGCga
gtttaaaaatctttagcctagtcaacttcaaaaaatttgatgaaagaagT
TTTGGGCGCCACGTGTATGTTTCACCTCACGGGTTTTCCCTTTCACGTGA
ACAATGTGGATACTTTTATTATTCATGCTGATGGTGTNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTTTATATGATACTCTTTAAAATCAGTTCTCGCAGATTTAGA
CATTTAGCCTCTAGGCTAAAAAGAGCGTTAGAATTGTTGAAATtgctctg
taaattacacacttGAATTACACAAAAAGAGCCAAGAGGAGGAGCCAGAA
ATTGACTTATCTGGCTGACTAGCTTTTTGTGCCTTTGTAGCTTCGATCAA
ATtgattatgttattattttataatccattcactatgaaaaaagtcaaaa
acatttcgaTCGATCTGTGTATTGTTTATAAGTNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNCTACTAATTCAGAGTCGTGCGTTCTCATAGG
TCTCCCTCGCTGGTTACATTTCTTAGGGATGCAAGATTTGTCATAGTAGT
TTAGATGTTTAAAGATCTCAACCACGTCACTTACCACGCGTCTGTATTTT
AGACTAGTTATTCCGATTCTTTGCTTTCGATTTTCATAGCTTAGCTGTCC
ACATGTCTCAACGTTTTTAGATGCGCGTCGCTGAACACCTTCTATCAATC
TCGCGTGTTTTATCAGTTTTGGTGACCAGATAACCTGGGCGTATTCTAAG
TGTGGTCTGACAAATGTTACGTACAGTTTTCGAGACAGTTCTGGAGTGAG
GTACGTGAAGGTCCGCCTGATAAGACCAGCCATTGAATTAGCTTGGTTTG
ATATGTGTTGGTCAAAGGAGAGATTCTTATCGATGATAACACCAAGATCT
TTTTCGAATGATACACGTTCAAGGATTTTATCCCCTAGTGTGTATTCGTG
TACATGTTTGATATTATTTGGCTTTCCTAGGGTTAGCACATGACATTTGT
TAGGATGAAAAGTTAATAGCCATGTTTCGGACCACTTTTGTAGTTGGTTG
ATATCGTTTTGTATTACTAGTGCATCCTCAATTGATTCCACTTTATTGAC
GAGTTTggtgtcgtcagcaaaaagGAATAGTTTTGACTTAACGGAATCTG
GTAGATCGTTGATATAGAGAACGAGGGTAGGCCCTAGGACACTACCTTGA
GGCACTCCACTGAGCACTGCTTTTTGCACCGATTCAACTCCATTTACTTT
GACATAATAATCAAGACAAACCATCTAAGCTAAAAGCTTCACAGAGTCCT
GAGAGAGCTCATAAGTGTTTGATGGAAAATAACATCGACAGCTCTAGAAA
CTCTCCATAGAAAAATTGTGATTTTGATAAGCGCTTAACGAGTATGTCTA
TGTTTAGTCAGCAATTGTAGATATtagtattttgatttttattcaaatgc
cagtaattttcaaaatgaattggGGATGTAGGTTGTTTGTGTCTCTGTTG
AAAATTTCAGTCTTTTTTGTTCTTTACTAGTGTTCAAGATTCCAGATTCA
ACGAAAACATTGGAGCTTTTGATGATTGATACAACCATGTTATGCTGGCA
TAGCAAGTGAGTTCATTGTTCTTTTACATGTCTACACCCcctccccttct
cacagacccggtaggatNCTGGCATAGCAAGTGAGTTCATTGTTCTTTTA
CATGTCTACACCCCCTCCCCTTCGcacagacccggtagggttttttcagc
cagttgggGTAAAAAAATTGGACCAAagctcaatggggattgattttttt
tatggctggggatttaaattctattgttttcaagtcacaaaaattcagtg
gggaggggaaaaatagcataatattttgcagtgaggattggtttttttta
ttattttcagcgaGAACAAAAATCAAGTATATTtgtccactggggacgat
attttggccgattttttcagtgggaaggggttccagtgggtctgtgagaa
ggggatctATGTCTGTCATTCAAAACCTTAGACAGCACTCATACAAGTCA
AAGGACAAAATAAATATCAGACAAGAAATCCAGTTTTTGTACAGTCTTTC
TCTAGGACActataattttgattgtttcacaGCCCCAATGAAAAGTtctc
cctcagtggggataaaaatttctattgaaatcccaaagGTGATAGAAagt
ctattgttccaaggtcaaAATATCCAGTGATGATGGCTTTGGAATgtaaa
ttttaaacattgaatttcaaatggggataaaatcaaagtcaatttcccgg
tggtgctgaaattctagggtttTTCCCACAGGAGACGAAATTATTGCCAA
ATTTTACAGTGTGGTTGGGGTCACAGCGAGGCAgtaggtctgtgacacag
gggtgttcaaATCTTATCCGTTCAAGTTCTTTTTCACAGAAAGTCAAATT
CACCATCACCAAAAGTACAATGGAAATGGATAGAAGATGCTCTCAAAAAT
TCCAAGTAAGACATTTGAATTCATCGTTAGCaatttagatttataaagcc
cgaagggctagatgtcgtgctttggctgaaaggtgtgccgaggttaggta
ggaaatcctacctaggtaacgtgacattacaatagaattttagcGCTTGa
tcaatcagaagcttcgcaggtttttgaaaactatcagcgatattttttgc
gatattcacttttttttgcttggaagagcttaaagcacgacatctaggcT
TTACTGAAATCTGTGGCTATAAAGTTACCCTGCCAGATTTtatcaatttc
taattttctcCCTTCTCATTTGACCAGAGCTGATTACTTGGTGGTCGCAG
GTCACCATCCAATGTACTCCAGTAGTAACCATGGTAACACAAGATGTCTT
GTGGACCGTTTGAAACcgttatttgaaaaatattcggTCAACGCATACTT
TAGTGGACATGATCACAACCTTCAGGTAAGAACCACTGACCTTGgctaag
caaaatctttgatcaggatgattttttgaaagtggtaccttAATGGTATG
CTACTCAATAGTGGTGTAAATGCATGGAGAGTGCCACATATTTTCACTGG
AATACTTGTGATGATGAAGCGCCGTTAAACGTTAacttttaacattgcaa
tggcttctttgcggagACCACATTCAAAAAATCTCCGATAAAAGATGGTG
ggtatagcttggtccagggtttataaaggtcagtggtgtAAGAACCACTT
TCATTcagaaactaatttttgcgattttgagcgtgaacttatttttcaaa
tacaATTCGTTGAAGCTTCAAGGAAATTGCCTGAAATTCACGAAAAATCT
TGAACGCAGAGAAAGTGAAtttaaaattaatattttcattgttgGATCAA
TCTTACCCATTCTACAACAATAAAAACTTCAATTTCGTACGCTTTTTCGT
TTTGACGTCTTTGCCCttgattttcataaattaaAATGAGAAATCCACAT
TTAAAAGTCCTAAAATCGCTATTCGAGAGCTGTTGTCAGTTGAATGGTGT
CAGTTATTACGGGTATTAAATGTtgttattctttttcaaaattttggggT
TCAGAGCTCTGCCAAGGAAACAAGAAAAAGGACCCTTTGACGTCACAGGG
TTGAGATAGATTTTGGCACTTTTGACTTTTCACAAgttgaacaatttttt
tcttaacaGGTCTGTCTATATTTTCTTGGACTAAATTAACTGGGAGTGtt
taatttttggaccttttGAACCTTCTCGTATGGCATCTTAATTCTTGTAT
ATGTTTGTTTACTTTCCAGCATATTCATGAAACAGATTCAGAAGTTCATT
ATTTCATCAGTGGCAGCGGAAACTTTGTTGATCAACGTTTCAATAACCGT
CACAATTTACCCTTGGGTAGCTCCAAGTAAGTCTTTCAGCTTGTTGCCAG
TGggccattttatatccatacagggggggggcgAACATTTCCTGAAGGGT
AACCCAAAAACAATTTCCAGGGGCTATaagaaaaggttttttttaatttt
tgcattttccagggggtatccctGAATGGGTATTAAATGTAACAGCCCTT
ACCGCTTTTATGACCGTTTATTAAGTCGGCTTGTACAGTTTtgccaaaaa
gaaaagaaatttttagaaatgtataaaaaacaacattttgggAGGCTCTT
TGCCTCAAGTCTGAAAACGAAATAATTTAAGCTATGAGCATTTGatgtag
gggggggggtactaaaACCTTAGTACTAAAAggggttttgagaatttttt
gcatACCAATTTTAGAGAACTTTTAGGGACATTTTGGCACAGAGACCACC
AACATTTGGTCTTCTCAGGACCATTTCTCTCAAAAGTTGCTACCTTTAAA
CAATGCTGCTTTAATTTtactgaaatttcaaatttcgttttgaaaaattc
tgaaaaatcacgaatttttttgaaaaagattcaaaaaacgATGCAAATCA
CTAATTTTAGTAcaaatcttaaattttagtcTGGATAccacctttttggt
attttaccCTGTTGTACTAAAAGAATTTTAGAGTTTTTTGGgtataccac
cacgtcactaaacatCACGATGTCCAAGATTTTaacactgaccccccccc
tgtttgATGTAGGGTTTTGCAAGAGCTCAATCTCAAGATTCGTTATTTAT
ATCTCTGTCTGTTACTTTTCTTTGGTCAGATTTGAATATGCTGAGAATTG
TGGTTTCAATTTAGTCCATATTACAAAAGACAATATGAAACTAAAGACAT
TTACCGTCGAACCTGGCAGAGATTTGGGTTCAAtatatgacgtcatcatg
aaTCCAAGAACagtatcaaaacaatcaaatggtTTAGAAGATaatgacca
atcaaatttcatgTTGATAAATAATGACGGTGGGAACCAAATTGACAGGA
GTACAGACATTGAACATCTGACAAAGTCCATCAAGAATGATAAATCAAGA
TCGAATCTTCAAAACGAAAATCAGAATTTCGGCTCTATAACGGAAGCTAC
AACTACGTCAAACATTCAACAAAAGTTAGCATCTGACGACGACTCTAAGA
GGACTAATAAGAAATATTCCAATGACGCGCCGATTGATGAAAAACCAACT
CCAGTACCGGCAACATTAATCGATACTAATAAACTAACGATCGATAATTT
AAGCGATATTCCTTTATCAAGTTATAGTAATTTATCACCTTTAATACCGA
TTGAACAGGGTGAATCGATGACGACAAAATCATTAAACAAAACTGGgaat
aatttgaaagattttatacTTGAACGCTTACCGGTTCAAAAAGTCGCCAA
TAATAAGAACCTGAAGCAAAATAGAACTAGTACAACTACAAAGAACAATC
CATCTGATATTCTACATACGAACTCATCCATAACAAGAAAGCGACAAGAT
AATTCATACTATCAAAACTCAAATTATCTCTCTAATATTCAGCCAGGATA
CACTGGCTATAACCTACAATATCCAGTAAACAGTTATTACTACCAGACAT
TGTATCAACAGGGATTTCAACCGCAGAGCCAAGTTTATAATTATTGGGGA
GCTAATAATTTACAATATCCGAGTGTTCAAATACGACAACCAAGCACTTA
TCTCTATCAACAACAATCTGGTTACCTAAGTTaccagcaacaacaacaaa
aatcgTTACCGTCTGAAAAGACTAAACGTGAAACAGTCGTTGTGCCCGTA
TCATCAAATCCGAAAAACGAAATgttatcaaattttttcgaaaaacaaaa
ttcaaaaacagcaaatgtCAAATC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070026TCONS_00070026Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070026-proteinTCONS_00070026-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_512supercontigscaffold_512:282337..293060 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.44	0.72	0.22	0.17	0.03	0.07	6.66	7.13	2.79	2.21	3.16	2.68	7.84	5.26	3.34	7.34	5.82	5.3	0.39	1.16	2.99	2.43	2	2.13	5.03	7.16	0.72	0.22	0.19	0.07